Contig 006962:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045I20Sequence644006962 (2)ref|XP_009785659.1|4e-47PREDICTED: Werner Syndrome-like exonuclease [Nicotiana sylvestris]634006962 (2)ref|XP_009785659.1|1e-40PREDICTED: Werner Syndrome-like exonuclease [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF045I20-                                  GCTTCTCTCTTTTCTCCTAAAATCCTGAAGACCTAAA
                      ____________________________________________________________
consensus                                    GCTTCTCTCTTTTCTCCTAAAATCCTGAAGACCTAAA
 
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JMFF045I20-           CCTACCTCCATGACCATGGCTATGGAAATCGGCATTGTTGAATACGTTGACCAATCCCCC
                      ____________________________________________________________
consensus             CCTACCTCCATGACCATGGCTATGGAAATCGGCATTGTTGAATACGTTGACCAATCCCCC
 
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JMFF045I20-           GATCTTTTTAACGTTCAATTCCACAGAGAGTGTATCAAAACCTTGGTCACCCATGAAGCC
                      ____________________________________________________________
consensus             GATCTTTTTAACGTTCAATTCCACAGAGAGTGTATCAAAACCTTGGTCACCCATGAAGCC
 
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JMFF045I20-           AGAAAGGTCGATGAGTGGATCTCTGAGGTGGAGGCCATCCATCGCCACCGTCTGAACCAC
                      ____________________________________________________________
consensus             AGAAAGGTCGATGAGTGGATCTCTGAGGTGGAGGCCATCCATCGCCACCGTCTGAACCAC
 
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JMFF045I20-           CTGATCGTCGGCCTCGACGTAGAGTGGCGCCCCAATTTCTCCAAGGCGCAGCAGAACCCG
rJMFF045I20+                                    GCGCCCCAATTTCTCCAAGGCGCAGCAGAACCCG
                      ____________________________________________________________
consensus             CTGATCGTCGGCCTCGACGTAGAGTGGCGCCCCAATTTCTCCAAGGCGCAGCAGAACCCG
 
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JMFF045I20-           GTGGCGACTCTCCAGCTCTGCGTGGGGCGCCGCTGCCTCGTATTCCAACTCCTCTACTGC
rJMFF045I20+          GTGGCGACTCTCCAGCTCTGCGTGGGGCGCCGCTGCCTCGTATTCCAACTCCTCTACTGC
                      ____________________________________________________________
consensus             GTGGCGACTCTCCAGCTCTGCGTGGGGCGCCGCTGCCTCGTATTCCAACTCCTCTACTGC
 
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JMFF045I20-           AGCCGCATCCCGGACAAGCTCGTCAGCTTCCTCGCGAACCCCGCCTACACCTTCGTCGGG
rJMFF045I20+          AGCCGCATCCCGGACAAGCTCGTCAGCTTCCTCGCGAACCCCGCCTACACCTTCGTCGGG
                      ____________________________________________________________
consensus             AGCCGCATCCCGGACAAGCTCGTCAGCTTCCTCGCGAACCCCGCCTACACCTTCGTCGGG
 
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JMFF045I20-           GTCGCGATCGACGGCGACGTGGAGAAGCTGGTGGAAGACTACAATCTGAGTGTGAGGAAG
rJMFF045I20+          GTCGCGATCGACGGCGACGTGGAGAAGCTGGTGGAAGACTACAATCTGAGTGTGAGGAAG
                      ____________________________________________________________
consensus             GTCGCGATCGACGGCGACGTGGAGAAGCTGGTGGAAGACTACAATCTGAGTGTGAGGAAG
 
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JMFF045I20-           GCCGTGGATTTGCGCCCCTAGCTGTGCGGCAGTCCAACGATTCGTCTCTGAAGAACGTTG
rJMFF045I20+          GCCGTGGATTTGCGCCCCTAGCTGTGCGGCAGTCCAACGATTCGTCTCTGAAGAACGTTG
                      ____________________________________________________________
consensus             GCCGTGGATTTGCGCCCCTAGCTGTGCGGCAGTCCAACGATTCGTCTCTGAAGAACGTTG
 
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JMFF045I20-           GATTGAAGGATCTGGTGAGGATTTATCTGGGGGCGGAGATGGTGAAGCCGAAACGGGTGA
rJMFF045I20+          GATTGAAGGATCTGGTGAGGATTTATCTGGGGGCGGAGATGGTGAAGCCGAAACGGGTGA
                      ____________________________________________________________
consensus             GATTGAAGGATCTGGTGAGGATTTATCTGGGGGCGGAGATGGTGAAGCCGAAACGGGTGA
 
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JMFF045I20-           CGATGGGGAGGTGGGAT-AAGAGTTGCT-ACCACAGAGCAGATTCAGTATGCGTGCATTG
rJMFF045I20+          CGATGGGGAGGTGGGATAAAGAGTTGCTAACCACAGAGCAGATTCAGTATGCGTGCATTG
                      ____________________________________________________________
consensus             CGATGGGGAGGTGGGATAAAGAGTTGCTAACCACAGAGCAGATTCAGTATGCGTGCATTG
 
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JMFF045I20-           ATGCTTTTG                                                   
rJMFF045I20+          ATGCTTTTGTGTGTTTTGAAATTGGCAGGATTTTGAATGCTTCTTCTTCTGCTCATTAGA
                      ____________________________________________________________
consensus             ATGCTTTTGTGTGTTTTGAAATTGGCAGGATTTTGAATGCTTCTTCTTCTGCTCATTAGA
 
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rJMFF045I20+          GTAATGACTAATTCACTAGACTATATATGAGGACTGCTTTATTTTGCTAATGCCAACTGC
                      ____________________________________________________________
consensus             GTAATGACTAATTCACTAGACTATATATGAGGACTGCTTTATTTTGCTAATGCCAACTGC
 
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rJMFF045I20+          AGCTGTTATATTTGATTCTGTATTTCTGCAACTATGTAGTAGGAGGAGTGTTATTAAGAT
                      ____________________________________________________________
consensus             AGCTGTTATATTTGATTCTGTATTTCTGCAACTATGTAGTAGGAGGAGTGTTATTAAGAT
 
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rJMFF045I20+          GATCAATTAATTAGTATATTGGGGATTATCTCTAAAAAAAAAAAAAAAACTCTCCAGGGT
                      ____________________________________________________________
consensus             GATCAATTAATTAGTATATTGGGGATTATCTCTAAAAAAAAAAAAAAAACTCTCCAGGGT