clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF004G07 | Sequence | 506 | 011469 (5) | ref|XP_009786662.1| | 5e-49 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr | 700 | 006950 (5) | ref|XP_009601250.1| | 1e-49 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos |
JMFF040J11 | Sequence | 566 | 011469 (5) | ref|XP_009786662.1| | 1e-57 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr | 690 | 006950 (5) | ref|XP_009601250.1| | 5e-86 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos |
JMFF044H08 | Sequence | 640 | 011469 (5) | ref|XP_009786662.1| | 3e-84 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr | 620 | 006950 (5) | ref|XP_009601250.1| | 5e-54 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos |
JMSF019J14 | Sequence | 530 | 011469 (5) | ref|XP_009786662.1| | 1e-71 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr | 754 | 006950 (5) | ref|XP_009601250.1| | 2e-121 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos |
JMSF032M10 | Sequence | 616 | 011469 (5) | ref|XP_009786662.1| | 4e-71 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Nicotiana sylvestr | 746 | 006950 (5) | ref|XP_009601250.1| | 2e-100 | PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Nicotiana tomentos |
This contig is upended
. : . : . : . : . : . :
rJMSF019J14+ CAAAGTGGGATGCCGATTTCTATGTCAAGGTTGATGAT
____________________________________________________________
consensus CAAAGTGGGATGCCGATTTCTATGTCAAGGTTGATGAT
. : . : . : . : . : . :
rJMSF019J14+ GATGTCCATGTCAATTTGGGTATGCTCGCTGCAACTCTTGGCCGCCACCGGTCGAAGCCC
____________________________________________________________
consensus GATGTCCATGTCAATTTGGGTATGCTCGCTGCAACTCTTGGCCGCCACCGGTCGAAGCCC
. : . : . : . : . : . :
rJMSF019J14+ AGAGTTTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCCCAAAAGAATGTCAAATAC
____________________________________________________________
consensus AGAGTTTACATTGGGTGTATGAAATCTGGACCTGTTCTTTCCCAAAAGAATGTCAAATAC
. : . : . : . : . : . :
rJMSF019J14+ CATGAACCAGAGTCTTGGAAATTTGGAGAAGAAGGGAACAAATACTTTCGACATGCTACT
____________________________________________________________
consensus CATGAACCAGAGTCTTGGAAATTTGGAGAAGAAGGGAACAAATACTTTCGACATGCTACT
. : . : . : . : . : . :
rJMSF019J14+ GGGCAAATTTATGCCATTTCAAAGGATTTAGCTACATACATTTCAATCAACCAGCCAATC
rJMSF032M10+ GCCAATC
rJMFF040J11+ GCCAATC
rJMFF004G07+ GCCAATC
rJMFF044H08+ TTTCAATCAACCAGCCAATC
____________________________________________________________
consensus GGGCAAATTTATGCCATTTCAAAGGATTTAGCTACATACATTTCAATCAACCAGCCAATC
. : . : . : . : . : . :
rJMSF019J14+ TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMSF032M10+ TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMFF040J11+ TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMFF004G07+ TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
rJMFF044H08+ TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
____________________________________________________________
consensus TTGCACAAGTATGCTAATGAAGATGTTTCCCTGGGTGCTTGGTTCATTGGTCTTGAAGTT
. : . : . : . : . : . :
rJMSF019J14+ GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMSF032M10+ GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMFF040J11+ GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMFF004G07+ GACCGTATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
rJMFF044H08+ GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
____________________________________________________________
consensus GACCATATTGATGAACGAACCATGTGTTGTGGAACTCCACCAGACTGTGAGTGGAAGGCC
. : . : . : . : . : . :
rJMSF019J14+ CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMSF032M10+ CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMFF040J11+ CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMFF004G07+ CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
rJMFF044H08+ CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
____________________________________________________________
consensus CAGGCAGGCAATGTATGTGTAGCTTCCTTCGACTGGAGCTGCAGTGGAATTTGCAAATCA
. : . : . : . : . : . :
rJMSF019J14+ GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMSF032M10+ GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMFF040J11+ GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMFF004G07+ GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
rJMFF044H08+ GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
____________________________________________________________
consensus GTAGAGAAGATAAAGTTTGTGCATGAAAAGTGTGGCGAGGGTGAAGAAACTCTCTGGAAT
. : . : . : . : . : . :
rJMSF019J14+ GCCCTATTCTAGACTTCTAGTTCAAC-AGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
rJMSF032M10+ GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
rJMFF040J11+ GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATCC
rJMFF004G07+ GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
rJMFF044H08+ GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
____________________________________________________________
consensus GCCCTATTCTAGACTTCTAGTTCAACAAGGGATTTCTGGCAAGCTAAGAAGCTGTAATTC
. : . : . : . : . : . :
rJMSF019J14+ AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMSF032M10+ AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMFF040J11+ AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMFF004G07+ AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
rJMFF044H08+ AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
____________________________________________________________
consensus AAGGTCAGGCCTTTGGGGGCATATATAGATCACAGCATGCAATGTATGATGTAAGAATTA
. : . : . : . : . : . :
rJMSF019J14+ TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMSF032M10+ TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMFF040J11+ TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMFF004G07+ TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
rJMFF044H08+ TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
____________________________________________________________
consensus TAGCTGTTGACTAACCTTTATTACCAGAAAGGGAGAGATCAAGATTTGGGTGTAGATATT
. : . : . : . : . : . :
rJMSF019J14+ AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTT
rJMSF032M10+ AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
rJMFF040J11+ AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
rJMFF004G07+ AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
rJMFF044H08+ AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
____________________________________________________________
consensus AGATCTGTTGTTGCCTAGATGTGGGTTTGGGGAAGGGGAGGATAAAGCTTATAGCTTTGT
. : . : . : . : . : . :
rJMSF032M10+ GAAGGGAGACATTCAAATATTGAGTTATTCAAATATGTTGGGTTTATTGAGTATTTGTAA
rJMFF040J11+ GAAGGGAGACATTCAAATATTGAGTTATTCAAATATGTTGGGTTTATTGAGTATTTGTAA
rJMFF004G07+ GAAGGGAGACATTCAAATAT
rJMFF044H08+ GAAGGGAGACATTCAAATATTGAGTTATTCAAGTATGTTGGGTTTATTGAGTATTTGTAA
____________________________________________________________
consensus GAAGGGAGACATTCAAATATTGAGTTATTCAAATATGTTGGGTTTATTGAGTATTTGTAA
. : . : . : . : . : . :
rJMSF032M10+ GTGC
rJMFF040J11+ GTGC
rJMFF044H08+ GTGCAGTGGTATTTTTTCTGGTTCCACGTTTGACAATAAAAATTCTATGATGAAAAAAAG
____________________________________________________________
consensus GTGCAGTGGTATTTTTTCTGGTTCCACGTTTGACAATAAAAATTCTATGATGAAAAAAAG