Contig 007020:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF003H19-                                   GGACCGGTCGACCGCTATCATCATCCATTGATTCAT
JMSF026K16-                                              CCGCTATCATCATCCATTGATTCAT
                      ____________________________________________________________
consensus                                     GGACCGGTCGACCGCTATCATCATCCATTGATTCAT
 
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JMSF003H19-           TGGAGAC-AAGAGCGATGAATCTGCTGCTACCAGGCGGAGGCGGAGGACCCTCACTCTCC
JMSF026K16-           TGGAGACGAAGAGCGATGAATCTGCTGCTACCAGGCGGAGGCGGAGGACCCTCACTCTCC
                      ____________________________________________________________
consensus             TGGAGACGAAGAGCGATGAATCTGCTGCTACCAGGCGGAGGCGGAGGACCCTCACTCTCC
 
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JMSF003H19-           TCTTCGCACCTATGCTCCCTCAAATTCATTCACCCTCTCCCCCCTCTTTTCTCCTCCATT
JMSF026K16-           TCTTCGCACCTATGCTCCCTCAAATTCATTCACCCTCTCCCCCCTCTTTTCTCCTCCATT
                      ____________________________________________________________
consensus             TCTTCGCACCTATGCTCCCTCAAATTCATTCACCCTCTCCCCCCTCTTTTCTCCTCCATT
 
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JMSF003H19-           TCTCACGCGCCCAAGATTCGCTGCAAGCCCATCACTCTCGCCAGAGCCGACACCGGAGCT
JMSF026K16-           TCTCACGCGCCCAAGATTCGCTGCAAGCCCATCACTCTCGCCAGAGCCGACACCGGAGCT
rJMSF026K16+           CTCACGCGCCCAAGATTCGCTGCAAGCCCATCACTCTCGCCAGAGCCGACACCGGAGCT
                      ____________________________________________________________
consensus             TCTCACGCGCCCAAGATTCGCTGCAAGCCCATCACTCTCGCCAGAGCCGACACCGGAGCT
 
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JMSF003H19-           TCCCGCCCCACCGCGACCACCGCCGCACCCAGTTCAACTCCTCTGAACGCCAGAGCCGAT
JMSF026K16-           TCCCGCCCCACCGCGACCACCGCCGCACCCAGTTCAACTCCTCTGAACGCCAGAGCCGAT
rJMSF026K16+          TCCCGCCCCACCGCGACCACCGCCGCACCCAGTTCAACTCCTCTGAACGCCAGAGCCGAT
rJMSF003H19+                                                 CCTCTGAACGCCAGAGCCGAT
                      ____________________________________________________________
consensus             TCCCGCCCCACCGCGACCACCGCCGCACCCAGTTCAACTCCTCTGAACGCCAGAGCCGAT
 
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JMSF003H19-           GAGGACGCGATATCTTTGGTCACCCAAGACGAGGTTCCTCTTGAAGGTGTTATCCAGTTC
JMSF026K16-           GAGGACGCGATATCTTTGGTCACCCAAGACGAGGTTCCTCTTGAAGGTGTTATCCAGTTC
rJMSF026K16+          GAGGACGCGATATCTTTGGTCACCCAAGACGAGGTTCCTCTTGAAGGTGTTATCCAGTTC
rJMSF003H19+          GAGGACGCGATATCTTTGGTCACCCAAGACGAGGTTCCTCTTGAAGGTGTTATCCAGTTC
                      ____________________________________________________________
consensus             GAGGACGCGATATCTTTGGTCACCCAAGACGAGGTTCCTCTTGAAGGTGTTATCCAGTTC
 
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JMSF003H19-           GAGAAGCCCGATTCTTCTTCCAAGATTTCCAAATGGGGCAAAGTGGCATTGCTAGCTGGT
JMSF026K16-           GAGAAGCCCGATTCTTCTTCCAAGATTTCCAAATGGGGCAAAGTGGCATTGCTAGCTGGT
rJMSF026K16+          GAGAAGCCCGATTCTTCTTCCAAGATTTCCAAATGGGGCAAAGTGGCATTGCTAGCTGGT
rJMSF003H19+          GAGAAGCCCGATTCTTCTTCCAAGATTTCCAAATGGGGCAAAGTGGCATTGCTAGCTGGT
                      ____________________________________________________________
consensus             GAGAAGCCCGATTCTTCTTCCAAGATTTCCAAATGGGGCAAAGTGGCATTGCTAGCTGGT
 
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JMSF003H19-           GG                                                          
JMSF026K16-           GGGGATGTCGCCGCTTTGCTCTTGTTCTCCGCAGTTGGAAGATTCAGCCATGGTTTTCCT
rJMSF026K16+          GGGGATGTCGCCGCTTTGCTCTTGTTCTCCGCAGTTGGAAGATTCAGCCATGGTTTTCCT
rJMSF003H19+          GGGGATGTCGCCGCTTTGCTCTTGTTCTCCGCAGTTGGAAGATTCAGCCATGGTTTTCCT
                      ____________________________________________________________
consensus             GGGGATGTCGCCGCTTTGCTCTTGTTCTCCGCAGTTGGAAGATTCAGCCATGGTTTTCCT
 
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JMSF026K16-           GTTTTTGAGCCTGAGACTTTGCGAACAGCTGACCCCTTCATTGCTGGGTGGTTTTTGAGT
rJMSF026K16+          GTTTTTGAGCCTGAGACTTTGCGAACAGCTGACCCCTTCATTGCTGGGTGGTTTTTGAGT
rJMSF003H19+          GTTTTTGAGCCTGAGACTTTGCGAACAGCTGACCCCTTCATTGCTGGGTGGTTTTTGAGT
                      ____________________________________________________________
consensus             GTTTTTGAGCCTGAGACTTTGCGAACAGCTGACCCCTTCATTGCTGGGTGGTTTTTGAGT
 
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JMSF026K16-           GCATATTTTCTCGGGGGTTATGGAGAGGATGGTCGAGGTATGAATGGCCTGTTTAAAGCA
rJMSF026K16+          GCATATTTTCTCGGGGGTTATGGAGAGGATGGTCGAGGTATGAATGGCCTGTTTAAAGCA
rJMSF003H19+          GCATATTTTCTCGGGGGTTATGGAGAGGATGGTCGAGGTATGAATGGCCTGTTTAAAGCA
                      ____________________________________________________________
consensus             GCATATTTTCTCGGGGGTTATGGAGAGGATGGTCGAGGTATGAATGGCCTGTTTAAAGCA
 
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JMSF026K16-           TTTATTGCTGCAACAAAGTCTTGGGCTTTAGGTATCCCGTTGGGTTTAGCCATAAGGGCT
rJMSF026K16+          TTTATTGCTGCAACAAAGTCTTGGGCTTTAGGTATCCCGTTGGGTTTAGCCATAAGGGCT
rJMSF003H19+          TTTATTGCTGCA--AAAGTCTTGGGCTTTAGGTATCCCGTTGGGTTTAGCCATAAGGGCT
                      ____________________________________________________________
consensus             TTTATTGCTGCAACAAAGTCTTGGGCTTTAGGTATCCCGTTGGGTTTAGCCATAAGGGCT
 
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JMSF026K16-           GCAACAGTGGGTCACGTACCGCCAGTCAACTTTGTAACAGTCACCATGGGGAGCACCGCT
rJMSF026K16+          GCAACAGTGGGTCACGTACCGCCAGTCAACTTTGTAACAGTCACCATGGGGAGCACCGCT
rJMSF003H19+          GCAACAGTGGGTCACGTACCGCCAGTCAACTTTGTAACAGTCACCATGGGGAGCACCGCT
                      ____________________________________________________________
consensus             GCAACAGTGGGTCACGTACCGCCAGTCAACTTTGTAACAGTCACCATGGGGAGCACCGCT
 
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JMSF026K16-           ATATTACTTATTG                                               
rJMSF026K16+          ATATTACTTATTGGATGGAGGACGTTGTTGTTTAGCGTTCTTCCTGATGATCGGAAGAAG
rJMSF003H19+          ATATTACTTATTGGATGGAGGACGTTGTTGTTTAGCGTTCTTCCTGATGATCGGAAGAAG
                      ____________________________________________________________
consensus             ATATTACTTATTGGATGGAGGACGTTGTTGTTTAGCGTTCTTCCTGATGATCGGAAGAAG
 
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rJMSF026K16+          AAGAATGATGTATATAAGCGCGGTAGTCCATTTGAGCTTTTCGAGTTGCTGACATCTTTG
rJMSF003H19+          AAGAATGATGTATATAAGCGCGGTAGTCCATTTGAGCTTTTCGAGTTGCTGACATCTTTG
                      ____________________________________________________________
consensus             AAGAATGATGTATATAAGCGCGGTAGTCCATTTGAGCTTTTCGAGTTGCTGACATCTTTG
 
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rJMSF026K16+          GTTAGAAGATGGTGAATGATGGGTAGCAACAACATTGAGCTTCCTTGTCTGTAGTAATTC
rJMSF003H19+          GTTAGAAGATGGTGAATGATGGGTAGCAACAACATTGAGCTTTCTTGTCTGTAGTAATTC
                      ____________________________________________________________
consensus             GTTAGAAGATGGTGAATGATGGGTAGCAACAACATTGAGCTTTCTTGTCTGTAGTAATTC
 
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rJMSF026K16+          TCTGAGAAGGCAATTTTC                                          
rJMSF003H19+          TCTGAGAAGGCAATTTTCAAGTTGTACATGTTTTCTGTGATCAAGAACCAAAGTGCAATA
                      ____________________________________________________________
consensus             TCTGAGAAGGCAATTTTCAAGTTGTACATGTTTTCTGTGATCAAGAACCAAAGTGCAATA