Contig 007003:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010O05Sequence710007003 (9)gb|KDP40175.1|1e-49hypothetical protein JCGZ_02173 [Jatropha curcas]
JMFF017J04Sequence524000736 (9)ref|XP_006360794.1|1e-61PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum]774007003 (9)ref|XP_011071583.1|6e-81PREDICTED: FRIGIDA-like protein 4a [Sesamum indicum]
JMFF019G08Sequence530000736 (9)ref|XP_006360794.1|1e-65PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum]734007003 (9)ref|XP_006419936.1|8e-56hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176
JMFF022I09Sequence470000736 (9)ref|XP_006360794.1|3e-52PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum]761007003 (9)ref|XP_006419936.1|5e-60hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176
JMFF030L01Sequence420000736 (9)ref|XP_006360794.1|2e-42PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum]728007003 (9)ref|XP_006419936.1|2e-72hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176
JMFF051B04Sequence620000736 (9)ref|XP_009784382.1|2e-79PREDICTED: FRIGIDA-like protein 4a [Nicotiana sylvestris]506007003 (9)gb|KDP40175.1|5e-15hypothetical protein JCGZ_02173 [Jatropha curcas]
JMFN001B07Sequence556007003 (9)ref|XP_006419936.1|2e-77hypothetical protein CICLE_v100047531mg, partial [Citrus clementina] gb|ESR33176
JMSF006J21Sequence262019910ref|XP_004247354.1|2e-43PREDICTED: FRIGIDA-like protein 4a [Solanum lycopersicum]350007003 (9)
JMSF053G03Sequence674000736 (9)ref|XP_006360794.1|4e-87PREDICTED: FRIGIDA-like protein 4a-like [Solanum tuberosum]905007003 (9)ref|XP_011071583.1|8e-87PREDICTED: FRIGIDA-like protein 4a [Sesamum indicum]

Alignment

This contig is upended


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rJMFF017J04+                                                              TGGAGATA
rJMSF053G03+                      GGCGGAAACATATGCNTAAGCTTGCACTGTCTCTCGGCCTTGGAGATA
                      ____________________________________________________________
consensus                         GGCGGAAACATATGCNTAAGCTTGCACTGTCTCTCGGCCTTGGAGATA
 
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rJMFF030L01+                                     TTAGCAGAGGACAACAAGTAGATGCTGTACATT
JMFN001B07-                      CTGATTGAAGAGTTAATTAGCAGAGGACAACAAGTAGATGCTGTACATT
rJMFF017J04+          AAATGCCTGAGCTGATTGAAGAGTTAATTAGCAGAGGACAACAAGTAGATGCTGTACATT
rJMSF053G03+          AAATGCNTGAGCTGATTGAAGAGTTAATTAGCAGAGGACAACAAGTAGATGCTGTACATT
                      ____________________________________________________________
consensus             AAATGCCTGAGCTGATTGAAGAGTTAATTAGCAGAGGACAACAAGTAGATGCTGTACATT
 
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rJMFF030L01+          TCACTTATGAAGTCGNCCTCATTAACAAATTTCCTCCCGTTCCTCTTCTGAAAGCTTTTC
JMFN001B07-           TCACTTATGAAGTCGGCCTCATTAACAAATTTCCTCCCGTTCCTCTTCTGAAAGCTTTTC
rJMFF017J04+          TCACTTATGAAGTCGGCCTCATTAACAAATTTCCTCCCGTTCCTCTTCTGAAAGCTTTTC
rJMFF022I09+                        GGCCTCATTAACAAATTTCCTCCCGTTCNTCTTCTGAAAGCTTTTC
rJMFF019G08+                                                      CTTCTGAAAGCTTTTC
rJMSF053G03+          TCACTTATGAAGTCGGCCTCATTAACAAATTTCCTCCCGTTCCTCTTCTGAAAGCTTTTC
                      ____________________________________________________________
consensus             TCACTTATGAAGTCGGCCTCATTAACAAATTTCCTCCCGTTCCTCTTCTGAAAGCTTTTC
 
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rJMFF030L01+          TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
JMFN001B07-           TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
rJMFF017J04+          TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
rJMFF022I09+          TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
rJMFF019G08+          TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
rJMSF053G03+          TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
rJMFF010O05+                                                               GGCCGAG
                      ____________________________________________________________
consensus             TGAAGGATGCGAAGAAGGCTGCTACTGCAATTCTAGAGGATCCTAACAATTCTGGCCGAG
 
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rJMFF030L01+          CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
JMFN001B07-           CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
rJMFF017J04+          CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
rJMFF022I09+          CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
rJMFF019G08+          CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
rJMSF053G03+          CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
rJMFF010O05+          CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCNTAAAGTGCATTG
                      ____________________________________________________________
consensus             CTGCGCATCTTGCTGCGAAGAAGGAGCTCTCAGCAATCCGGGCTGTCCTAAAGTGCATTG
 
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rJMFF030L01+          AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
JMFN001B07-           AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
rJMFF017J04+          AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
rJMFF022I09+          AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
rJMFF019G08+          AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
rJMSF053G03+          AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
rJMFF010O05+          AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
                      ____________________________________________________________
consensus             AAGAATACAAGCTCGAAGCTGAATTCCCGCCAGAGCACCTCAAGAAGCGTCTCGACCAGT
 
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rJMFF030L01+          TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
JMFN001B07-           TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
rJMFF017J04+          TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
rJMFF022I09+          TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
rJMFF019G08+          TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
rJMSF053G03+          TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
rJMFF010O05+          TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
                      ____________________________________________________________
consensus             TGGAGAAGACCAAGAGCGAGAAAAAGAAGCCGGCTGCTGCTGCCGCCCCGGCTGCGAAGC
 
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rJMFF030L01+          GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
JMFN001B07-           GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
rJMFF017J04+          GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
rJMFF022I09+          GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
rJMFF019G08+          GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
rJMSF053G03+          GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
rJMFF010O05+          GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
rJMFF051B04+                                            CGCCAAGGCAGGCCGCTCAACCAACG
                      ____________________________________________________________
consensus             GTACACGTGTCAGTAACGGTGGTCCCATGCCTCCCGCCAAGGCAGGCCGCTCAACCAACG
 
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rJMFF030L01+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
JMFN001B07-           CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
rJMFF017J04+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
rJMFF022I09+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
rJMFF019G08+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
rJMSF053G03+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
rJMFF010O05+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
rJMFF051B04+          CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
                      ____________________________________________________________
consensus             CCTACGTCTCTTCTTTCCCAGCAGCCGCCCCTACGTTTGTGAGGTCGCCCTCGCACACCC
 
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rJMFF030L01+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
JMFN001B07-           AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMFF017J04+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMFF022I09+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMSF006J21+               CCTACTGGACTCCCAGCTNACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMFF019G08+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMSF053G03+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMFF010O05+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
rJMFF051B04+          AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
                      ____________________________________________________________
consensus             AGTACCCTACTGGACTCCCAGCTTACCCTGCATCGCCAATATACACCCATGGAAGCATGA
 
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rJMFF030L01+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
JMFN001B07-           GTCCCCAGTATGTTTACTCGCCCGAAG                                 
rJMFF017J04+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
rJMFF022I09+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
rJMSF006J21+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
rJMFF019G08+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
rJMSF053G03+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
rJMFF010O05+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
rJMFF051B04+          GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
                      ____________________________________________________________
consensus             GTCCCCAGTATGTTTACTCGCCCGAAGCCGCTCCTTACCCGGGCAGCCCCTACTCCCCAT
 
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rJMFF030L01+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
rJMFF017J04+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
rJMFF022I09+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
rJMSF006J21+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAAGT
rJMFF019G08+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
rJMSF053G03+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
rJMFF010O05+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
rJMFF051B04+          ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
                      ____________________________________________________________
consensus             ATGGAAGCTATGGCAATGCAATGGCACCGGCTTACCAGCAAGCTTACTACTGATATAACT
 
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rJMFF030L01+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMFF017J04+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMFF022I09+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMSF006J21+          AATGANTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMFF019G08+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMSF053G03+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMFF010O05+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
rJMFF051B04+          AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
                      ____________________________________________________________
consensus             AATGACTACTGGCTCAAGAAATATGGTGACAACTGATAATCATGACTCAATCTGAATTTC
 
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rJMFF030L01+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTA                         
rJMFF017J04+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGT              
rJMFF022I09+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
rJMSF006J21+          TNTAAAGTGATATGTAATCANTAATNTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
rJMFF019G08+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
rJMSF053G03+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
rJMFF010O05+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
rJMFF051B04+          TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
                      ____________________________________________________________
consensus             TCTAAAGTGATATGTAATCACTAATCTAAATGGTAGCTTTATCTGTGTGTTAATCCTTAA
 
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rJMFF022I09+          TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTCTGATGT     
rJMSF006J21+          TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTNTGATGT     
rJMFF019G08+          TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTCTGATGTTGA  
rJMSF053G03+          TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTCTGATGTTGATT
rJMFF010O05+          TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTCTGATGTTGATT
rJMFF051B04+          TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTCTGATGTTGATT
                      ____________________________________________________________
consensus             TTTCGACCTTTATCCTGCTTCTTGCTTTGCAGCAGCAGGGCTGTACTTCTGATGTTGATT
 
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rJMSF053G03+          AAACTTATAGTATTAGG                                           
rJMFF010O05+          AAACTTATAGTATTAGGTGTTTG                                     
rJMFF051B04+          AAACTTATAGTATTAGGTGTTTGGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGGCC
                      ____________________________________________________________
consensus             AAACTTATAGTATTAGGTGTTTGGAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGGCC