Contig 006986:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035A13Sequence617008826 (3)ref|XP_009758520.1|2e-16PREDICTED: probable methyltransferase PMT23 [Nicotiana sylvestris]726006986 (3)ref|XP_009613322.1|5e-89PREDICTED: probable methyltransferase PMT23 [Nicotiana tomentosiformis]
JMFF048H02Sequence410008826 (3)ref|XP_009758520.1|5e-21PREDICTED: probable methyltransferase PMT23 [Nicotiana sylvestris]388006986 (3)gb|KJB67515.1|6e-21hypothetical protein B456_010G195400 [Gossypium raimondii]
JMSF050A10Sequence677008826 (3)ref|XP_009758520.1|3e-49PREDICTED: probable methyltransferase PMT23 [Nicotiana sylvestris]758006986 (3)ref|XP_009631455.1|2e-89PREDICTED: probable methyltransferase PMT23 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF050A10+                                                             ACGAGTGGC
                      ____________________________________________________________
consensus                                                                ACGAGTGGC
 
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rJMSF050A10+          CTGAACCCTGGCCCGAGAGGCTTAGCAGCAGACCTCCAAGCCTCTCGTTAGTAGGTAATG
rJMFF035A13+                                                        GTTAGTAGGTAATG
                      ____________________________________________________________
consensus             CTGAACCCTGGCCCGAGAGGCTTAGCAGCAGACCTCCAAGCCTCTCGTTAGTAGGTAATG
 
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rJMSF050A10+          GTGACGATGAAGAAGCTTTCAATCGGGATACCAAACACTGGGCTTCACTTCTCTCTGACG
rJMFF035A13+          GTGACGATGAAGAAGCTTTCAATCGGGATACCAAACACTGGGCTTCACTTCTCTCTGACG
                      ____________________________________________________________
consensus             GTGACGATGAAGAAGCTTTCAATCGGGATACCAAACACTGGGCTTCACTTCTCTCTGACG
 
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rJMSF050A10+          TTTACCTAGGAGGCCTTGAAATAAATTGGTCGGGCATTAGGAATGTGATGGATATGAATG
rJMFF035A13+          TTTACCTAGGAGGCCTTGAAATAAATTGGTCGGGCATTAGGAATGTGATGGATATGAATG
                      ____________________________________________________________
consensus             TTTACCTAGGAGGCCTTGAAATAAATTGGTCGGGCATTAGGAATGTGATGGATATGAATG
 
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rJMSF050A10+          CTGGCTATGGAGGGTTTGCTGCAGCATTAATCGACCAGCCTGTATGGGTAATGAACGTGA
rJMFF035A13+          CTGGCTATGGAGGGTTTGCTGCAGCATTAATCGACCAGCCTGTATGGGTAATGAACGTGA
                      ____________________________________________________________
consensus             CTGGCTATGGAGGGTTTGCTGCAGCATTAATCGACCAGCCTGTATGGGTAATGAACGTGA
 
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rJMSF050A10+          TTCCCATCAGCGAGCCAGATACTTTACCTGTTATATTCGATCGAGGATTGATTGGAGTAT
rJMFF035A13+          TTCCCATCAGCGAGCCAGATACTTTACCTGTTATATTCGATCGAGGATTGATTGGAGTAT
                      ____________________________________________________________
consensus             TTCCCATCAGCGAGCCAGATACTTTACCTGTTATATTCGATCGAGGATTGATTGGAGTAT
 
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rJMSF050A10+          ATCACGACTGGTGTGAGTCCTTCAATACCTATCCCCGCACATATGATCTTCTACAGGCCA
rJMFF035A13+          ATCACGACTGGTGTGAGTCCTTCAATACCTATCCCCGCACATATGATCTTNTACAGGCCA
                      ____________________________________________________________
consensus             ATCACGACTGGTGTGAGTCCTTCAATACCTATCCCCGCACATATGATCTTCTACAGGCCA
 
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rJMSF050A10+          GTTTACTCTTCGAAAAGTTAGCTCAAAGATGCGACATAATAGACATGGCGGTGGAGGTGG
rJMFF035A13+          GTTTACTCTTCGAAAAGTTAGCTCAAAGATGCGACATAATAGACATGGCGGTGGAGGTGG
rJMFF048H02+                                          GACATAATAGACATGGCGGTGGAGGTGG
                      ____________________________________________________________
consensus             GTTTACTCTTCGAAAAGTTAGCTCAAAGATGCGACATAATAGACATGGCGGTGGAGGTGG
 
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rJMSF050A10+          ACAGAATCTTGAGACCGGGTGGCGTTCTTTTAGTTCACGACACCATGGATATGCTTAACA
rJMFF035A13+          ACAGAATCTTGAGACCGGGTGGCGTTCTTTTAGTTCACGACACCATGGATATGCTTAACA
rJMFF048H02+          ACAGAATCTTGAGACCGGGTGGCGTTCTTTTAGTTCACGACACCAGGGATATGCTTAACA
                      ____________________________________________________________
consensus             ACAGAATCTTGAGACCGGGTGGCGTTCTTTTAGTTCACGACACCATGGATATGCTTAACA
 
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rJMSF050A10+          AGCTCACTCCAATTCTGCGCTCACTTCATTGGTCAGTAACCGTAAAGCAACAACAGTTTC
rJMFF035A13+          AGCTCACTCCAATTCTGCGCTCACTTCATTGGTCAGTAACCGTAAAGCAACAACAGTTTC
rJMFF048H02+          AGCTCACTCCAATTCTGCGCTCACTTCATTGGTCAGTAACCGTAAAGCAACAACAGTTTC
                      ____________________________________________________________
consensus             AGCTCACTCCAATTCTGCGCTCACTTCATTGGTCAGTAACCGTAAAGCAACAACAGTTTC
 
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rJMSF050A10+          TCGTTGGCAAGAAAGGCTTTTGGCGCCCGGATGAAAAGACCAAATTATGAACACACCCTC
rJMFF035A13+          TCGTTGGCAAGAAAGGCTTTTGGCGCCCGGATGAAAAGACCAAATTATGAACACACCCTC
rJMFF048H02+          TCGTTGGCAAGAAAGGCTTTTGGCGCCCGGATGAAAAGACCAAATTATGAACACACCCTC
                      ____________________________________________________________
consensus             TCGTTGGCAAGAAAGGCTTTTGGCGCCCGGATGAAAAGACCAAATTATGAACACACCCTC
 
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rJMSF050A10+          GTGGTGTATATATATATATATCTCCCTACTACATGCAGCAATATAGCTTTTGTTTCAACG
rJMFF035A13+          GTGGTGTATATATATATATATCTCCCTACTACATGCAGCAATATAGCTTTTGTTTCAACG
rJMFF048H02+          GTGGTGTATATATATATATATCTCCCTACTACATGCAGCAATATAGCTTTTGTTTCAACG
                      ____________________________________________________________
consensus             GTGGTGTATATATATATATATCTCCCTACTACATGCAGCAATATAGCTTTTGTTTCAACG
 
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rJMSF050A10+          AGATATCAAGATTTTTTTTTCCTCTAAATGTATTTCTAAGAGTTGAACTTTTTGCCCTAT
rJMFF035A13+          AGATATCAAGATTTTTTTTTCCTCTAAATGTATTTCTAAGAGTTGAACTTTTTGCCCTAT
rJMFF048H02+          AGATATCAAGATTTTTTTTTCCTCTAAATGTATTTCTAAGAGTTGAACTTTTTGCCCTAT
                      ____________________________________________________________
consensus             AGATATCAAGATTTTTTTTTCCTCTAAATGTATTTCTAAGAGTTGAACTTTTTGCCCTAT
 
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rJMSF050A10+          ATATGAACCCCAGGGGAACAAATTTCGGA                               
rJMFF035A13+          ATATGAACCCCAGGGGAACAAATTTCGGA-TGAGAAGCAAGAGAGGAACAAAT       
rJMFF048H02+          ATATGAACCCCAGGGGAACAAATTTCGGATTGAGAAGCAAGAGAGGAACAAATTAAATGT
                      ____________________________________________________________
consensus             ATATGAACCCCAGGGGAACAAATTTCGGATTGAGAAGCAAGAGAGGAACAAATTAAATGT