Contig 007029:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006N08Sequence522007029 (2)gb|KHN00422.1|7e-23Phosphoserine aminotransferase, chloroplastic [Glycine soja]
JMSF019F15Sequence456011771 (3)ref|XP_004232556.1|7e-36PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Solanum lycope753007029 (2)ref|XP_011079115.1|2e-119PREDICTED: phosphoserine aminotransferase 2, chloroplastic [Sesamum indicum]

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+                                               GTCGCCGATATGTCGTCCAATTT
                      ____________________________________________________________
consensus                                                  GTCGCCGATATGTCGTCCAATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          CTGCTCCAAACCCGTCGACGTTACCAAGTTCGGGATCATCTACGCCGGCGCGCAGAAGAA
                      ____________________________________________________________
consensus             CTGCTCCAAACCCGTCGACGTTACCAAGTTCGGGATCATCTACGCCGGCGCGCAGAAGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          CGTCGGCCCATCCGGCGTCATGATCGTGATAATCCGGAAAGATCTAATCGGCAATACCCA
                      ____________________________________________________________
consensus             CGTCGGCCCATCCGGCGTCATGATCGTGATAATCCGGAAAGATCTAATCGGCAATACCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          ACCAATCACTCCTATAATGCTGGATTACAAGATCCACTCTGATAACAATTCGCTCTACAA
                      ____________________________________________________________
consensus             ACCAATCACTCCTATAATGCTGGATTACAAGATCCACTCTGATAACAATTCGCTCTACAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          CACTCCCCCTTTCTATGGGATTTACATGTGCGGGCTAGTTTTCGAGGATCTATTAGCTCA
                      ____________________________________________________________
consensus             CACTCCCCCTTTCTATGGGATTTACATGTGCGGGCTAGTTTTCGAGGATCTATTAGCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          GGGAGGATTGGGGGAAGTTGAGAAGAAGAACATGAAGAAAGCTGAGATCTTGTATGAAGC
                      ____________________________________________________________
consensus             GGGAGGATTGGGGGAAGTTGAGAAGAAGAACATGAAGAAAGCTGAGATCTTGTATGAAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          CATTGATTCCAGCAATGGGTTTTACAGGTGCCCAGTGGAGAAATCTGTGAGGTCTTTGAT
                      ____________________________________________________________
consensus             CATTGATTCCAGCAATGGGTTTTACAGGTGCCCAGTGGAGAAATCTGTGAGGTCTTTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          GAATGTTCCCTTTACATTGGCTAAACCAGAGCTGGAAGGTGAGTTTATTAAGGAGGCTGC
rJMSF006N08+                                          TGGAAGGTGAGTTTATTAAGGAGGCTGC
                      ____________________________________________________________
consensus             GAATGTTCCCTTTACATTGGCTAAACCAGAGCTGGAAGGTGAGTTTATTAAGGAGGCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          TGCTGGGAAGATGGTGCAGCTGAAGGGGCACAGATCAGTGGGTGGAATGAGGGCTTCCAT
rJMSF006N08+          TGCTGGGAAGATGGTGCAGCTGAAGGGGCACAGATCAGTGGGTGGAATGAGGGCTTCCAT
                      ____________________________________________________________
consensus             TGCTGGGAAGATGGTGCAGCTGAAGGGGCACAGATCAGTGGGTGGAATGAGGGCTTCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          TTACAATGCTATGCCTTTGGCTGGGGTTGAAAAGCTGGTTGCTTTCATGAAGGATTTCAT
rJMSF006N08+          TTACAATGCTATGCCTTNGGCTGGGGTTGAAAAGCTGGTTGCTTTCATGAAGGATTTCAT
                      ____________________________________________________________
consensus             TTACAATGCTATGCCTTTGGCTGGGGTTGAAAAGCTGGTTGCTTTCATGAAGGATTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF019F15+          GGCAAAGCATGGTT                                              
rJMSF006N08+          GGCAAAGCATGGTTAAGGTCCTTTTTCCTATCTGGCTTTTTGCTTCAAGATTTTAGCTTT
                      ____________________________________________________________
consensus             GGCAAAGCATGGTTAAGGTCCTTTTTCCTATCTGGCTTTTTGCTTCAAGATTTTAGCTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006N08+          CTTTTCNTAGCATTGTTCTTTGGTAATTCTTCTTTTTTATGTTATGTTGGTTGGTCTATT
                      ____________________________________________________________
consensus             CTTTTCNTAGCATTGTTCTTTGGTAATTCTTCTTTTTTATGTTATGTTGGTTGGTCTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006N08+          TGGGTAGAATCGAAACTCTTATAGCTCTGGAAACACAGTTGATGATAAGAATGAATTCAT
                      ____________________________________________________________
consensus             TGGGTAGAATCGAAACTCTTATAGCTCTGGAAACACAGTTGATGATAAGAATGAATTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006N08+          ATCCTGTTCTTTTTCCATGTTTAAGATTAAGACAGGAATCTGCANCCATCTTTGTGATTG
                      ____________________________________________________________
consensus             ATCCTGTTCTTTTTCCATGTTTAAGATTAAGACAGGAATCTGCANCCATCTTTGTGATTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006N08+          ATAGAACTTTGATATTCATCAGGTTTGCANAACTTTGTGTTAACAGTATACCATTTGCTT
                      ____________________________________________________________
consensus             ATAGAACTTTGATATTCATCAGGTTTGCANAACTTTGTGTTAACAGTATACCATTTGCTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF006N08+          GCTTGAGTTAAGGTATAAGTTTCAGTGTGGTATAGCTCTACACTGCTTACTACCGNAAAT
                      ____________________________________________________________
consensus             GCTTGAGTTAAGGTATAAGTTTCAGTGTGGTATAGCTCTACACTGCTTACTACCGNAAAT