Contig 007019:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF003F03Sequence364000562 (2)ref|XP_009600337.1|55.8PREDICTED: uncharacterized protein LOC104095826 [Nicotiana tomentosiformis]698007019 (2)emb|CDP05665.1|2e-36unnamed protein product [Coffea canephora]
JMSF004D10Sequence203019898126007019 (2)

Alignment

This contig is upended


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rJMSF003F03+                                CCAGATATGCTTGCATATNTGAAAGAGCATCGCAAAAT
                      ____________________________________________________________
consensus                                   CCAGATATGCTTGCATATNTGAAAGAGCATCGCAAAAT
 
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rJMSF003F03+          AATTACAAGAGCGGAGCTAGACGCTATTCTGGCAAAAGAGAAACCAGAAGAAATAGAGTN
                      ____________________________________________________________
consensus             AATTACAAGAGCGGAGCTAGACGCTATTCTGGCAAAAGAGAAACCAGAAGAAATAGAGTN
 
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rJMSF003F03+          CACAGATATGGATGAAGCCATGGCACAAGCTGTTGACATCGGTGAAAATGATGATGAAGA
                      ____________________________________________________________
consensus             CACAGATATGGATGAAGCCATGGCACAAGCTGTTGACATCGGTGAAAATGATGATGAAGA
 
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rJMSF003F03+          AGAGGGTGAAGTTGAAGAGGAGAAAATTTCTCGCAATTGGAGTGTTCTGAAAAGTAATCC
                      ____________________________________________________________
consensus             AGAGGGTGAAGTTGAAGAGGAGAAAATTTCTCGCAATTGGAGTGTTCTGAAAAGTAATCC
 
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rJMSF003F03+          TGAGCTTCGCAAGACAAAGCCTAAACCGAAAAAGGAAAACATGTCTTTGGAAGAAGCTGT
                      ____________________________________________________________
consensus             TGAGCTTCGCAAGACAAAGCCTAAACCGAAAAAGGAAAACATGTCTTTGGAAGAAGCTGT
 
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rJMSF004D10+                          TTAACAGACTTCTTCATGGACTTTGAAGGCGATGAGTAGTAACT
rJMSF003F03+          AGATGATTCTGAAAACTTAACAGACTTCCTCATGGACTTTGAAGGCGATGAGTAGTAACT
                      ____________________________________________________________
consensus             AGATGATTCTGAAAACTTAACAGACTTCTTCATGGACTTTGAAGGCGATGAGTAGTAACT
 
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rJMSF004D10+          CTATGCACCTCATGGTCGAATGATTCCCTATCTCGTTGCAGGATAAATAGAGATTCATCN
rJMSF003F03+          CTATGCACCTCATGGTCGAATGATTCCCTATCTCGTTGCAGGATAAATAGAGATTCATCT
                      ____________________________________________________________
consensus             CTATGCACCTCATGGTCGAATGATTCCCTATCTCGTTGCAGGATAAATAGAGATTCATCT
 
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rJMSF004D10+          CGTTATATGATGAATATGTAGC                                      
rJMSF003F03+          CGTTATATGATGAATATGTAGCTTTAAGCGATGTTCTGCTGCACGTTTGCTGAGTTGCTG
                      ____________________________________________________________
consensus             CGTTATATGATGAATATGTAGCTTTAAGCGATGTTCTGCTGCACGTTTGCTGAGTTGCTG
 
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rJMSF003F03+          ATCATCTGGATAAGAACCTATATATGATATGATACGATGCCTTGTCACTGAAAAAAAAAT
                      ____________________________________________________________
consensus             ATCATCTGGATAAGAACCTATATATGATATGATACGATGCCTTGTCACTGAAAAAAAAAT
 
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rJMSF003F03+          GTTATAAAATTTTGGTTCTTGAGACTAAGTAGCAAGGTTTCATGCTTTTATCAGAAATGG
                      ____________________________________________________________
consensus             GTTATAAAATTTTGGTTCTTGAGACTAAGTAGCAAGGTTTCATGCTTTTATCAGAAATGG
 
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rJMSF003F03+          ATTGTCTGATCTTTGGTCTTTCATGTAGCAAAAAGGGAGCTCCTCCATCATGTGAATTTA
                      ____________________________________________________________
consensus             ATTGTCTGATCTTTGGTCTTTCATGTAGCAAAAAGGGAGCTCCTCCATCATGTGAATTTA
 
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rJMSF003F03+          GTTCAGAGCCATAAACTTGAGGATTTAGTTTAAATGTAAATGGGTGTTTTACACCCCAAA
                      ____________________________________________________________
consensus             GTTCAGAGCCATAAACTTGAGGATTTAGTTTAAATGTAAATGGGTGTTTTACACCCCAAA