Contig 006974:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF032M11+            CNGTAGTGGAATGCGGCTGGAAACAAATTGCAGAGCCCGTGATGCAGCTNTACNCTGA
                      ____________________________________________________________
consensus               CNGTAGTGGAATGCGGCTGGAAACAAATTGCAGAGCCCGTGATGCAGCTNTACNCTGA
 
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rJMSF032M11+          AACCCCCGATGGATCAGCCATTGAAGACAAGGAAACTTCAATGGTTTGGTGTTACGAGGA
                      ____________________________________________________________
consensus             AACCCCCGATGGATCAGCCATTGAAGACAAGGAAACTTCAATGGTTTGGTGTTACGAGGA
 
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rJMSF032M11+          TGCAGATCCCGATTTTGGATCTTGCCNAGCTAAAGAACTTNTCGATCNCCTCGAGAGTGT
                      ____________________________________________________________
consensus             TGCAGATCCCGATTTTGGATCTTGCCNAGCTAAAGAACTTNTCGATCNCCTCGAGAGTGT
 
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rJMSF032M11+          CCTTACTAATGAGCCCGTCNCGGTTAAGAGCGGTCAGAATNCCGTGGAAGTTAAGCCNCN
                      ____________________________________________________________
consensus             CCTTACTAATGAGCCCGTCNCGGTTAAGAGCGGTCAGAATNCCGTGGAAGTTAAGCCNCN
 
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rJMSF032M11+          GGGTGTGAGCAAAGGGCTTGTGGCGAAACGCCTACTTTCCCTGATGCAAGAGAGGGAGAT
JMFS067B06-                                   GAAACGCCTACTTTCCCTGATGCAAGAGAGGGAGAT
                      ____________________________________________________________
consensus             GGGTGTGAGCAAAGGGCTTGTGGCGAAACGCCTACTTTCCCTGATGCAAGAGAGGGAGAT
 
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rJMSF032M11+          GTCGCCGGATTTCGTTCTGTGCATAGGCGATGACCGATCGGACGAAGACATGTTCGAGGT
JMFS067B06-           GTCGCCGGATTTCGTTCTGTGCATAGGCGATGACCGATCGGACGAAGACATGTTCGAGGT
                      ____________________________________________________________
consensus             GTCGCCGGATTTCGTTCTGTGCATAGGCGATGACCGATCGGACGAAGACATGTTCGAGGT
 
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rJMSF032M11+          GATTATGAATTCGGTGGCTAGCCCGTCCATGGCCCCGAGTGCAGAAGTGTTTGCTTGCNC
JMFS067B06-           GATTATGAATTCGGTGGCTAGCCCGTCCATGGCCCCGAGTGCAGAAGTGTTTGCTTGCAC
rJMFF047A24+                               CCCGTCCATGGCCCCGAGTGCAGAAGTGTTTGCTTGCAC
                      ____________________________________________________________
consensus             GATTATGAATTCGGTGGCTAGCCCGTCCATGGCCCCGAGTGCAGAAGTGTTTGCTTGCAC
 
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rJMSF032M11+          GGTGGGTAAAAAGCCGAGCAAGGCGAAATACTACCTGGATGATACGGTNGAAATCGTGAG
JMFS067B06-           GGTGGGTAAAAAGCCGAGCAAGGCGAAATACTACCTGGATGATACGGTCGAAATCGTGAG
rJMFF047A24+          GGTGGGTAAAAAGCCGAGCAAGGCGAAATACTACCTGGATGATACGGTCGAAATCGTGAG
                      ____________________________________________________________
consensus             GGTGGGTAAAAAGCCGAGCAAGGCGAAATACTACCTGGATGATACGGTCGAAATCGTGAG
 
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rJMSF032M11+          GTTAATGCNGGGCTTGGCATGTGTTGCAGAACAACAACAAACGGCCCTTCTATAAATATA
JMFS067B06-           GTTAATGCAGGGCTTGGCATGTGTTGCAGAACAACAACAAACGGCCCTTCTATAAATATA
rJMFF047A24+          GTTAATGCAGGGCTTGGCATGTGTTGCAGAACAACAACAAACGGCCCTTCTATAAATATA
                      ____________________________________________________________
consensus             GTTAATGCAGGGCTTGGCATGTGTTGCAGAACAACAACAAACGGCCCTTCTATAAATATA
 
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rJMSF032M11+          TGAATGAATGAAGATATGGTTCCTTACNTGTAGGCNGAGAGAGCCCGGATGGTTTNTGGA
JMFS067B06-           TGAATGAATGAAGATATGGTTCCTTACATGTAGGCAGAGAGAGCCAGGATGGTTTCTGGA
rJMFF047A24+          TGAATGAATGAAGATATGGTTCCTTACATGTAGGCAGAGAGAGCCAGGATGGTTTCTGGA
                      ____________________________________________________________
consensus             TGAATGAATGAAGATATGGTTCCTTACATGTAGGCAGAGAGAGCCAGGATGGTTTCTGGA
 
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rJMSF032M11+          AGAGTTTGTAAATTACTCCGTACT--AAAAAAAAAAGTATTTAGATTGTGAGGAAACATT
JMFS067B06-           AGAGTTTGTAAATTACTCCGTACTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACATT
rJMFF047A24+          AGAGTTTGTAAATTACTCCGTACTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACATT
                      ____________________________________________________________
consensus             AGAGTTTGTAAATTACTCCGTACTAAAAAAAAAAAAGTATTTAGATTGTGAGGAAACATT
 
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rJMSF032M11+          GAATGTTACTTACATGTTATTGTTTTGGATT                             
JMFS067B06-           GAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACTTATAT
rJMFF047A24+          GAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACTTATAT
                      ____________________________________________________________
consensus             GAATGTTACTTACATGTTATTGTTTTGGATTTCTTCAGATGTTTGGTTAAAAACTTATAT
 
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JMFS067B06-           TTTATTTGGTTGCCGTTC                                          
rJMFF047A24+          TTTATTTGGTTGTCGTTCAAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TTTATTTGGTTGTCGTTCAAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG