Contig 006988:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048M02Sequence431023774ref|XP_011071827.1|7e-55PREDICTED: uncharacterized protein LOC105157190 isoform X2 [Sesamum indicum]255006988 (2)ref|XP_009760554.1|47.4PREDICTED: uncharacterized protein LOC104212885 [Nicotiana sylvestris]
JMFN016A01Sequence542006988 (2)ref|XP_011071826.1|2e-67PREDICTED: uncharacterized protein LOC105157190 isoform X1 [Sesamum indicum]

Alignment

This contig is upended


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JMFN016A01-                                                     GTAAACAGGAAAACGGGC
                      ____________________________________________________________
consensus                                                       GTAAACAGGAAAACGGGC
 
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JMFN016A01-           ATTCTTCCATGTATACTTGGATATTGAGCACAGGTTGGTGGAAAGGACGAGCTCCAATCA
                      ____________________________________________________________
consensus             ATTCTTCCATGTATACTTGGATATTGAGCACAGGTTGGTGGAAAGGACGAGCTCCAATCA
 
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JMFN016A01-           ACCCCGATGCTGTTGTAGTAATAAGCCTTTTGTGCACATTCCTGCTTGGTGGCTTTGTAT
                      ____________________________________________________________
consensus             ACCCCGATGCTGTTGTAGTAATAAGCCTTTTGTGCACATTCCTGCTTGGTGGCTTTGTAT
 
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JMFN016A01-           ACATTAACAGAGTGAAGCCTCTAAAAGCGCTGAAGAAACAATCATATCAATCGGCGAGAC
                      ____________________________________________________________
consensus             ACATTAACAGAGTGAAGCCTCTAAAAGCGCTGAAGAAACAATCATATCAATCGGCGAGAC
 
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JMFN016A01-           TGATCTTGGTAGTTGCAAGTTTGTATTGTTTATGGTGTGCGAGCCAAATATATTTGGTTA
                      ____________________________________________________________
consensus             TGATCTTGGTAGTTGCAAGTTTGTATTGTTTATGGTGTGCGAGCCAAATATATTTGGTTA
 
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JMFN016A01-           GCCCTCGCAGGCCAGCAGTCGGTGAAGAAGCTGATTTGGGTGTTCTCGTGTTTCTTGCTG
rJMFF048M02+                                                       TCGTGTTTCTTGCTG
                      ____________________________________________________________
consensus             GCCCTCGCAGGCCAGCAGTCGGTGAAGAAGCTGATTTGGGTGTTCTCGTGTTTCTTGCTG
 
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JMFN016A01-           TGTATTTTTTTCTTCCTCACTGGCTTTGTGTTCTCTCCATGAACTCGACCGATTCCCATG
rJMFF048M02+          TGTATTTTTTTCTTCCTCACTGGCTTTGTGTTCTCTCCATGAACTCGACCGATTCCCATG
                      ____________________________________________________________
consensus             TGTATTTTTTTCTTCCTCACTGGCTTTGTGTTCTCTCCATGAACTCGACCGATTCCCATG
 
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JMFN016A01-           GCACAGAAGTACTGCCACTTTAACAGTTATTCAAAATTAGTTTGTAAACCAATTACCTAT
rJMFF048M02+          GCACAGAAGTACTGCCACTTTAACAGTTATTCAAAATTAGTTTGTAAACCAATTACCTAT
                      ____________________________________________________________
consensus             GCACAGAAGTACTGCCACTTTAACAGTTATTCAAAATTAGTTTGTAAACCAATTACCTAT
 
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JMFN016A01-           ATTGGTTTCTAAGCTCATAATGTGTTGTCTTGTAGTCCTAATGATTTTGGATATTGGAGA
rJMFF048M02+          ATTGGTTTCTAAGCTCATAATGTGTTGTCTGGTAGTCCTAATGATTTTGGATATTGGAGA
                      ____________________________________________________________
consensus             ATTGGTTTCTAAGCTCATAATGTGTTGTCTTGTAGTCCTAATGATTTTGGATATTGGAGA
 
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JMFN016A01-           AACCATCATGGCTTTATGAGAAGTTCATTCACTCTCTTCAAACT                
rJMFF048M02+          AACCATCATGGCTTTATGAGAAGTTCATTCACTCTCTTCAAACTAAAAAAAAAAAAAAAG
                      ____________________________________________________________
consensus             AACCATCATGGCTTTATGAGAAGTTCATTCACTCTCTTCAAACTAAAAAAAAAAAAAAAG