Contig 007008:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007L18Sequence477000537 (2)emb|CDP11215.1|5e-34unnamed protein product [Coffea canephora]801007008 (2)ref|XP_009628617.1|195PREDICTED: uncharacterized protein LOC104118931 [Nicotiana tomentosiformis]
JMSF001A08Sequence225000537 (2)729007008 (2)gb|KDP38012.1|1e-37hypothetical protein JCGZ_04655 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF007L18+              CTGAGAATAATCCCCAAATGACTCCTCAGCAGGAGAAAGAGCATTCAGACATGCCG
                      ____________________________________________________________
consensus                 CTGAGAATAATCCCCAAATGACTCCTCAGCAGGAGAAAGAGCATTCAGACATGCCG
 
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rJMFF007L18+          AGCATGCATCAGTCTTCAGATGAACAGATTGACGGGACTGAGTTTACACAAGCAACCATA
                      ____________________________________________________________
consensus             AGCATGCATCAGTCTTCAGATGAACAGATTGACGGGACTGAGTTTACACAAGCAACCATA
 
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rJMFF007L18+          CCGGATGAGGAAGCAGATAAATGTGCCGAGGGAGAAGGAAGACAGAATTTTGACACTGAT
                      ____________________________________________________________
consensus             CCGGATGAGGAAGCAGATAAATGTGCCGAGGGAGAAGGAAGACAGAATTTTGACACTGAT
 
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rJMFF007L18+          ATGGAAATGGAGTTACTTGATGAAAAAATAAGGATATGGTTAACTGGTAAGGAAGGTGAC
rJMSF001A08+                                                             GAAGGTGAC
                      ____________________________________________________________
consensus             ATGGAAATGGAGTTACTTGATGAAAAAATAAGGATATGGTTAACTGGTAAGGAAGGTGAC
 
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rJMFF007L18+          ATCCGGTTGCTCCTGTCAACGCTGCACCACATTCTATGGTTTAACAGCGGATGGCTCCCA
rJMSF001A08+          ATCCGGTTGCTCCTGTCAACGCTGCACCACATTCTATGGTTTAACAGCGGATGGCTCCCA
                      ____________________________________________________________
consensus             ATCCGGTTGCTCCTGTCAACGCTGCACCACATTCTATGGTTTAACAGCGGATGGCTCCCA
 
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rJMFF007L18+          GTCCCTTTAACTTACCTAATCGAAAGCTCGAGAGTGAAGAAGGCTTATCAGAAAGCTAGG
rJMSF001A08+          GTCCCTTTAACTTACCTAATCGAAAGCTCGAGAGTGAAGAAGGCTTATCAGAAAGCTAGG
                      ____________________________________________________________
consensus             GTCCCTTTAACTTACCTAATCGAAAGCTCGAGAGTGAAGAAGGCTTATCAGAAAGCTAGG
 
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rJMFF007L18+          CTTTGTCTGCACCCAGACAAACTGCAACAAAGAGGCGCAACTATCCCTCAAAAACACATT
rJMSF001A08+          CTTTGTCTGCACCCAGACAAACTGCAACAAAGAGGCGCAACTATCCCTCAAAAACACATT
                      ____________________________________________________________
consensus             CTTTGTCTGCACCCAGACAAACTGCAACAAAGAGGCGCAACTATCCCTCAAAAACACATT
 
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rJMFF007L18+          GCAGAGAAAGTGTTTTCTATCCTCCAGGATGCCTGGGCTGTGTTCCTTTCACAAGATATC
rJMSF001A08+          GCAGAGAAAGTGTTTTCTATCCTCCAGGATGCCTGGGCTGTGTTCCTTTCACAAGATATC
                      ____________________________________________________________
consensus             GCAGAGAAAGTGTTTTCTATCCTCCAGGATGCCTGGGCTGTGTTCCTTTCACAAGATATC
 
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rJMFF007L18+          CGCATTGGTTGACCACGGTTCAAACCAAACCAACGCGGTGTCGGTTAAAGGCAAGTGAGG
rJMSF001A08+          CGCATTGGTTGACCACGGTTCAAACCAAACCAACGCGGTGTCGGTTAAAGGCAAGTGAGG
                      ____________________________________________________________
consensus             CGCATTGGTTGACCACGGTTCAAACCAAACCAACGCGGTGTCGGTTAAAGGCAAGTGAGG
 
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rJMFF007L18+          TGAGGTGAGATGCATATGTGAATGATGACAAGGAGATGGGAATGGAACAAAATGGCAGCA
rJMSF001A08+          TGAGGTGAGATGCATATGTGAATGATGACAAGGAGATGGGAATGGAACAAAATGGCAGCA
                      ____________________________________________________________
consensus             TGAGGTGAGATGCATATGTGAATGATGACAAGGAGATGGGAATGGAACAAAATGGCAGCA
 
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rJMFF007L18+          AATTGCCAAACACTAGTGACCATGAACCGTACAATGTATGTGGAATCAGGGGTTTGGTTT
rJMSF001A08+          AATTGCCAAACACTAGTGACCATGAACCGTACAATGTATGTGGAATCAGGGGTTTGGTTT
                      ____________________________________________________________
consensus             AATTGCCAAACACTAGTGACCATGAACCGTACAATGTATGTGGAATCAGGGGTTTGGTTT
 
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rJMFF007L18+          CTTAAGCCTGTCTGCCAGTTGAAGAGAGAGCTGTTCTGTACAAAGCACTATGCACCACCT
rJMSF001A08+          CTTAAGCCTGTCTGCCAGTTGAAGAGAGAGCTGTTCTGTACAAAGCACTATGCACCACCT
                      ____________________________________________________________
consensus             CTTAAGCCTGTCTGCCAGTTGAAGAGAGAGCTGTTCTGTACAAAGCACTATGCACCACCT
 
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rJMFF007L18+          CATCATCATCATCATCATGTTACTCTCTTCTCTTTTGGATGGATGCTTGTGTTTGTATTT
rJMSF001A08+          CATCATCATCATCATCATGTTACTCTCTTCTCTTTTGGATGGATGCTTGTGTTTGTATTT
                      ____________________________________________________________
consensus             CATCATCATCATCATCATGTTACTCTCTTCTCTTTTGGATGGATGCTTGTGTTTGTATTT
 
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rJMFF007L18+          TACTTGTATTATACACTACTGCTT                                    
rJMSF001A08+          TACTTGTATTATACACTACTGCTTTAATAGATCACGTTTTATAGATTTTTGGGTGCTATT
                      ____________________________________________________________
consensus             TACTTGTATTATACACTACTGCTTTAATAGATCACGTTTTATAGATTTTTGGGTGCTATT
 
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rJMSF001A08+          CTCTATTATTTCTTCTGTGGTTGTATTGTATGCAGACCTCCCCCCAAGTAAAGATCATCT
                      ____________________________________________________________
consensus             CTCTATTATTTCTTCTGTGGTTGTATTGTATGCAGACCTCCCCCCAAGTAAAGATCATCT
 
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rJMSF001A08+          AATTTTGACTCTCATGTTTTGAACCATATTTTTTCTAAGGCTTTTGAGTTGTAATTCTTG
                      ____________________________________________________________
consensus             AATTTTGACTCTCATGTTTTGAACCATATTTTTTCTAAGGCTTTTGAGTTGTAATTCTTG