Contig 007021:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003K05Sequence430003550 (8)720007021 (3)emb|CDO97975.1|3e-89unnamed protein product [Coffea canephora]
JMSF006K06Sequence382003550 (8)518007021 (3)emb|CDO97975.1|7e-48unnamed protein product [Coffea canephora]
JMSF048J24Sequence654003550 (8)730007021 (3)emb|CDO97975.1|2e-91unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF006K06+                            TNTNTCGTATGCATGGGGTTCGCGAGTATCACTGGGATGTAC
rJMSF048J24+                                                                  GTAC
rJMSF003K05+                                                                  GTAC
                      ____________________________________________________________
consensus                               TNTNTCGTATGCATGGGGTTCGCGAGTATCACTGGGATGTAC
 
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rJMSF006K06+          GTGGTGATGACACAGATGATCTAACCACATTCCTTGTGGCCAGTGGCAAATCAGATGCAC
rJMSF048J24+          GTGGTGATGACACAGATGATCTAACCACATTCCTTGTGGCCAGTGGCAAATCAGATGCAC
rJMSF003K05+          GTGGTGATGACACAGATGATCTAACCACATTCCTTGTGGCCAGTGGCAAATCAGATGCAC
                      ____________________________________________________________
consensus             GTGGTGATGACACAGATGATCTAACCACATTCCTTGTGGCCAGTGGCAAATCAGATGCAC
 
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rJMSF006K06+          GCTACATGCCTGTTCCAACAAAACTCTCATTGAGAAAAAAGAGGGCCAGAGAAGGAAAAT
rJMSF048J24+          GCTACATGCCTGTTCCAACAAAACTCTCATTGAGAAAAAAGAGGGCCAGAGAAGGAAAAT
rJMSF003K05+          GCTACATGCCTGTTCCAACAAAACTCTCATTGAGAAAAAAGAGGGCCAGAGAAGGAAAAT
                      ____________________________________________________________
consensus             GCTACATGCCTGTTCCAACAAAACTCTCATTGAGAAAAAAGAGGGCCAGAGAAGGAAAAT
 
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rJMSF006K06+          CAAACGAAGAAGTAGAACAGTTTCCCATACCTGCAAGAGTGACAGTAAGGAATAGACAAA
rJMSF048J24+          CAAACGAAGAAGTAGAACAGTTTCCCATACCTGCAAGAGTGACAGTAAGGAATAGACAAA
rJMSF003K05+          CAAACGAAGAAGTAGAACAGTTTCCCATACCTGCAAGAGTGACAGTAAGGAATAGACAAA
                      ____________________________________________________________
consensus             CAAACGAAGAAGTAGAACAGTTTCCCATACCTGCAAGAGTGACAGTAAGGAATAGACAAA
 
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rJMSF006K06+          CAGTAGATGTCATTGAATTGAAAGATGAAGGGGGTTATTCAAGTTTCAAGGGGAGTGGTT
rJMSF048J24+          CAGTAGATGTCATTGAATTGAAAGATGAAGGGGGTTATTCAAGTTTCAAGGGGAGTGGTT
rJMSF003K05+          CAGTAGATGTCATTGAATTGAAAGATGAAGGGGGTTATTCAAGTTTCAAGGGGAGTGGTT
                      ____________________________________________________________
consensus             CAGTAGATGTCATTGAATTGAAAGATGAAGGGGGTTATTCAAGTTTCAAGGGGAGTGGTT
 
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rJMSF006K06+          CAGATTCTAAGAGATCAAGAATGAGCTTAGAAGATGGTTTACATTCAGAGAAGGGTATGC
rJMSF048J24+          CAGATTCTAAGAGATCAAGAATGAGCTTAGAAGATGGTTTACATTCAGAGAAGGGTATGC
rJMSF003K05+          CAGATTCTAAGAGATCAAGAATGAGCTTAGAAGATGGTTTACATTCAGAGAAGGGTATGC
                      ____________________________________________________________
consensus             CAGATTCTAAGAGATCAAGAATGAGCTTAGAAGATGGTTTACATTCAGAGAAGGGTATGC
 
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rJMSF006K06+          ATGACACGGATGAAGACCAATCTAGCGGCGGTGAATACGAGTTATCTGATTGATTGCAAA
rJMSF048J24+          ATGACACGGATGAAGACCAATCTAGCGGCGGTGAATACGAGTTATCTGATTGATTGCAAA
rJMSF003K05+          ATGACACGGATGAAGACCAATCTAGCGGCGGTGAATACGAGTTATCTGATTGATTGCAAA
                      ____________________________________________________________
consensus             ATGACACGGATGAAGACCAATCTAGCGGCGGTGAATACGAGTTATCTGATTGATTGCAAA
 
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rJMSF006K06+          AAATTTTCAAGTACAATAGGGTAATAAGAAAGTTGAAAGTAGAGTAGATTCTCAAGTACA
rJMSF048J24+          AAATTTTCAAGTACAATAGGGTAATAAGAAAGTTGAAAGTAGAGTAGATTCTCAAGTACA
rJMSF003K05+          AAATTTTCAAGTACAATAGGGTAATAAGAAAGTTGAAAGTAGAGTAGATTCTCAAGTACA
                      ____________________________________________________________
consensus             AAATTTTCAAGTACAATAGGGTAATAAGAAAGTTGAAAGTAGAGTAGATTCTCAAGTACA
 
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rJMSF006K06+          AGAGATTACTGACAAGAGTTTTTCTTTGTAACTAGTAAAAATTTTGTTTT          
rJMSF048J24+          AGAGATTACTGACAAGAGTTTTTCTTTGTAACTAGTAAAAATTTTGTTTTTGAAAGTT  
rJMSF003K05+          AGAGATTACTGACAAGAGTTTTTCTTTGTAACTAGTAAAAATTTTGTTTTTGAAAGTTCA
                      ____________________________________________________________
consensus             AGAGATTACTGACAAGAGTTTTTCTTTGTAACTAGTAAAAATTTTGTTTTTGAAAGTTCA