Contig 006993:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005F24Sequence448010658 (16)ref|XP_011098505.1|3e-41PREDICTED: potassium transporter 8-like [Sesamum indicum] ref|XP_011098506.1| PR172006993 (6)
JMFF014P18Sequence520010658 (16)ref|XP_011098505.1|1e-57PREDICTED: potassium transporter 8-like [Sesamum indicum] ref|XP_011098506.1| PR171006993 (6)
JMFF029J21Sequence543010658 (16)ref|XP_011098505.1|4e-63PREDICTED: potassium transporter 8-like [Sesamum indicum] ref|XP_011098506.1| PR168006993 (6)
JMFF049F04Sequence624010658 (16)ref|XP_011098505.1|3e-78PREDICTED: potassium transporter 8-like [Sesamum indicum] ref|XP_011098506.1| PR580006993 (6)ref|XP_009599988.1|5e-45PREDICTED: potassium transporter 8-like [Nicotiana tomentosiformis]
JMFS099F09Sequence623006993 (6)ref|XP_009599988.1|2e-88PREDICTED: potassium transporter 8-like [Nicotiana tomentosiformis]
JMSF010P10Sequence255010658 (16)651006993 (6)gb|ABI14646.1|4e-59putative high-affinity potassium transporter protein 1 [Nicotiana tabacum]

Alignment

This contig is upended


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JMFS099F09-                                                                  AGAAT
                      ____________________________________________________________
consensus                                                                    AGAAT
 
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JMFS099F09-           CGGGCCGAAAGAGCACAGAGTGTACAGATGCATAGCCAGATATGGCTATCGCGATGTTCA
rJMSF010P10+                               GTACAGATGCATAGCCAGATATGGCTATCGCGATGTTCA
                      ____________________________________________________________
consensus             CGGGCCGAAAGAGCACAGAGTGTACAGATGCATAGCCAGATATGGCTATCGCGATGTTCA
 
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JMFS099F09-           CATGGACGACGTGGAGTTCGAGAAGGATCTGCTTTGCAGTATCGAAAAATTCATCCGTTC
rJMSF010P10+          CATGGACGACGTGGAGTTCGAGAAGGATTTGCTTTGCAGTATNGAAAAATTCNTCCGTTC
                      ____________________________________________________________
consensus             CATGGACGACGTGGAGTTCGAGAAGGATTTGCTTTGCAGTATCGAAAAATTCATCCGTTC
 
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JMFS099F09-           AGAAGCTCCGGAACAGGGTGACCTAATGGATTTTGACGACGACGAAAGGATGACCGTCAT
rJMSF010P10+          AGAAGCTCCGGAACAGGGTGACCTAATGGATTTTGACGNCGACGAAAGGATGACCGTCAT
                      ____________________________________________________________
consensus             AGAAGCTCCGGAACAGGGTGACCTAATGGATTTTGACGACGACGAAAGGATGACCGTCAT
 
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JMFS099F09-           CGGAACCACTTCCACATACCTAGAAGGCAAAACAATGAGCGAGGACGGCGAAAACATGTC
rJMSF010P10+          TGGAACCNCTTNCNCATNCCTNGAAGGCAAAACNATGAGCGNGGNCGGNGAAAACATGTN
                      ____________________________________________________________
consensus             TGGAACCACTTCCACATACCTAGAAGGCAAAACAATGAGCGAGGACGGCGAAAACATGTC
 
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JMFS099F09-           CGCAAGCACGACGACGGAGCTGCGAGAGATCTCCTCGCCGGAGATGATGACCGGACGGCG
rJMSF010P10+          CGCAAGCNCGACGACGGAGCTGCGAGAGATNTNCTNNCCGGAGATGATGACCGGACGGCG
rJMFF049F04+                                               CCGGAGATGATGACCGGACGGCG
                      ____________________________________________________________
consensus             CGCAAGCACGACGACGGAGCTGCGAGAGATCTCCTCGCCGGAGATGATGACCGGACGGCG
 
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JMFS099F09-           AGTGCGATTCCTATTGCCGGAGAGTCCACAGATGGATCCAAGCGTGCGAGCGGAACTGCG
rJMSF010P10+          AGTGCGATTCCTATTGCCGGNGAGTCCNCAGANGGATCCNAGCGTGCGAGCGGAACTGCG
rJMFF049F04+          AGTGCGATTCCTATTGCCGGAGAGTCCACAGATGGATCCAAGCGTGCGAGCGGAACTGCG
                      ____________________________________________________________
consensus             AGTGCGATTCCTATTGCCGGAGAGTCCACAGATGGATCCAAGCGTGCGAGCGGAACTGCG
 
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JMFS099F09-           CGATCTGATGGAAGCAAGGGAAGCAGGCATGGCGTTCATACTGGGACGCTGCTACGTGAA
rJMSF010P10+          CGATTTGATGGAAGCAAGGGAAGCNGGCNTGGCGTTCATACTGGGNCGNTGNTACGTGAA
rJMFF049F04+          CGATCTGATGGAAGCAAGGGAAGCAGGCATGGCGTTCATACTGGGACGCTGCTACGTGAA
                      ____________________________________________________________
consensus             CGATCTGATGGAAGCAAGGGAAGCAGGCATGGCGTTCATACTGGGACGCTGCTACGTGAA
 
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JMFS099F09-           GGCTAAAAGCGGTTCCAGTTTCATGAAGAAAGTAGTCATCGATTTAGGTTACGATTTCTT
rJMSF010P10+          GGNTAAAAGCGGTTCCNGTTTCNTGAAGAAAGTNGTCATCGATTTAGGTTNCGATTTNTT
rJMFF049F04+          GGCTAAAAGCGGTTCCAGTTTCATGAAGAAAGTAGTCATCGATTTAGGTTACGATTTCTT
                      ____________________________________________________________
consensus             GGCTAAAAGCGGTTCCAGTTTCATGAAGAAAGTAGTCATCGATTTAGGTTACGATTTCTT
 
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JMFS099F09-           GAGGAGGAATTCTCGAGGGCCAACATATGCGCTCAGCTTCCCTCGCGCATCAACTTTAGA
rJMSF010P10+          GAGGNGGAATTNTCGNGGGCCAACATATGCGNTNAGNTTCCCTCGNGCATCAACTTTAGA
rJMFF049F04+          GAGGAGGAATTCTCGAGGGCCAACATATGCGCTCAGCTTCCCTCGCGCATCAACTTTAGA
                      ____________________________________________________________
consensus             GAGGAGGAATTCTCGAGGGCCAACATATGCGCTCAGCTTCCCTCGCGCATCAACTTTAGA
 
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JMFS099F09-           AGTTGGCATGATCTACCTTGTATAACATACATAAACACAGTAAGTAGCATTCCCAGTTTC
rJMSF010P10+          AGTTGGCNTGATNTACCTTGTATAACNTACNTAAACCCCGTAAGTAGCNTTCCCNGTTTN
rJMFF049F04+          AGTTGGCATGATCTACCTTGTATAACATACATAAACACAGTAAGTAGCATTCCCAGTTTC
                      ____________________________________________________________
consensus             AGTTGGCATGATCTACCTTGTATAACATACATAAACACAGTAAGTAGCATTCCCAGTTTC
 
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JMFS099F09-           TTCCATTCCTACCTCCC                                           
rJMSF010P10+          TTCCNTTCCTACCTCCCNAACTTCTGTAAATGCTAGATTTTGTA                
rJMFF029J21+                                           TAGATTTTGTNCNGNAAATNGTCAAAA
rJMFF005F24+                                           TAGATTTTGTNCNGNAAATNGTCAAAA
rJMFF014P18+                                           TAGATTTTGTNCNGNAAATNGTCAAAA
rJMFF049F04+          TTCCATTCCTACCTCCCAAACTTCTGTAAATGCTAGATTTTGTACTGTAAATCGTCAAAA
                      ____________________________________________________________
consensus             TTCCATTCCTACCTCCCAAACTTCTGTAAATGCTAGATTTTGTACTGTAAATCGTCAAAA
 
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rJMFF029J21+          AAAAAAAAGTTCTGGGTAGCATTTCCACTACCTAGTCAGTAAATCTTGTTTGCCAGGTCT
rJMFF005F24+          AAAAAAAAGTTCTGGGTAGCATTTCCACTACCTAGTCAGTAAATCTTGTTTGCCAGGTCT
rJMFF014P18+          AAAAAAAAGTTCTGGGTAGCATTTCCACTACCTAGTCAGTAAATCTTGTTTGCCAGGTCT
rJMFF049F04+          AAAAAAAAGTTCTGGGTAGCATTTCCACTACCTAGTCAGTAAATCTTGTTTGCCAGGTCT
                      ____________________________________________________________
consensus             AAAAAAAAGTTCTGGGTAGCATTTCCACTACCTAGTCAGTAAATCTTGTTTGCCAGGTCT
 
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rJMFF029J21+          CTAGTCTTGATTCTGATGGCTTCTGCACCCAAACGAGATTAATCTAGCCTAGTGGAGTCA
rJMFF005F24+          CTAGTCTTGATTCTGATGGCTTCTGCACCCAAACGAGATTAATCTAGCCTAGTGGAGTCA
rJMFF014P18+          CTAGTCTTGATTCTGATGGCTTCTGCACCCAAACGAGATTAATCTAGCCTAGTGGAGTCA
rJMFF049F04+          CTAGTCTTGATTCTGATGGCTTCTGCACCCAAACGAGATTAATCTAGCCTAGTGGAGTCA
                      ____________________________________________________________
consensus             CTAGTCTTGATTCTGATGGCTTCTGCACCCAAACGAGATTAATCTAGCCTAGTGGAGTCA
 
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rJMFF029J21+          AT                                                          
rJMFF005F24+          AT                                                          
rJMFF014P18+          AT                                                          
rJMFF049F04+          ATTCAAGAGGCGTTGTTACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             ATTCAAGAGGCGTTGTTACAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG