| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF022K24 | Sequence | 514 | 008878 (4) | ref|XP_002262878.1| | 1e-32 | PREDICTED: protein S-acyltransferase 24 [Vitis vinifera] emb|CBI25565.3| unnamed | 689 | 006972 (4) | ref|XP_009762903.1| | 7e-49 | PREDICTED: protein S-acyltransferase 24 [Nicotiana sylvestris] |
| JMFF046K02 | Sequence | 567 | 008878 (4) | ref|XP_009621389.1| | 4e-43 | PREDICTED: protein S-acyltransferase 24 [Nicotiana tomentosiformis] | 579 | 006972 (4) | ref|XP_009762903.1| | 7e-28 | PREDICTED: protein S-acyltransferase 24 [Nicotiana sylvestris] |
| JMFF048L22 | Sequence | 390 | 008878 (4) | ref|XP_009621389.1| | 2e-13 | PREDICTED: protein S-acyltransferase 24 [Nicotiana tomentosiformis] | 357 | 006972 (4) | |||
| JMSF010M12 | Sequence | 243 | 008878 (4) | 700 | 006972 (4) | ref|XP_009762903.1| | 2e-55 | PREDICTED: protein S-acyltransferase 24 [Nicotiana sylvestris] | |||
This contig is upended
. : . : . : . : . : . :
rJMSF010M12+ TCTTCTTTTGGTGCATGGTTAAACCACGCTGGTACTCAGCATATTGGTGCTATA
rJMFF022K24+ GGTACTCAGCATATTGGTGCTATA
____________________________________________________________
consensus TCTTCTTTTGGTGCATGGTTAAACCACGCTGGTACTCAGCATATTGGTGCTATA
. : . : . : . : . : . :
rJMSF010M12+ ATTTTTTTACTTGCAGATTTTTTCCTATTTTCTGGTGTGACAGTCTTAACTGTGACTCAA
rJMFF022K24+ ATTTTTTTACTTGCAGATTTTTTCCTATTTTCTGGTGTGACAGTCTTAACTGTGACTCAA
____________________________________________________________
consensus ATTTTTTTACTTGCAGATTTTTTCCTATTTTCTGGTGTGACAGTCTTAACTGTGACTCAA
. : . : . : . : . : . :
rJMSF010M12+ GCTTCTCAGATTTCTCGCAATATTACAACAAATGAAATGGCAAATGCATTGCGCTACAAT
rJMFF022K24+ GCTTCTCAGATTTCTCGCAATATTACAACAAATGAAATGGCAAATGCATTGCGCTACAAT
____________________________________________________________
consensus GCTTCTCAGATTTCTCGCAATATTACAACAAATGAAATGGCAAATGCATTGCGCTACAAT
. : . : . : . : . : . :
rJMSF010M12+ TACCTCAGAGGGGCAGGTGGTCGCTTCAGAAATCCGTATGATCATGGGTGTAAGAAAAAC
rJMFF022K24+ TACCTCAGAGGGGCAGGTGGTCGCTTCAGAAATCCGTATGATCATGGGTGTAAGAAAAAC
rJMFF046K02+ CGCTTCAGAAATCCGTATGATCATGGGTGTAAGAAAAAC
____________________________________________________________
consensus TACCTCAGAGGGGCAGGTGGTCGCTTCAGAAATCCGTATGATCATGGGTGTAAGAAAAAC
. : . : . : . : . : . :
rJMSF010M12+ TGTTCAGATTTTCTGATAAATGGGTATAATGAGGATATTGAGTGTAGTGAAGAATCAGGT
rJMFF022K24+ TGTTCAGATTTTCTGATAAATGGGTATAATGAGGATATTGAGTGTAGTGAAGAATCAGGT
rJMFF046K02+ TGTTCAGATNTTCTGATAAATGGGTATAATGAGGATATTGAGTGTAGTGAAGAATCAGGT
____________________________________________________________
consensus TGTTCAGATTTTCTGATAAATGGGTATAATGAGGATATTGAGTGTAGTGAAGAATCAGGT
. : . : . : . : . : . :
rJMSF010M12+ GAAGTGGAAGGAATTGGGATGATACAAATGGCTAGTTCAGCCCTGCAAAACGGTGCCTGC
rJMFF022K24+ GAAGTGGAAGGAATTGGGATGATACAAATGGCTAGTTCAGCCCTGCAAAACGGTGCCTGC
rJMFF046K02+ GAAGTGGAAGGAATTGGGATGATACAAATGGCTAGTTCAGCCCTGCAAAACGGTGCCTGC
____________________________________________________________
consensus GAAGTGGAAGGAATTGGGATGATACAAATGGCTAGTTCAGCCCTGCAAAACGGTGCCTGC
. : . : . : . : . : . :
rJMSF010M12+ CATTCTCAACAGACCAATGGAAACGACCATGTAGTTATCAATGTGAATAAGAACACCACG
rJMFF022K24+ CATTCTCAACAGACCAATGGAAACGACCATGTAGTTATCAATGTGAATAAGAACACCACG
rJMFF048L22+ CAATGGGAATAAGAACACCACG
rJMFF046K02+ CATTCTCAACAGACCAATGGAAACGACCATGTAGTTATCAATGTGAATAAGAACACCACG
____________________________________________________________
consensus CATTCTCAACAGACCAATGGAAACGACCATGTAGTTATCAATGTGAATAAGAACACCACG
. : . : . : . : . : . :
rJMSF010M12+ AGTAGCCATCACAATCATGTTCACTCTTCTCACTGTAATCATCATAATAGTAGCAAAAAC
rJMFF022K24+ AGTAGCCATCACAATCATGTTCACTCTTCTCACTGTAATCATCATAATAGTAGCAAAAAC
rJMFF048L22+ AGTAGCCATCACAATCATGTTCACTCTTCTCGCGGTAATCATCATAATAGTAGCAAAAAC
rJMFF046K02+ AGTAGCCATCACAATCATGTTCACTCTTCTCACTGTAATCATCATAATAGTAGCAAAAAC
____________________________________________________________
consensus AGTAGCCATCACAATCATGTTCACTCTTCTCACTGTAATCATCATAATAGTAGCAAAAAC
. : . : . : . : . : . :
rJMSF010M12+ AAAACTGAACCTGTACCGTTGGGATTGGGTAGCGGCTTAGGGCGAAATGCTGGCCGTACT
rJMFF022K24+ AAAACTGAATCTGTACCGTTGGGATTGGGTAGCGGCTTAGGGCGAAATGCTGGCCGTACT
rJMFF048L22+ AAAACTGAATCTGTACCGTTGGGATTGGGTAGCGGCTTAGGGCGAAATGCTGGCCGTACT
rJMFF046K02+ AAAACTGAATCTGTACCGTTGGGATTGGGTAGCGGCTTAGGGCGAAATGCTGGCCGTACT
____________________________________________________________
consensus AAAACTGAATCTGTACCGTTGGGATTGGGTAGCGGCTTAGGGCGAAATGCTGGCCGTACT
. : . : . : . : . : . :
rJMSF010M12+ GCGGTTGTTTCATGATTGATGCTGCACCA-TTTTGGTTGAGAATGCCTCATTCATGGCTG
rJMFF022K24+ GCGGTTGTTTCATGATTGATGCTGCACCA-TTTTGGTTGAGAATGCCTCATTCATGGCTG
rJMFF048L22+ GCGGTTGTTTCATGATTGATGCTGCACCA-TTTTGGTTGAGAATGCCTCATTCATGGCTG
rJMFF046K02+ GCGGTTGTTTCATGATTGATGCTGCACCATTTTTGGTTGAGAATGCCTCATTCATGGCTG
____________________________________________________________
consensus GCGGTTGTTTCATGATTGATGCTGCACCA-TTTTGGTTGAGAATGCCTCATTCATGGCTG
. : . : . : . : . : . :
rJMSF010M12+ CTGTTGTATGTCAGTAGGTAGACATGTTTAGGTTTAGTAATTTACTATTTTTTTTGGTCA
rJMFF022K24+ CTGTTGTATGTCAGTAGGTAGACATGTTTAGGTTTAGTAATTTACTATTTTTTTTGGTCA
rJMFF048L22+ CTGTTGTATGTCAGTAGGTAGACATGTTTAGGTTTAGTAATTTACTATTTTTTTTGGTCA
rJMFF046K02+ CTGTTGTATGTCAGTAGGTAGACATGTTTAGGTTTAGTAATTTACTATTTTTTTTGGTCA
____________________________________________________________
consensus CTGTTGTATGTCAGTAGGTAGACATGTTTAGGTTTAGTAATTTACTATTTTTTTTGGTCA
. : . : . : . : . : . :
rJMSF010M12+ GCTCGTTTCCTATGTTCTCAGAGTCCGAGATTGTGAATGGCAAGAAC
rJMFF022K24+ GCTCGTTTCCTATGTTCTCAGAGTCCGAGATTGTGAATGGCAAGAACATGTTTACATT
rJMFF048L22+ GCTCGTTTCCTATGTTCTCAGAGTCCGAGATTGTGAATGGCAAGAACATGTTTGCATT
rJMFF046K02+ GCTCGTTTCCTATGTTCTCAGAGTCCGAGATTGTGAATGGCAAGAACATGTTTACATTAG
____________________________________________________________
consensus GCTCGTTTCCTATGTTCTCAGAGTCCGAGATTGTGAATGGCAAGAACATGTTTACATTAG
. : . : . : . : . : . :
rJMFF046K02+ AGCAAATGAGCTAAATATTTATGATTTGATGATAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AGCAAATGAGCTAAATATTTATGATTTGATGATAAAAAAAAAAAAAAAACTCTCCAGGGT