Contig 007026:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005K17Sequence391019906emb|CDO97637.1|3e-32unnamed protein product [Coffea canephora]445007026 (2)ref|XP_009623763.1|2e-56PREDICTED: non-lysosomal glucosylceramidase-like isoform X2 [Nicotiana tomentos
JMSF005K19Sequence311016684ref|XP_009591767.1|4e-51PREDICTED: protein VAC14 homolog isoform X2 [Nicotiana tomentosiformis]421007026 (2)ref|XP_009623763.1|9e-49PREDICTED: non-lysosomal glucosylceramidase-like isoform X2 [Nicotiana tomentos

Alignment

This contig is upended


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rJMSF005K19+                                                     GGCATGATTCACGAAGA
rJMSF005K17+                                            GTTGCTGCAGGCATGATTCACGAAGA
                      ____________________________________________________________
consensus                                               GTTGCTGCAGGCATGATTCACGAAGA
 
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rJMSF005K19+          CATGGTTGATTTGGGGCTTAAAACTNCCAGTGGAGTCTATGAGACTGTATGGTCTGAAAA
rJMSF005K17+          CATGGTTGATTTGGGGTTTAAAACTGCCAGTGGAGTCTATGAGACTGTATGGTCTGAAAA
                      ____________________________________________________________
consensus             CATGGTTGATTTGGGGTTTAAAACTGCCAGTGGAGTCTATGAGACTGTATGGTCTGAAAA
 
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rJMSF005K19+          AGGTTTNGGCTACGCTTTCCAGACACCAGAAGGGTGGACGACAGAGGGGCGATACAGATC
rJMSF005K17+          AGGTTTCGGCTACGCTTTCCAGACACCAGAAGGGTGGACGACAGAGGGGCGATACAGATC
                      ____________________________________________________________
consensus             AGGTTTCGGCTACGCTTTCCAGACACCAGAAGGGTGGACGACAGAGGGGCGATACAGATC
 
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rJMSF005K19+          TCTAGCGTACATGCGGCCGTTGNCAATCTGGGCAATGCAATGGGCGTTANCGCAGCCAAA
rJMSF005K17+          TCTAGCGTACATGCGGCCGTTGGCAATCTGGGCAATGCAATGGGCGTTAACGCAGCCAAA
                      ____________________________________________________________
consensus             TCTAGCGTACATGCGGCCGTTGGCAATCTGGGCAATGCAATGGGCGTTAACGCAGCCAAA
 
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rJMSF005K19+          GCCAGCTTCGAAGCAAGAAGTGAAGCCAGNAATCACAGAAGCTTGTGTGCATAAGCAACA
rJMSF005K17+          GCCAGCTTCGAAGCAAGAAGTGAAGCCAGAAATCACAGAAGCTTGTGTGCATAAGCAACA
                      ____________________________________________________________
consensus             GCCAGCTTCGAAGCAAGAAGTGAAGCCAGAAATCACAGAAGCTTGTGTGCATAAGCAACA
 
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rJMSF005K19+          TTCTGGGTTTCTAAGAGNTGCTCGGCTTCTCAAGCTGCCAGACGAGAGAGATACTAGAGA
rJMSF005K17+          TTCTGGGTTTCTAAGAGTTGCTCGGCTTCTCAAGCTGCCAGACGAGAGAGATACTAGAGA
                      ____________________________________________________________
consensus             TTCTGGGTTTCTAAGAGTTGCTCGGCTTCTCAAGCTGCCAGACGAGAGAGATACTAGAGA
 
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rJMSF005K19+          CGTGTTTCAGGTCCTCNTCGATTACNCTTGTAAAAGAATGGTAACATGAAAATGACAGAT
rJMSF005K17+          CGTGTTTCAGGTCCTCTTCGATTACACTTGTAAAAGAATGGTAACATGAAAATGACAGAT
                      ____________________________________________________________
consensus             CGTGTTTCAGGTCCTCTTCGATTACACTTGTAAAAGAATGGTAACATGAAAATGACAGAT
 
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rJMSF005K19+          GGATCTCAACTACGTTAACTCCCCAATTGTATCTGGCCA                     
rJMSF005K17+          GGATCTCAACTA-GTTAACTCCCCAATTGTATATGGCCACTATTTCGCCATGAATGAAGT
                      ____________________________________________________________
consensus             GGATCTCAACTACGTTAACTCCCCAATTGTATCTGGCCACTATTTCGCCATGAATGAAGT