Contig 007016:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001H23Sequence149013254 (3)668007016 (3)gb|KDP25046.1|3e-59hypothetical protein JCGZ_22581 [Jatropha curcas]
JMSF002N23Sequence306013254 (3)597007016 (3)ref|XP_008782802.1|6e-19PREDICTED: pumilio homolog 5-like isoform X2 [Phoenix dactylifera]
JMSF009E14Sequence420013254 (3)733007016 (3)emb|CDO97724.1|1e-85unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMSF009E14+             AGTTGCTATGCTGTCTACCCATCCCTATGGTTGTCGTGTGATCCAGAGAGTTTTAGA
                      ____________________________________________________________
consensus                AGTTGCTATGCTGTCTACCCATCCCTATGGTTGTCGTGTGATCCAGAGAGTTTTAGA
 
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rJMSF009E14+          GCATTGTTCAAATGACTCGCAAAGTCAATGTATAGTGGATGAAATCTTGGAATCAGCGTA
                      ____________________________________________________________
consensus             GCATTGTTCAAATGACTCGCAAAGTCAATGTATAGTGGATGAAATCTTGGAATCAGCGTA
 
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rJMSF009E14+          TGTTCTTGCTCAGGATCAGTATGGAAACTATGTCACCCAGCATGTTTTGCTAAGGGCACG
rJMSF001H23+                        ATCAGTATGGAAACTATGTCACCCAGCATGTTTTGNTAAGGGCACG
                      ____________________________________________________________
consensus             TGTTCTTGCTCAGGATCAGTATGGAAACTATGTCACCCAGCATGTTTTGCTAAGGGCACG
 
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rJMSF009E14+          ACCACGTGAAAGGCTTCAGATTATTAACAAGCTGGCCGGGAAAGTTGTACAGTTGAGTCA
rJMSF001H23+          ACCACGTGAAAGGCTTCAGATTATTAACAAGCTGGCCGGGAAAGTTGTACAGTTGAGTCA
                      ____________________________________________________________
consensus             ACCACGTGAAAGGCTTCAGATTATTAACAAGCTGGCCGGGAAAGTTGTACAGTTGAGTCA
 
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rJMSF009E14+          GCATAAATATGCTTCCAACGTTGTTGAGAAGTGTTTGGAACATGGCGATTCTGCTGAACG
rJMSF001H23+          GCATAAATATGCTTCCAACGTTGTTGAGAAGTGTTTGGAACATGGCGATTCTGCTGAACG
                      ____________________________________________________________
consensus             GCATAAATATGCTTCCAACGTTGTTGAGAAGTGTTTGGAACATGGCGATTCTGCTGAACG
 
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rJMSF009E14+          CGAGCTCTTGATTGAGGAGATTCTTGCTCAATCTGAGGGAAACGACAGTTTGCTGACTAT
rJMSF001H23+          CGAGCTCTTGATTGAGGAGATTCTTGCTCAATCTGAGGGAAACGACAGTTTGCTGACTAT
rJMSF002N23+             GCTCTTGATTGAGGAGNTTCNTGCTCAATTTGAGGGAAANGACAGTTTGCTGACTAT
                      ____________________________________________________________
consensus             CGAGCTCTTGATTGAGGAGATTCTTGCTCAATCTGAGGGAAACGACAGTTTGCTGACTAT
 
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rJMSF009E14+          GATGAAGGATCAGTTTGCAAACTACGTGGTTCAGAAGATTCTCGAAATCAGCAACGATAA
rJMSF001H23+          GATGAAGGATCAGTTTGCAAACTACGTGGTTCAGAAGATTCTCGAAATCAGCAACGATAA
rJMSF002N23+          GATGNAGGATCAGTTTGCAAACTACGTGGTTCAGAAGATTCTCGAAATCAGCAACGATAA
                      ____________________________________________________________
consensus             GATGAAGGATCAGTTTGCAAACTACGTGGTTCAGAAGATTCTCGAAATCAGCAACGATAA
 
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rJMSF009E14+          ACAACGAGCAACGTTGCTGAATCGTATCAAGGTTCATCTTCAAGCTCTGAGGAAATACAC
rJMSF001H23+          ACAACGAGCAACGTTGCTGAATCGTATCAAGGTTCATCTTCAAGCTCTGAGGAAATACAC
rJMSF002N23+          ACNACGAGCAACGNTGCTGAATCGNATCAAGGTTCATNTTCAAGCTNTGAGGAAATACCC
                      ____________________________________________________________
consensus             ACAACGAGCAACGTTGCTGAATCGTATCAAGGTTCATCTTCAAGCTCTGAGGAAATACAC
 
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rJMSF009E14+          CTATGGTAAACACATAGTGGCGAGATTCGAACAGCTT--TGGGGAAGAAACAGAAGCTGA
rJMSF001H23+          CTATGGTAAACACATAGTGGCGAGATTCGAACAGCTTTCTGGGGAAGAAACAGAAGCTGA
rJMSF002N23+          CTATGGTAAACNCATAGTGGCGAGATTNGAACAGCTTTNTGGGGAAGAAACNGAAGCTGA
                      ____________________________________________________________
consensus             CTATGGTAAACACATAGTGGCGAGATTCGAACAGCTTTCTGGGGAAGAAACAGAAGCTGA
 
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rJMSF009E14+          ATGAGCCTTAGATTATGGGATTCTTGAAGCCTTTCAAGAAGCTATGTTGAAAGGAATGGC
rJMSF001H23+          ATGAGCCTTAGATTATGGGATTCTTGAAGCCTTTCAAGAAGCTATGTTGAAAGGAATGGC
rJMSF002N23+          ATGAGCCTTAGATTATGGGATTCTTGAAGCCTTTCAAGAAGCTATGTTGAAAGGAATGGC
                      ____________________________________________________________
consensus             ATGAGCCTTAGATTATGGGATTCTTGAAGCCTTTCAAGAAGCTATGTTGAAAGGAATGGC
 
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rJMSF009E14+          TTAATTGATCTGCAGAAGTAGTTTGGGTTCTCAATTACTAGTTTCCCAGTGTAGAACTTG
rJMSF001H23+          TTAATTGATCTGCAGAAGTAGTTTGGGTTCTCAATTACTAGTTTCCCAGTGTAGAACTTG
rJMSF002N23+          TTAATTGATNTGCNGAAGTAGTTTGGGTTCTCAATTACTAGTTTCCCNGNGTAGAACTTG
                      ____________________________________________________________
consensus             TTAATTGATCTGCAGAAGTAGTTTGGGTTCTCAATTACTAGTTTCCCAGTGTAGAACTTG
 
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rJMSF009E14+          TTATGTTTGTGCATACATACATACATAGAAATAATTAAGAGACTGTCATATAGGTAAAAC
rJMSF001H23+          TTATGTTTGTGCATACATACATACATAGAAATAATTAAGAGACTGTCATATAGGTAAAAC
rJMSF002N23+          TTATGTTTGTGCATACNTACNTACATAGAAATAATTAAGNGNCTGTCATATAGGTAAAAC
                      ____________________________________________________________
consensus             TTATGTTTGTGCATACATACATACATAGAAATAATTAAGAGACTGTCATATAGGTAAAAC
 
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rJMSF009E14+          GTTAACAGAACAATATGG                                          
rJMSF001H23+          GTTAACAGAACAATATGGTTGCATTAGTTGCATGTTTTATTTCCTCCCTACATTTTACAC
rJMSF002N23+          GTTAACNGAACNATATGGTTGCNTTAGTTGCNTGTTTTATTTCCNCCCTACNTTTTACNC
                      ____________________________________________________________
consensus             GTTAACAGAACAATATGGTTGCATTAGTTGCATGTTTTATTTCCTCCCTACATTTTACAC
 
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rJMSF001H23+          ATTTAAGTATAATTTTTGAGTA                                      
rJMSF002N23+          NTTTAAGTATAATTTTTGAGTAATTTTCTAAAGGAACNATAGCCNAGCNATATTACNTGC
                      ____________________________________________________________
consensus             ATTTAAGTATAATTTTTGAGTAATTTTCTAAAGGAACNATAGCCNAGCNATATTACNTGC
 
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rJMSF002N23+          CTTCTTCATTTTTGGTTTGTCCTAGANTGGNGNGGNGTTGTCANGTTTTANNTAAATATT
                      ____________________________________________________________
consensus             CTTCTTCATTTTTGGTTTGTCCTAGANTGGNGNGGNGTTGTCANGTTTTANNTAAATATT