| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030E22 | Sequence | 590 | 009248 (3) | gb|AHA06001.1| | 8e-101 | jasmonate O-methyltransferase [Ipomoea nil] | 733 | 006998 (3) | gb|AHA06001.1| | 7e-125 | jasmonate O-methyltransferase [Ipomoea nil] |
| JMFF050D15 | Sequence | 585 | 009248 (3) | gb|AHA06001.1| | 7e-101 | jasmonate O-methyltransferase [Ipomoea nil] | 580 | 006998 (3) | gb|AHA06001.1| | 2e-78 | jasmonate O-methyltransferase [Ipomoea nil] |
| JMSF012L04 | Sequence | 468 | 009248 (3) | gb|AHA06001.1| | 2e-81 | jasmonate O-methyltransferase [Ipomoea nil] | 741 | 006998 (3) | gb|AHA06001.1| | 8e-126 | jasmonate O-methyltransferase [Ipomoea nil] |
This contig is upended
. : . : . : . : . : . :
rJMFF030E22+ CTCCGAGTGTGT
rJMSF012L04+ CCTCCGAGTGTGT
____________________________________________________________
consensus CCTCCGAGTGTGT
. : . : . : . : . : . :
rJMFF030E22+ TGACTGCGTATTCTCAGCAATTTCAGAAAGACTTTTCCTTGTTCTTGAAATCACGGTCGG
rJMSF012L04+ TGACTGCGTATTCTCAGCAATTTCAGAAAGACTTTTCCTTGTTCTTGAAATCACGGTCGG
____________________________________________________________
consensus TGACTGCGTATTCTCAGCAATTTCAGAAAGACTTTTCCTTGTTCTTGAAATCACGGTCGG
. : . : . : . : . : . :
rJMFF030E22+ CGGAGATGGTTCCCGGCGGCGGGATGGTTCTGTCGTTTATGGGGAGAAGCTCCGGCGATC
rJMSF012L04+ CGGAGATGGTTCCCGGCGGCGGGATGGTTCTGTCGTTTATGGGGAGAAGCTCCGGCGATC
____________________________________________________________
consensus CGGAGATGGTTCCCGGCGGCGGGATGGTTCTGTCGTTTATGGGGAGAAGCTCCGGCGATC
. : . : . : . : . : . :
rJMFF030E22+ CTACAACCGAAGATAGTTGCTATCAGTGGGAGCTCTTAGCAGAAGCACTATCTGCTCTCG
rJMSF012L04+ CTACAACCGAAGATAGTTGCTATCAGTGGGAGCTCTTAGCAGAAGCACTATCTGCTCTCG
____________________________________________________________
consensus CTACAACCGAAGATAGTTGCTATCAGTGGGAGCTCTTAGCAGAAGCACTATCTGCTCTCG
. : . : . : . : . : . :
rJMFF030E22+ TCTCTAAGGGTGTTGTTGAAGAGGAGAAGGTGGATTGCTTCAATGCCCCATACTATGCCC
rJMSF012L04+ TCTCTAAGGGTGTTGTTGAAGAGGAGAAGGTGGATTGCTTCAATGCCCCATACTATGCCC
rJMFF050D15+ GAGGAGAAGGTGGATTGCTTCAATGCCCCATACTATGCCC
____________________________________________________________
consensus TCTCTAAGGGTGTTGTTGAAGAGGAGAAGGTGGATTGCTTCAATGCCCCATACTATGCCC
. : . : . : . : . : . :
rJMFF030E22+ CATCGGTTGAAGAAGTGAAAGATGCGGTGGACGGAGAAGGCTCGTTTATCATCAATCGGC
rJMSF012L04+ CATCGGTTGAAGAAGTGAAAGATGCGGTGGACGGAGAAGGCTCGTTTATCATCAATCGGC
rJMFF050D15+ CATCGGTTGAAGAAGTGAAAGATGCGGTGGACGGAGAAGGCTCGTTTATCATCAATCGGC
____________________________________________________________
consensus CATCGGTTGAAGAAGTGAAAGATGCGGTGGACGGAGAAGGCTCGTTTATCATCAATCGGC
. : . : . : . : . : . :
rJMFF030E22+ TAGAGGCATTTGAGGTTGAATGGGACGGAGATTTGGAATTGGAGAGCAATAATTCTTCGT
rJMSF012L04+ TAGAGGCATTTGAGGTTGAATGGGACGGAGATTTGGAATTGGAGAGCAATAATTCTTCGT
rJMFF050D15+ TAGAGGCATTTGAGGTTGAATGGGACGGAGATTTGGAATTGGAGAGCAATAATTCTTCGT
____________________________________________________________
consensus TAGAGGCATTTGAGGTTGAATGGGACGGAGATTTGGAATTGGAGAGCAATAATTCTTCGT
. : . : . : . : . : . :
rJMFF030E22+ GTTGTGACACACTGAGGTTGATGTCAAGGGGGGAACGAGTGGCTAAAACCATAAGGGCTG
rJMSF012L04+ GTTGTGACACACTGAGGTTGATGTCAAGGGGGGAACGAGTGGCTAAAACCATAAGGGCTG
rJMFF050D15+ GTTGTGACACACTGAGGTTGATGTCAAGGGGGGAACGAGTGGCTAAAACCATAAGGGCTG
____________________________________________________________
consensus GTTGTGACACACTGAGGTTGATGTCAAGGGGGGAACGAGTGGCTAAAACCATAAGGGCTG
. : . : . : . : . : . :
rJMFF030E22+ TGGTTGAGTCGATGTTGACATGCCACTTTGGAAGAAATGTGATGGATGAATTATTCACCA
rJMSF012L04+ TGGTTGAGTCGATGTTGACATGCCACTTTGGAAGAAATGTGATGGATGAATTATTCACCA
rJMFF050D15+ TGGTTGAGTCGATGTTGACATGCCACTTTGGAAGAAATGTGATGGATGAATTATTCACCA
____________________________________________________________
consensus TGGTTGAGTCGATGTTGACATGCCACTTTGGAAGAAATGTGATGGATGAATTATTCACCA
. : . : . : . : . : . :
rJMFF030E22+ TATACACTGGGTTGGTTGATGACTACTTTTCCAGGACCAGACCCAAGTATATCAACTTGC
rJMSF012L04+ TATACACTGGGTTGGTTGATGACTACTTTTCCAGGACCAGACCCAAGTATATCAACTTGC
rJMFF050D15+ TATACACTGGGTTGGTTGATGACTACTTTTCCAGGACCAGACCCAAGTATATCAACTTGC
____________________________________________________________
consensus TATACACTGGGTTGGTTGATGACTACTTTTCCAGGACCAGACCCAAGTATATCAACTTGC
. : . : . : . : . : . :
rJMFF030E22+ TCATTTCTCTTTCAAGGAAATAATGACCATTTCACTATTTTTCCAATTCTCGTCGACTAT
rJMSF012L04+ TCATTTCTCTTTCAAGGAAATAATGACCATTTCACTATTTTTCCAATTCTCGTCGACTAT
rJMFF050D15+ TCATTTCTCTTTCAAGGAAATAATGACCATTTCACTATTTTTCCAATTCTCGTCGACTAT
____________________________________________________________
consensus TCATTTCTCTTTCAAGGAAATAATGACCATTTCACTATTTTTCCAATTCTCGTCGACTAT
. : . : . : . : . : . :
rJMFF030E22+ TATGAGCAATTTAGGTTTATATATCTCTTTGTAGTTTTTTGTCAGCTAGAGTCATAAAGC
rJMSF012L04+ TATGAGCAATTTAGGTTTATATATCTCTTTGTAGTTTTTTGTCAGCTAGAGTCATAAAGC
rJMFF050D15+ TATGAGCAATTTAGGTTTATATATCTCTTTGTAGTTTTTTGTCAGCTAGAGTCATAAAGC
____________________________________________________________
consensus TATGAGCAATTTAGGTTTATATATCTCTTTGTAGTTTTTTGTCAGCTAGAGTCATAAAGC
. : . : . : . : . : . :
rJMFF030E22+ AAAGGTTACCATGTACACATCTTCAAATACTAGCTAAGGGCATCCTCATAACTAAAAAAT
rJMSF012L04+ AAAGGTTACCATGTACACATCTTCAAATACTAGCTAAGGGCATCCTCATAACTAAAAAAT
rJMFF050D15+ AAAGGTTACCATGTACACATCTTCAAATACTAGCTAAGGGCATCCTCATAACTAAAAAAT
____________________________________________________________
consensus AAAGGTTACCATGTACACATCTTCAAATACTAGCTAAGGGCATCCTCATAACTAAAAAAT
. : . : . : . : . : . :
rJMFF030E22+ A
rJMSF012L04+ A
rJMFF050D15+ ATAGTATTTGCATTGTTTTAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACGCTCCAGGGT
____________________________________________________________
consensus ATAGTATTTGCATTGTTTTAAAAAAAAAAAAAGAAAAAAAAAAAAAAAACGCTCCAGGGT