Contig 006983:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF047N15Sequence607005000 (6)ref|XP_010109636.1|2e-37hypothetical protein L484_015591 [Morus notabilis] gb|EXC23681.1| hypothetical p579006983 (2)ref|XP_009619160.1|6e-27PREDICTED: auxin transporter-like protein 4 [Nicotiana tomentosiformis]
JMSF014K06Sequence575005000 (6)ref|XP_010109636.1|1e-22hypothetical protein L484_015591 [Morus notabilis] gb|EXC23681.1| hypothetical p132006983 (2)

Alignment

This contig is upended


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rJMFF047N15+                              GCCCACATGCTCACCTATCGCAAAGCCTCTGCTCGACAGA
                      ____________________________________________________________
consensus                                 GCCCACATGCTCACCTATCGCAAAGCCTCTGCTCGACAGA
 
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rJMFF047N15+          ATGCTGCGGAGAAGCCACCATTCTTCATGCCCAGCTGGACCGCCATGTATGCCATCAACA
                      ____________________________________________________________
consensus             ATGCTGCGGAGAAGCCACCATTCTTCATGCCCAGCTGGACCGCCATGTATGCCATCAACA
 
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rJMFF047N15+          TCTTCATAGTGGGCTGGGTTTTGGTCGTCGGGTTCGGGTTCGGGGGATGGGCCAGCATCA
                      ____________________________________________________________
consensus             TCTTCATAGTGGGCTGGGTTTTGGTCGTCGGGTTCGGGTTCGGGGGATGGGCCAGCATCA
 
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rJMFF047N15+          CCAATTTCGTCAAACAAGTGGACACGTTCGGGCTTTTCGCCAAGTGCTACCAATGCAAGC
                      ____________________________________________________________
consensus             CCAATTTCGTCAAACAAGTGGACACGTTCGGGCTTTTCGCCAAGTGCTACCAATGCAAGC
 
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rJMFF047N15+          CGCCGCCCAAACCGGTGGCGCTTCCGCCCCACTCGGCGCCCAATGTCACCGCGCACCACT
                      ____________________________________________________________
consensus             CGCCGCCCAAACCGGTGGCGCTTCCGCCCCACTCGGCGCCCAATGTCACCGCGCACCACT
 
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rJMFF047N15+          GACTTACACCAATTCCGACGAACAACTCTCGTTAGCTGTTAGTATTTTGTATTATATACA
                      ____________________________________________________________
consensus             GACTTACACCAATTCCGACGAACAACTCTCGTTAGCTGTTAGTATTTTGTATTATATACA
 
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rJMSF014K06+                                                                  CCTT
rJMFF047N15+          TGGGGAAGTAGTAATACTTCTCCTATAATTGCCTATCATGTGTGCTGATCTTCATTCCTT
                      ____________________________________________________________
consensus             TGGGGAAGTAGTAATACTTCTCCTATAATTGCCTATCATGTGTGCTGATCTTCATTCCTT
 
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rJMSF014K06+          TTTTTTTTTTTGTGGTACTCCTAATATTTTGATTGTTGANTTTTGATTNTACAAGTTATT
rJMFF047N15+          TTTTTTTTTTTTTGGTACTCCTAATATTTTGATT-TTGATTTTTGATTTTACAAGTTATT
                      ____________________________________________________________
consensus             TTTTTTTTTTTTTGGTACTCCTAATATTTTGATTGTTGATTTTTGATTTTACAAGTTATT
 
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rJMSF014K06+          AGANAATTAAGAATTAAGATAGNGTGCTGATTTGTGACCATTCCGT              
rJMFF047N15+          AGATAATTAAGAATTAAGATAGTGTGCTGATTTGTGACCATTCCGTTGCTATCAAAGCAT
                      ____________________________________________________________
consensus             AGATAATTAAGAATTAAGATAGTGTGCTGATTTGTGACCATTCCGTTGCTATCAAAGCAT
 
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rJMFF047N15+          AGAGTAATGGAACCAATATATGTTAGTTTTGAACAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             AGAGTAATGGAACCAATATATGTTAGTTTTGAACAAAAAAAAAAAAAAACTCTCCAGGGT