| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010K10 | Sequence | 549 | 000065 (7) | dbj|BAE94394.1| | 1e-84 | bHLH transcriptional factor [Ipomoea nil] | 729 | 006969 (7) | dbj|BAE94394.1| | 2e-143 | bHLH transcriptional factor [Ipomoea nil] |
| JMFF014I24 | Sequence | 544 | 000065 (7) | dbj|BAE94394.1| | 3e-83 | bHLH transcriptional factor [Ipomoea nil] | 758 | 006969 (7) | dbj|BAE94394.1| | 2e-123 | bHLH transcriptional factor [Ipomoea nil] |
| JMFF022P13 | Sequence | 495 | 000065 (7) | dbj|BAE94394.1| | 2e-85 | bHLH transcriptional factor [Ipomoea nil] | 666 | 006969 (7) | gb|ABW69686.1| | 6e-65 | anthocyanin synthesis regulatory protein [Ipomoea purpurea] |
| JMFF030J13 | Sequence | 405 | 000065 (7) | dbj|BAE94394.1| | 2e-48 | bHLH transcriptional factor [Ipomoea nil] | 671 | 006969 (7) | dbj|BAE94394.1| | 7e-125 | bHLH transcriptional factor [Ipomoea nil] |
| JMFF038G22 | Sequence | 543 | 000065 (7) | dbj|BAE94394.1| | 3e-83 | bHLH transcriptional factor [Ipomoea nil] | 233 | 006969 (7) | dbj|BAD18983.1| | 4e-06 | bHLH transcription activator Ivory seed [Ipomoea tricolor] dbj|BAD18984.1| bHLH |
| JMFF046F02 | Sequence | 545 | 000065 (7) | dbj|BAE94394.1| | 4e-77 | bHLH transcriptional factor [Ipomoea nil] | 455 | 006969 (7) | gb|ABW69686.1| | 6e-56 | anthocyanin synthesis regulatory protein [Ipomoea purpurea] |
| JMFF048F20 | Sequence | 361 | 000065 (7) | dbj|BAE94394.1| | 7e-40 | bHLH transcriptional factor [Ipomoea nil] | 303 | 006969 (7) | dbj|BAD18982.1| | 2e-28 | bHLH transcription activator Ivory seed [Ipomoea purpurea] dbj|BAF46858.1| bHLH |
This contig is upended
. : . : . : . : . : . :
rJMFF010K10+ TAAGCTCTGCAAGG
rJMFF014I24+ CTCTGCAAGG
____________________________________________________________
consensus TAAGCTCTGCAAGG
. : . : . : . : . : . :
rJMFF010K10+ CCGCACCCCAAGAAGAGCCCAACGTCAATCACGTCCTGGCGGAGCGCCGCCGCCGGGAG-
rJMFF014I24+ CCGCACCCCAAGAAGAGCCCAACGTCAATCACGTCCTGGCGGAGCGCCGCCGCCGGGAGA
____________________________________________________________
consensus CCGCACCCCAAGAAGAGCCCAACGTCAATCACGTCCTGGCGGAGCGCCGCCGCCGGGAGA
. : . : . : . : . : . :
rJMFF030J13+ AAGCTCAACGAGCGGTTCATTATCCTCAGGTCGCTCGTGCCTTTCGTGACGAAAATGGAC
rJMFF010K10+ AAGCTCAACGAGCGGTTCATTATCCTCAGGTCGCTCGTGCCTTTCGTGACGAAAATGGAC
rJMFF014I24+ AAGCTCAACGAGCGGTTCATTATCCTCAGGTCGCTCGTGCCTTTCGTGACGAAAATGGAC
____________________________________________________________
consensus AAGCTCAACGAGCGGTTCATTATCCTCAGGTCGCTCGTGCCTTTCGTGACGAAAATGGAC
. : . : . : . : . : . :
rJMFF030J13+ AAGGCCTCCATTCTCGGCGACACCATTGAGTACGTCAAGCAGTTGCGCCGGAGAATCCAG
rJMFF010K10+ AAGGCCTCCATTCTCGGCGACACCATTGAGTACGTCAAGCAGTTGCGCCGGAGAATCCAG
rJMFF014I24+ AAGGCCTCCATTCTCGGCGACACCATTGAGTACGTCAAGCAGTTGCGCCGGAGAATCCAG
____________________________________________________________
consensus AAGGCCTCCATTCTCGGCGACACCATTGAGTACGTCAAGCAGTTGCGCCGGAGAATCCAG
. : . : . : . : . : . :
rJMFF030J13+ GAGCTGGAGGCGCCGACGGAGGTTGACCGGCAGTCGATTACCGGCGGGGTTACACGAAAG
rJMFF010K10+ GAGCTGGAGGCGCCGACGGAGGTTGACCGGCAGTCGATTACCGGCGGGGTTACACGAAAG
rJMFF014I24+ GAGCTGGAGGCGCCGACGGAGGTTGACCGGCAGTCGATTACCGGCGGGGTTACACGAAAG
____________________________________________________________
consensus GAGCTGGAGGCGCCGACGGAGGTTGACCGGCAGTCGATTACCGGCGGGGTTACACGAAAG
. : . : . : . : . : . :
rJMFF030J13+ AATCCACCCCAGAAAAGTGGGGCCTCCAGAACTCAGATGGGTCCCAGGCTGAATAAGAGG
rJMFF010K10+ AATCCACCCCAGAAAAGTGGGGCCTCCAGAACTCAGATGGGTCCCAGGCTGAATAAGAGG
rJMFF014I24+ AATCCACCCCAGAAAAGTGGGGCCTCCAGAACTCAGATGGGTCCCAGGCTGAATAAGAGG
rJMFF022P13+ GTCCCAGGCTGAATAAGAGG
____________________________________________________________
consensus AATCCACCCCAGAAAAGTGGGGCCTCCAGAACTCAGATGGGTCCCAGGCTGAATAAGAGG
. : . : . : . : . : . :
rJMFF030J13+ GGGACGAGGACGGCAGAGAGAGGCGGCCGGCCGGAGAATAACACGGAGGAGGACGCGGTG
rJMFF010K10+ GGGACGAGGACGGCAGAGAGAGGCGGCCGGCCGGAGAATAACACGGAGGAGGACGCGGTG
rJMFF014I24+ GGGACGAGGACGGCAGAGAGAGGCGGCCGGCCGGAGAATAACACGGAGGAGGACGCGGTG
rJMFF022P13+ GGGACGAGGACGGCAGAGAGAGGCGGCCGGCCGGAGAATAACACGGAGGAGGACGCGGTG
rJMFF046F02+ GCCGGCCGGAGAATAACACGGAGGAGGACGCGGTG
____________________________________________________________
consensus GGGACGAGGACGGCAGAGAGAGGCGGCCGGCCGGAGAATAACACGGAGGAGGACGCGGTG
. : . : . : . : . : . :
rJMFF030J13+ GTTCAAGTGGAAGTTTCTATCATCGAGAGCGATGCACTGGTGGAGCTGCGATGCACTTAC
rJMFF010K10+ GTTCAAGTGGAAGTTTCTATCATCGAGAGCGATGCACTGGTGGAGCTGCGATGCACTTAC
rJMFF014I24+ GTTCAAGTGGAAGTTTCTATCATCGAGAGCGATGCACTGGTGGAGCTGCGATGCACTTAC
rJMFF022P13+ GTTCAAGTGGAAGTTTCTATCATCGAGAGCGATGCACTGGTGGAGCTGCGATGCACTTAC
rJMFF046F02+ GTTCAAGTGGAAGTTTCTATCATCGAGAGCGATGCACTGGTGGAGCTGCGATGCACTTAC
____________________________________________________________
consensus GTTCAAGTGGAAGTTTCTATCATCGAGAGCGATGCACTGGTGGAGCTGCGATGCACTTAC
. : . : . : . : . : . :
rJMFF030J13+ AGGCAGGGCTTAATCTTGGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
rJMFF010K10+ AGGCAGGGCTTAATCTTGGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
rJMFF014I24+ AGGCAGGGCTTAATCTTGGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
rJMFF022P13+ AGGCAGGGCTTAATCTTGGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
rJMFF048F20+ GGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
rJMFF046F02+ AGGCAGGGCTTAATCTTGGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
____________________________________________________________
consensus AGGCAGGGCTTAATCTTGGATGTCATGCAGATGCTTAAAGAGCTTGGACTTGAAATCACC
. : . : . : . : . : . :
rJMFF030J13+ ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
rJMFF038G22+ TAAAA
rJMFF010K10+ ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
rJMFF014I24+ ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
rJMFF022P13+ ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
rJMFF048F20+ ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
rJMFF046F02+ ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
____________________________________________________________
consensus ACCGTCCAATCTTCTGTTAACGGTGGGATCTTTTGTGCTGAATTGAGAGCTAAGCTAAAA
. : . : . : . : . : . :
rJMFF030J13+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
rJMFF038G22+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
rJMFF010K10+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
rJMFF014I24+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
rJMFF022P13+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
rJMFF048F20+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
rJMFF046F02+ GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
____________________________________________________________
consensus GAAAATATGAAAGGCAGGAAAGCAACAATCATGGAAGTGAAAAAGGCAATTCATAGTATA
. : . : . : . : . : . :
rJMFF030J13+ ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
rJMFF038G22+ ATTCCTCAGTTT
rJMFF010K10+ ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
rJMFF014I24+ ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
rJMFF022P13+ ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
rJMFF048F20+ ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
rJMFF046F02+ ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
____________________________________________________________
consensus ATTCCTCAGTTTTAGCTATGGAGAAATATTCATACATGCATCTGCTGCAAGGTAGCCACT
. : . : . : . : . : . :
rJMFF030J13+ AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGC
rJMFF010K10+ AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGCTGTTA
rJMFF014I24+ AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGCTGTTATTGT
rJMFF022P13+ AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGCTGTTATTGT
rJMFF048F20+ AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGCTGTTATTGT
rJMFF046F02+ AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGCTGTTATTGT
____________________________________________________________
consensus AGTAGTCTAGTCGTGTAAACTCTTGTTGTCACTGTAAATTTATAATACTGCTGTTATTGT
. : . : . : . : . : . :
rJMFF014I24+ TACAATGGAATGGATTACACAAAAAA
rJMFF022P13+ TACAATGGAATGGATTACACAAAAAA
rJMFF048F20+ TACAATGGAATGGATTACAC
rJMFF046F02+ TACAATGGAATGGATTACACAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus TACAATGGAATGGATTACACAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG