| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046D13 | Sequence | 542 | 011631 (5) | ref|XP_006354009.1| | 2e-60 | PREDICTED: probable beta-D-xylosidase 7-like [Solanum tuberosum] | 449 | 006973 (5) | ref|XP_006354009.1| | 4e-50 | PREDICTED: probable beta-D-xylosidase 7-like [Solanum tuberosum] |
| JMFF046N16 | Sequence | 491 | 011631 (5) | ref|XP_006354009.1| | 5e-52 | PREDICTED: probable beta-D-xylosidase 7-like [Solanum tuberosum] | 495 | 006973 (5) | ref|XP_006354009.1| | 2e-47 | PREDICTED: probable beta-D-xylosidase 7-like [Solanum tuberosum] |
| JMFS044D11 | Sequence | 181 | 006973 (5) | ref|XP_009782574.1| | 3e-06 | PREDICTED: probable beta-D-xylosidase 7 [Nicotiana sylvestris] | |||||
| JMSF027O11 | Sequence | 663 | 011631 (5) | ref|XP_006354009.1| | 2e-60 | PREDICTED: probable beta-D-xylosidase 7-like [Solanum tuberosum] | 740 | 006973 (5) | ref|XP_009782574.1| | 2e-95 | PREDICTED: probable beta-D-xylosidase 7 [Nicotiana sylvestris] |
| JMSF041C08 | Sequence | 809 | 011631 (5) | ref|XP_002513892.1| | 2e-105 | Periplasmic beta-glucosidase precursor, putative [Ricinus communis] gb|EEF48475. | 667 | 006973 (5) | ref|XP_006354009.1| | 2e-104 | PREDICTED: probable beta-D-xylosidase 7-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF041C08+ CCCGAG
____________________________________________________________
consensus CCCGAG
. : . : . : . : . : . :
rJMSF041C08+ AATAGGGCAGCATCTTGTGGGCTGGCTATCCAGGCGAAGCAGGCGGCCTAGCACTTGCAC
rJMSF027O11+ AGCAGGTGGTCTAGCACTTGCAC
____________________________________________________________
consensus AATAGGGCAGCATCTTGTGGGCTGGCTATCCAGGCGAAGCAGGTGGTCTAGCACTTGCAC
. : . : . : . : . : . :
rJMSF041C08+ AAGTGATATTTGGTGACTACAATTCTGGAGGAAGATTGCCTGTCACCTGGTACCCTAAAG
rJMSF027O11+ AAGTGATATTTGGTGACTACAATCCTGGAGGAAGATTGCCTATCACCTGGTACCCTAAAG
____________________________________________________________
consensus AAGTGATATTTGGTGACTACAATTCTGGAGGAAGATTGCCTGTCACCTGGTACCCTAAAG
. : . : . : . : . : . :
rJMSF041C08+ ATTACATCAAAATCCCAATGACAGACATGAGGATGAGGGCTGATCACTTAACAGGCTACC
rJMSF027O11+ ATTACACCAAAATCCCAATGACAGACATGAGGATGAGGGCTGATCACTCCACAGGCTACC
____________________________________________________________
consensus ATTACATCAAAATCCCAATGACAGACATGAGGATGAGGGCTGATCACTTCACAGGCTACC
. : . : . : . : . : . :
rJMSF041C08+ CTGGGCGAACCTATAGATTCTACACTGGCCCTAAAGTTTTCGAGTTCGGGTATGGTCTTA
rJMSF027O11+ CTGGGCGAACCTATAGATTCTACACTGGCCCTAAAGTTTTCGAGTTCGGGTATGGTCTTA
____________________________________________________________
consensus CTGGGCGAACCTATAGATTCTACACTGGCCCTAAAGTTTTCGAGTTCGGGTATGGTCTTA
. : . : . : . : . : . :
rJMSF041C08+ GCTACACTACATACTCTTATGAGTTCACTTCTGTCACATCTACCACAATAAACTTGAACC
rJMFF046D13+ TTCACTTCTGTCACATCTACCACAATAAACTTGAACC
rJMSF027O11+ GCTACACTAAATACTCTTATGAGTTCACTTCTGTCACATCCACCACATTAAACTTGAACC
rJMFF046N16+ TAAACTTGAACC
____________________________________________________________
consensus GCTACACTACATACTCTTATGAGTTCACTTCTGTCACATCTACCACAATAAACTTGAACC
. : . : . : . : . : . :
rJMSF041C08+ AATTGGCAACAGTGAAGAGAGCTGAGGGATTGGATTCAGTCCATTACATATCAGTAGAAG
rJMFF046D13+ AATTGGCAACAGTGAAGAGAGCTGAGGGATTGGATTCAGTCCATTACATATCAGTAGAAG
rJMSF027O11+ AACTGGCAACTGTGAAGAGAGCTGAGGGATTGGATTCGGTCCATTACATATCAGTAGAGG
rJMFF046N16+ AATTGGCAACAGTGAAGAGAGCTGAGGGATTGGATTCAGTCCATTACATATCAGTAGAAG
____________________________________________________________
consensus AATTGGCAACAGTGAAGAGAGCTGAGGGATTGGATTCAGTCCATTACATATCAGTAGAAG
. : . : . : . : . : . :
rJMSF041C08+ AAATTGGGGAGGAAACCTGTGAGAAGACAAAGTTCTTAGCAATTGTTGGAGTTGAGAACT
rJMFF046D13+ AAATTGGGGAGGAAACCTGTGAGAAGACAAAGTTCTTAGCAATTGTTGGAGTTGAGAACT
rJMSF027O11+ AAATTGGAGAGGAAACCTGTGAGAATGCAAAGTTCTCAGCCATTGTTGGAGTTCAGAACT
rJMFF046N16+ AAATTGGGGAGGAAACCTGTGAGAAGACAAAGTTCTTAGCAATTGTTGGAGTTGAGAACT
____________________________________________________________
consensus AAATTGGGGAGGAAACCTGTGAGAAGACAAAGTTCTTAGCAATTGTTGGAGTTGAGAACT
. : . : . : . : . : . :
rJMSF041C08+ CTGAAGAAATGGATGGAACTCACCCTGTGCTGCTTTTCATCAAGCCTGCTAAAGGGAGAG
rJMFF046D13+ CTGAAGAAATGGATGGAACTCACCCTGTGCTGCTTTTCATCAAGCCTGCTAAAGGGAGAG
rJMSF027O11+ CTGAAGAAATGGATGGAACTCACCCCGTGCTGCTTTTCATCAGGCCTGCTAAAGGGAGAG
rJMFF046N16+ CTGAAGAAATGGATGGAACTCACCCTGTGCTGCTTTTCATCAAGCCTGCTAAAGGGAGAG
____________________________________________________________
consensus CTGAAGAAATGGATGGAACTCACCCTGTGCTGCTTTTCATCAAGCCTGCTAAAGGGAGAG
. : . : . : . : . : . :
rJMSF041C08+ AAGGAAACCCATTGAAACAGTTGATTGGGTTCCAGAGTTTGAACTTAAAGGCCGGCGGAA
rJMFF046D13+ AAGGAAACCCATTGAAACAGTTGATTGGGTTCCAGAGTTTGAACTTAAAGGCCGGCGGAA
rJMSF027O11+ AAGGGAACCCATTGAAACAGTTGATTGGGTTCCAGAGTGTGAACTTAAAGGCCAGCGAAA
rJMFF046N16+ AAGGAAACCCATTGAAACAGTTGATTGGGTTCCAGAGTTTGAACTTAAAGGCCGGCGGAA
____________________________________________________________
consensus AAGGAAACCCATTGAAACAGTTGATTGGGTTCCAGAGTTTGAACTTAAAGGCCGGCGGAA
. : . : . : . : . : . :
rJMSF041C08+ GAACTGAAGTTCAGTTTGAAATCAGCCCTTGTCACCATCTCAGTAGTGCCAACAAAGATG
rJMFF046D13+ GAACTGAAGTTCAGTTTGAAATCAGCCCTTGTCACCATCTCAGTAGTGCCAACAAAGATG
JMFS044D11+ GTCACCATCTCAGCAGCGCCAACAAAGATG
rJMSF027O11+ GAAGTGAAGTTCAGTTTGAAATTAGCCCTTGTCACCATCTCAGCAGCGCCAACAAAGATG
rJMFF046N16+ GAACTGAAGTTCAGTTTGAAATCAGCCCTTGTCACCATCTCAGTAGTGCCAACAAAGATG
____________________________________________________________
consensus GAACTGAAGTTCAGTTTGAAATCAGCCCTTGTCACCATCTCAGTAGTGCCAACAAAGATG
. : . : . : . : . : . :
rJMSF041C08+ GGTTAATGGTGATTGAGGAGGGGTCTAATTTGCTAGTTGTGGGGAACACGGAACA
rJMFF046D13+ GGTTAATGGTGATTGAGGAGGGGTCTAATTTGCTAGTTGTGGGGAACACGGAACACGCTG
JMFS044D11+ GGTTAATGGTTATTGAAGAGGGGTCTAGTTTGCTAGTTGTAGGGAACACTGAACATGCTA
rJMSF027O11+ GGTTAATGGTTATTGAAGAGGGGTCTAGTTTGCTAGTTGTAGGGAACACTGAACATGCTA
rJMFF046N16+ GGTTAATGGTGATTGAGGAGGGGTCTAATTTGCTAGTTGTGGGGAACACGGAACACGCTG
____________________________________________________________
consensus GGTTAATGGTGATTGAGGAGGGGTCTAATTTGCTAGTTGTGGGGAACACGGAACATGCTG
. : . : . : . : . : . :
rJMFF046D13+ TTGACATTGTAATTTGAATCCTTAAAT
JMFS044D11+ TTGACATTGTAATTTGAATCCTTAAAT
rJMSF027O11+ TTGACATTGTAATTTGAATCCTTAAAT
rJMFF046N16+ TTGACATTGTAATTTGAATCCTTAAATGTGCCCCTATTAGAGTTTAAATGTCAATAATAA
____________________________________________________________
consensus TTGACATTGTAATTTGAATCCTTAAATGTGCCCCTATTAGAGTTTAAATGTCAATAATAA
. : . : . : . : . : . :
rJMFF046N16+ TACCCAATATAAAAAAAATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus TACCCAATATAAAAAAAATAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG