| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF023D16 | Sequence | 555 | 000829 (7) | gb|ACJ84523.1| | 8e-101 | unknown [Medicago truncatula] | 762 | 006954 (7) | ref|XP_009770220.1| | 1e-104 | PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris] |
| JMFF024J21 | Sequence | 491 | 000829 (7) | gb|ACJ84523.1| | 7e-85 | unknown [Medicago truncatula] | 736 | 006954 (7) | ref|XP_009770220.1| | 4e-100 | PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris] |
| JMFF025A08 | Sequence | 551 | 000829 (7) | gb|ACJ84523.1| | 4e-100 | unknown [Medicago truncatula] | 738 | 006954 (7) | ref|XP_009770220.1| | 4e-100 | PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris] |
| JMFF038P03 | Sequence | 525 | 000829 (7) | gb|ABO65104.1| | 4e-88 | mitogen-activated protein kinase Naf4, partial [Nicotiana attenuata] | 738 | 006954 (7) | ref|XP_009770220.1| | 9e-77 | PREDICTED: mitogen-activated protein kinase homolog NTF4 [Nicotiana sylvestris] |
| JMFF041M21 | Sequence | 643 | 000829 (7) | gb|KCW63920.1| | 1e-125 | hypothetical protein EUGRSUZ_G01599 [Eucalyptus grandis] | 574 | 006954 (7) | gb|AHX99575.1| | 4e-46 | mitogen-activated protein kinase 6 [Betula platyphylla] |
| JMFF044N23 | Sequence | 636 | 000829 (7) | gb|ACJ84523.1| | 1e-94 | unknown [Medicago truncatula] | 629 | 006954 (7) | gb|AHX99575.1| | 9e-47 | mitogen-activated protein kinase 6 [Betula platyphylla] |
| JMSF031M21 | Sequence | 621 | 000829 (7) | gb|ACJ84523.1| | 3e-62 | unknown [Medicago truncatula] | 672 | 006954 (7) | gb|ABB16418.1| | 7e-120 | mitogen-activated protein kinase Ntf4-2 [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
rJMSF031M21+ TGAAACAGATTTTATGACTGAATATGTA
____________________________________________________________
consensus TGAAACAGATTTTATGACTGAATATGTA
. : . : . : . : . : . :
rJMSF031M21+ GTANCAAGATGGTATCGGGCACCTGAGCTGTTGTTAAATTCTTCTGACTATACTGCCGCA
rJMFF025A08+ CTATACTGCCGCA
rJMFF024J21+ CTATACTGCCGCA
rJMFF038P03+ CTATACTGCCGCA
rJMFF023D16+ CTGAGCTGTTGTTAAATTTTTCTGACTATACTGCCGCA
____________________________________________________________
consensus GTANCAAGATGGTATCGGGCACCTGAGCTGTTGTTAAATTTTTCTGACTATACTGCCGCA
. : . : . : . : . : . :
rJMSF031M21+ ATTGATGTATGGTCAGTAGGCTGCATTTTTATGGAATTGATGGATCGGAAGCCCTTGTTC
rJMFF025A08+ ATTGATGTATGGTCAGTAGGCTGCATTTTTATGGAATTGATGGATCGGAAGCCCTTGTTC
rJMFF024J21+ ATTGATGTATGGTCAGTAGGCTGCATTTTTATGGAATTGATGGATCGGAAGCCCTTGTTC
rJMFF038P03+ ATTGATGTATGGTCAGTAGGCTGCATTTTTATGGAATTGATGGATCGGAAGCCCTTGTTC
rJMFF023D16+ ATTGATGTATGGTCAGTAGGCTGCATTTTTATGGAATTGATGGATCGGAAGCCCTTGTTC
____________________________________________________________
consensus ATTGATGTATGGTCAGTAGGCTGCATTTTTATGGAATTGATGGATCGGAAGCCCTTGTTC
. : . : . : . : . : . :
rJMSF031M21+ CCTGGCAGAGATCACGTGCACCAGTTACGTCTGCTTATGGAGCTGATCGGTACTCCTTCA
rJMFF025A08+ CCTGGCAGAGATCACGTGCACCAGTTACGTCTGCTTATGGAGCTGATCGGTACTCCTTCA
rJMFF024J21+ CCTGGCAGAGATCACGTGCACCAGTTACGTCTGCTTATGGAGCTGATCGGTACTCCTTCA
rJMFF038P03+ CCTGGCAGAGATCACGTGCACCAGTTACGTCTGCTTATGGAGCTGATCGGTACTCCTTCA
rJMFF023D16+ CCTGGCAGAGATCACGTGCACCAGTTACGTCTGCTTATGGAGCTGATCGGTACTCCTTCA
____________________________________________________________
consensus CCTGGCAGAGATCACGTGCACCAGTTACGTCTGCTTATGGAGCTGATCGGTACTCCTTCA
. : . : . : . : . : . :
rJMSF031M21+ GAAGCTGAAATGGAGTTCTTAAATGACAATGCAAAAAGATATATCCGTCAACTTCCTCTA
rJMFF025A08+ GAAGCTGAAATGGAGTTCTTAAATGACAATGCAAAAAGATATATCCGTCAACTTCCTCTA
rJMFF024J21+ GAAGCTGAAATGGAGTTCTTAAATGACAATGCAAAAAGATATATCCGTCAACTTCCTCTA
rJMFF038P03+ GAAGCTGAAATGGAGTTCTTAAATGACAATGCAAAAAGATATATCCGTCAACTTCCTCTA
rJMFF023D16+ GAAGCTGAAATGGAGTTCTTAAATGACAATGCAAAAAGATATATCCGTCAACTTCCTCTA
rJMFF044N23+ TGCAAAAAGATATATCCGTCAACTTCCTCTA
____________________________________________________________
consensus GAAGCTGAAATGGAGTTCTTAAATGACAATGCAAAAAGATATATCCGTCAACTTCCTCTA
. : . : . : . : . : . :
rJMSF031M21+ TACCGTCGCCAGTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
rJMFF025A08+ TACCGTCGCCAGTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
rJMFF024J21+ TACCGTCGCCAGTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
rJMFF038P03+ TACCGTCGCCAGTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
rJMFF023D16+ TACCGTCGCCAGTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
rJMFF041M21+ TACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
rJMFF044N23+ TACCGTC-TGTCTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
____________________________________________________________
consensus TACCGTCGCCAGTCATTTACTGAAAAATTTCCCCATGTGCACCCTGCTGCTATTGATCTT
. : . : . : . : . : . :
rJMSF031M21+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
rJMFF025A08+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
rJMFF024J21+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
rJMFF038P03+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
rJMFF023D16+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
rJMFF041M21+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
rJMFF044N23+ GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
____________________________________________________________
consensus GTTGAGAAAATGTTGACATTTGATCCTAGAAAAAGAATAACAGTTGAAAATGCACTTGCA
. : . : . : . : . : . :
rJMSF031M21+ CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
rJMFF025A08+ CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
rJMFF024J21+ CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
rJMFF038P03+ CATCCCTACCCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
rJMFF023D16+ CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
rJMFF041M21+ CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
rJMFF044N23+ CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
____________________________________________________________
consensus CATCCCTA-CCTAACGTCTCTGCACGACATTAGCGATGAACCTTCATGCTTGAATCCTTT
. : . : . : . : . : . :
rJMSF031M21+ TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
rJMFF025A08+ TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
rJMFF024J21+ TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
rJMFF038P03+ TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
rJMFF023D16+ TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
rJMFF041M21+ TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
rJMFF044N23+ TAGCTTCGACTTCGAGCAGCATGCCCTCCCCGAGGAACAAATGAAGGAGCTGATTTACAG
____________________________________________________________
consensus TAGCTTCGACTTCGAGCAGCATGCCCTCACCGAGGAACAAATGAAGGAGCTGATTTACAG
. : . : . : . : . : . :
rJMSF031M21+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
rJMFF025A08+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
rJMFF024J21+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
rJMFF038P03+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
rJMFF023D16+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
rJMFF041M21+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
rJMFF044N23+ AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
____________________________________________________________
consensus AGAGGCTCTTGCATTTAATCCCGAGTATCTGCACATGTGAAGAACCAATGATTGTAGAAT
. : . : . : . : . : . :
rJMSF031M21+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
rJMFF025A08+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
rJMFF024J21+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
rJMFF038P03+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
rJMFF023D16+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
rJMFF041M21+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
rJMFF044N23+ GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
____________________________________________________________
consensus GTTTGTTGTATTTGTATTATCATGTTTTATCCATCTGATCATTATTCTCATCTGTGTGTA
. : . : . : . : . : . :
rJMSF031M21+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATA
rJMFF025A08+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
rJMFF024J21+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
rJMFF038P03+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
rJMFF023D16+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
rJMFF041M21+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
rJMFF044N23+ TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
____________________________________________________________
consensus TATATATGTGCACGCCATTGCTACTGAACACCCGAGATAGTGATAGCTCTGGCATTTAAA
. : . : . : . : . : . :
rJMFF025A08+ CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
rJMFF024J21+ CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
rJMFF038P03+ CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
rJMFF023D16+ CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
rJMFF041M21+ CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
rJMFF044N23+ CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
____________________________________________________________
consensus CATTCAATCATTAGAGAATTTGGGTCTTAAAAATCTGTTGTTGTATGAATGAGGCAGGTA
. : . : . : . : . : . :
rJMFF025A08+ AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
rJMFF024J21+ AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
rJMFF038P03+ AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
rJMFF023D16+ AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
rJMFF041M21+ AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
rJMFF044N23+ AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
____________________________________________________________
consensus AGCTATGTATGTGTTATATTTGTTGAAGTCAGCTAGATAGCTGATTAGTTGGCATGTCCA
. : . : . : . : . : . :
rJMFF025A08+ TAAAT
rJMFF024J21+ TAAA
rJMFF038P03+ TAAAT
rJMFF023D16+ TAAAT
rJMFF041M21+ TAAATGTTATCTGTATCATTTTT
rJMFF044N23+ TAAATGTTATCTGTATCATTTTTXXXXXXXXXXXXXXXXXXXXXXXXXXCTCTCCAGGGT
____________________________________________________________
consensus TAAATGTTATCTGTATCATTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTCCAGGGT