Contig 007007:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051H02Sequence618010642 (3)ref|XP_009787724.1|2e-78PREDICTED: STE20/SPS1-related proline-alanine-rich protein kinase isoform X2 [N421007007 (2)
JMSF016G20Sequence240010642 (3)166007007 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF051H02+ A
                      ____________________________________________________________
consensus A
 
. : . : . : . : . : . :
rJMFF051H02+ CCGAGGAGAAGTTGGAGACCGGAGAGAAGTGGATTCTTGATGCCATAGGATTCTCATTCA
                      ____________________________________________________________
consensus CCGAGGAGAAGTTGGAGACCGGAGAGAAGTGGATTCTTGATGCCATAGGATTCTCATTCA
 
. : . : . : . : . : . :
rJMFF051H02+ AGTGCAAAAACTATGTATATTCAGGAAGGAAAGGAGAGATTACCGTGCATGTTGCCGGCT
                      ____________________________________________________________
consensus AGTGCAAAAACTATGTATATTCAGGAAGGAAAGGAGAGATTACCGTGCATGTTGCCGGCT
 
. : . : . : . : . : . :
rJMFF051H02+ GATGCCCTTTGTTGTCATCTAATGTTTGTTTCAAAGGTTCCAGCCCTCTGTCAAACTGAC
                      ____________________________________________________________
consensus GATGCCCTTTGTTGTCATCTAATGTTTGTTTCAAAGGTTCCAGCCCTCTGTCAAACTGAC
 
. : . : . : . : . : . :
rJMFF051H02+ AAATAAGTGAACCATGCTGCTGCTTATAGAGATACAATTCCTTCATTTATTTTATCAGTA
                      ____________________________________________________________
consensus AAATAAGTGAACCATGCTGCTGCTTATAGAGATACAATTCCTTCATTTATTTTATCAGTA
 
. : . : . : . : . : . :
rJMSF016G20+ ATAGGGAAAA
rJMFF051H02+ CAAGAGGAATCAAGCTTCTTTGTGCAGATCCATGCCTGGTATCCTAATATATAGGGAAAA
                      ____________________________________________________________
consensus CAAGAGGAATCAAGCTTCTTTGTGCAGATCCATGCCTGGTATCCTAATATATAGGGAAAA
 
. : . : . : . : . : . :
rJMSF016G20+ GGNTAAGCGGGNTCTTTTCNTTTTTTTTTTTTTCTTTTATCATGTCCCGTTTGTATCCTC
rJMFF051H02+ GGATAAGCGGGTTCTTTTCTTTTTTTTTTTTTTCTTTTATCATGTCCCGTTTGTATCCTC
                      ____________________________________________________________
consensus GGATAAGCGGGTTCTTTTCTTTTTTTTTTTTTTCTTTTATCATGTCCCGTTTGTATCCTC
 
. : . : . : . : . : . :
rJMSF016G20+ T--ATCCTGTATATAAATATATCGATTAATTATCTCTGAATGCAACATGAAAT
rJMFF051H02+ TAGATCCTATATATAAATATATCGATTAATTATCTCTGAATGCAACATGAAATTGTAATT
                      ____________________________________________________________
consensus TAGATCCTGTATATAAATATATCGATTAATTATCTCTGAATGCAACATGAAATTGTAATT