Contig 007012:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002B06Sequence269003639 (8)728007012 (8)
JMSF016B14Sequence456003639 (8)781007012 (8)
JMSF018D11Sequence515003639 (8)761007012 (8)
JMSF023M15Sequence611003639 (8)783007012 (8)
JMSF027N10Sequence621003639 (8)732007012 (8)
JMSF032G14Sequence635012073 (2)775007012 (8)
JMSF042J17Sequence801003639 (8)829007012 (8)
JMSF049B08Sequence640003639 (8)702007012 (8)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042J17+ ATGATGGNATTCTTTTGGAAAGGGGAATATATGGANTTCCANGTATTTG
                      ____________________________________________________________
consensus ATGATGGNATTCTTTTGGAAAGGGGAATATATGGANTTCCANGTATTTG
 
. : . : . : . : . : . :
rJMSF042J17+ ATGCTAGTACAGATTTAGTTGGAAAAACCCATAGTAATTTGTCAAATGTTTAAAGTAGGA
                      ____________________________________________________________
consensus ATGCTAGTACAGATTTAGTTGGAAAAACCCATAGTAATTTGTCAAATGTTTAAAGTAGGA
 
. : . : . : . : . : . :
rJMSF042J17+ AAAAATACTATAATACAAGGAGATAATTACTAGCCTAAACATGAAAATACCATGCAAAAT
                      ____________________________________________________________
consensus AAAAATACTATAATACAAGGAGATAATTACTAGCCTAAACATGAAAATACCATGCAAAAT
 
. : . : . : . : . : . :
rJMSF042J17+ TGAACAATTTCATGAATGGCTATGTGAAAAAAGAGCATATGGAATAAAAGCATTAAAATC
                      ____________________________________________________________
consensus TGAACAATTTCATGAATGGCTATGTGAAAAAAGAGCATATGGAATAAAAGCATTAAAATC
 
. : . : . : . : . : . :
rJMSF042J17+ TATAATTCAAAGTATGATAAAATCTAAAAAGCCAAATATTATAGCACAAGATAAAGGAGG
                      ____________________________________________________________
consensus TATAATTCAAAGTATGATAAAATCTAAAAAGCCAAATATTATAGCACAAGATAAAGGAGG
 
. : . : . : . : . : . :
rJMSF042J17+ AGAAACAGAAGAAATTATAACATTATATTATAATACAGAAATATCAACAAGTGATATTAC
                      ____________________________________________________________
consensus AGAAACAGAAGAAATTATAACATTATATTATAATACAGAAATATCAACAAGTGATATTAC
 
. : . : . : . : . : . :
rJMSF042J17+ AACTCTACAAGAAATGTATGAAAGAATAATAAATTTAAAACATACTCATGATAAAAAGAC
                      ____________________________________________________________
consensus AACTCTACAAGAAATGTATGAAAGAATAATAAATTTAAAACATACTCATGATAAAAAGAC
 
. : . : . : . : . : . :
rJMSF042J17+ TATAGAAGAATTGACAAAGGAAAGACCAATAATAAGTACAAAAGTTGAAATAAAATCAAA
rJMSF023M15+ AAGGAAAGNCCCATNATAAGTNCAAAAGGTGAAATTAAATCAAA
rJMSF032G14+ ATAAGTNCAAAAGTTGAAATAAAATCAAN
rJMSF016B14+ AAATCAAA
                      ____________________________________________________________
consensus TATAGAAGAATTGACAAAGGAAAGACCCATAATAAGTACAAAAGTTGAAATAAAATCAAA
 
. : . : . : . : . : . :
rJMSF042J17+ GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF023M15+ GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF032G14+ GAAANGAAAATTTTNATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF049B08+ CACCATGTGGACTCNTGAAATGTTATCATGG
rJMSF016B14+ GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF027N10+ AATGGTATCATGG
rJMSF018D11+ CCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF002B06+ TATCATGG
                      ____________________________________________________________
consensus GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
 
. : . : . : . : . : . :
rJMSF042J17+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF023M15+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF032G14+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF049B08+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF016B14+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF027N10+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF018D11+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF002B06+ CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
                      ____________________________________________________________
consensus CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
 
. : . : . : . : . : . :
rJMSF042J17+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF023M15+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF032G14+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF049B08+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF016B14+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF027N10+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF018D11+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF002B06+ CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
                      ____________________________________________________________
consensus CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
 
. : . : . : . : . : . :
rJMSF042J17+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF023M15+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF032G14+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF049B08+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF016B14+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF027N10+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF018D11+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF002B06+ ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
                      ____________________________________________________________
consensus ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
 
. : . : . : . : . : . :
rJMSF042J17+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF023M15+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF032G14+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF049B08+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF016B14+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF027N10+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF018D11+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF002B06+ CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
                      ____________________________________________________________
consensus CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
 
. : . : . : . : . : . :
rJMSF042J17+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF023M15+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF032G14+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF049B08+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF016B14+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF027N10+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF018D11+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF002B06+ GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
                      ____________________________________________________________
consensus GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
 
. : . : . : . : . : . :
rJMSF023M15+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF032G14+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF049B08+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF016B14+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF027N10+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF018D11+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF002B06+ AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
                      ____________________________________________________________
consensus AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
 
. : . : . : . : . : . :
rJMSF023M15+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF032G14+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF049B08+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF016B14+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF027N10+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF018D11+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF002B06+ ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
                      ____________________________________________________________
consensus ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
 
. : . : . : . : . : . :
rJMSF023M15+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF032G14+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF049B08+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF016B14+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF027N10+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF018D11+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF002B06+ CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
                      ____________________________________________________________
consensus CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
 
. : . : . : . : . : . :
rJMSF023M15+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF032G14+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF049B08+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF016B14+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF027N10+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF018D11+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF002B06+ GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
                      ____________________________________________________________
consensus GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
 
. : . : . : . : . : . :
rJMSF023M15+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF032G14+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF049B08+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF016B14+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF027N10+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF018D11+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF002B06+ GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
                      ____________________________________________________________
consensus GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
 
. : . : . : . : . : . :
rJMSF023M15+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTT
rJMSF032G14+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAA-TTTGGAAAGTT
rJMSF049B08+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF016B14+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF027N10+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF018D11+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF002B06+ AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
                      ____________________________________________________________
consensus AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
 
. : . : . : . : . : . :
rJMSF032G14+ GTATAAAAAATAAAT
rJMSF049B08+ GTATA
rJMSF016B14+ GTATAAAAAATAAATGTATGTAGTAAGG
rJMSF027N10+ GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAAT
rJMSF018D11+ GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAAT
rJMSF002B06+ GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAATT
                      ____________________________________________________________
consensus GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAATT