Contig 007012:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF042J17+                     ATGATGGNATTCTTTTGGAAAGGGGAATATATGGANTTCCANGTATTTG
                      ____________________________________________________________
consensus                        ATGATGGNATTCTTTTGGAAAGGGGAATATATGGANTTCCANGTATTTG
 
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rJMSF042J17+          ATGCTAGTACAGATTTAGTTGGAAAAACCCATAGTAATTTGTCAAATGTTTAAAGTAGGA
                      ____________________________________________________________
consensus             ATGCTAGTACAGATTTAGTTGGAAAAACCCATAGTAATTTGTCAAATGTTTAAAGTAGGA
 
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rJMSF042J17+          AAAAATACTATAATACAAGGAGATAATTACTAGCCTAAACATGAAAATACCATGCAAAAT
                      ____________________________________________________________
consensus             AAAAATACTATAATACAAGGAGATAATTACTAGCCTAAACATGAAAATACCATGCAAAAT
 
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rJMSF042J17+          TGAACAATTTCATGAATGGCTATGTGAAAAAAGAGCATATGGAATAAAAGCATTAAAATC
                      ____________________________________________________________
consensus             TGAACAATTTCATGAATGGCTATGTGAAAAAAGAGCATATGGAATAAAAGCATTAAAATC
 
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rJMSF042J17+          TATAATTCAAAGTATGATAAAATCTAAAAAGCCAAATATTATAGCACAAGATAAAGGAGG
                      ____________________________________________________________
consensus             TATAATTCAAAGTATGATAAAATCTAAAAAGCCAAATATTATAGCACAAGATAAAGGAGG
 
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rJMSF042J17+          AGAAACAGAAGAAATTATAACATTATATTATAATACAGAAATATCAACAAGTGATATTAC
                      ____________________________________________________________
consensus             AGAAACAGAAGAAATTATAACATTATATTATAATACAGAAATATCAACAAGTGATATTAC
 
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rJMSF042J17+          AACTCTACAAGAAATGTATGAAAGAATAATAAATTTAAAACATACTCATGATAAAAAGAC
                      ____________________________________________________________
consensus             AACTCTACAAGAAATGTATGAAAGAATAATAAATTTAAAACATACTCATGATAAAAAGAC
 
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rJMSF042J17+          TATAGAAGAATTGACAAAGGAAAGACCAATAATAAGTACAAAAGTTGAAATAAAATCAAA
rJMSF023M15+                          AAGGAAAGNCCCATNATAAGTNCAAAAGGTGAAATTAAATCAAA
rJMSF032G14+                                         ATAAGTNCAAAAGTTGAAATAAAATCAAN
rJMSF016B14+                                                              AAATCAAA
                      ____________________________________________________________
consensus             TATAGAAGAATTGACAAAGGAAAGACCCATAATAAGTACAAAAGTTGAAATAAAATCAAA
 
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rJMSF042J17+          GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF023M15+          GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF032G14+          GAAANGAAAATTTTNATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF049B08+                                       CACCATGTGGACTCNTGAAATGTTATCATGG
rJMSF016B14+          GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF027N10+                                                         AATGGTATCATGG
rJMSF018D11+                             CCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
rJMSF002B06+                                                              TATCATGG
                      ____________________________________________________________
consensus             GAAAAGAAAATATTAATCCCCTCTAAAAACACCATGTGAACTCTTGAAATGTTATCATGG
 
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rJMSF042J17+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF023M15+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF032G14+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF049B08+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF016B14+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF027N10+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF018D11+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
rJMSF002B06+          CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
                      ____________________________________________________________
consensus             CGAATGCCACACCACTGGATGGGAATTCAAAAACTGCTGATCAACAAGATCACACCAATG
 
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rJMSF042J17+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF023M15+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF032G14+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF049B08+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF016B14+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF027N10+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF018D11+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
rJMSF002B06+          CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
                      ____________________________________________________________
consensus             CATGGGAATGCATACCATTGGATGGAAATCTAAACCATTGATCGAATGATCATATCAATG
 
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rJMSF042J17+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF023M15+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF032G14+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF049B08+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF016B14+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF027N10+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF018D11+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
rJMSF002B06+          ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
                      ____________________________________________________________
consensus             ACAAATTGTCAAAACATTTCAAAGATATTATCAGGCCCAATGTAGTCTTACTACACTAAG
 
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rJMSF042J17+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF023M15+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF032G14+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF049B08+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF016B14+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF027N10+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF018D11+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
rJMSF002B06+          CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
                      ____________________________________________________________
consensus             CCCAATATTATTATCGGGCCCAACGTAGTCTTACTACACTAAGCCCAATATTATTACCAG
 
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rJMSF042J17+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF023M15+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF032G14+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF049B08+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF016B14+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF027N10+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF018D11+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
rJMSF002B06+          GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
                      ____________________________________________________________
consensus             GCCCAATGTAGTCTTACTACAGTAAGCCCATTATTATCAAGATATTATCAGGCCCAATGT
 
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rJMSF023M15+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF032G14+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF049B08+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF016B14+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF027N10+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF018D11+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
rJMSF002B06+          AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
                      ____________________________________________________________
consensus             AGTCTTACTACAGTAAGCCCATTATTATCAAGTTATTATCAGGCCCAATGTAGTCTTACT
 
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rJMSF023M15+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF032G14+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF049B08+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF016B14+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF027N10+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF018D11+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
rJMSF002B06+          ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
                      ____________________________________________________________
consensus             ACACTAAGCCCATTATTAGCTGATATTATCAGGCCCAATGTAGTCTTTTACTACAGTAAG
 
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rJMSF023M15+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF032G14+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF049B08+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF016B14+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF027N10+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF018D11+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
rJMSF002B06+          CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
                      ____________________________________________________________
consensus             CCCAATATTATTATCTTATAAACCATATGATGAAAGAATAAATTTGAAACTGATGGATGA
 
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rJMSF023M15+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF032G14+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF049B08+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF016B14+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF027N10+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF018D11+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
rJMSF002B06+          GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
                      ____________________________________________________________
consensus             GCTGGAAGAAAGTGAGAAGAATATGAATGTGAAGATAATCCTAGAACATGTTAGAAGTCA
 
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rJMSF023M15+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF032G14+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF049B08+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF016B14+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF027N10+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF018D11+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
rJMSF002B06+          GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
                      ____________________________________________________________
consensus             GCTGGAAGCAATATGATGGATGAAGAAAAAGGAAGCTTATCAACAAACACAACTGGAAAC
 
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rJMSF023M15+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTT         
rJMSF032G14+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAA-TTTGGAAAGTT
rJMSF049B08+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF016B14+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF027N10+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF018D11+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
rJMSF002B06+          AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
                      ____________________________________________________________
consensus             AGAAGATACAAAATATCAAAATAATGTGGCAGACAACTTATTGTGTAATTTTGGAAAGTT
 
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rJMSF032G14+          GTATAAAAAATAAAT                                             
rJMSF049B08+          GTATA                                                       
rJMSF016B14+          GTATAAAAAATAAATGTATGTAGTAAGG                                
rJMSF027N10+          GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAAT 
rJMSF018D11+          GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAAT 
rJMSF002B06+          GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAATT
                      ____________________________________________________________
consensus             GTATAAAAAATAAATGTATGTAGTAAGGTTATCTATATAAAAAGCCTCATTGTATCAATT