Contig 006941:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J10Sequence589010678 (11)dbj|BAJ14794.1|7e-97hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat734006941 (7)dbj|BAJ14794.1|1e-124hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF015A02Sequence534010678 (11)dbj|BAJ14794.1|2e-101hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat706006941 (7)dbj|BAJ14794.1|5e-143hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF019H02Sequence561010678 (11)dbj|BAJ14794.1|8e-95hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat677006941 (7)dbj|BAJ14794.1|8e-152hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF032G21Sequence590010678 (11)dbj|BAJ14794.1|1e-102hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat737006941 (7)dbj|BAJ14794.1|8e-126hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF043K24Sequence630010678 (11)dbj|BAJ14794.1|4e-113hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat619006941 (7)dbj|BAJ14794.1|9e-99hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFN006G02Sequence583006941 (7)dbj|BAJ14794.1|5e-123hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMSF021M23Sequence676010678 (11)dbj|BAJ14794.1|1e-124hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat762006941 (7)dbj|BAJ14794.1|8e-154hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF032G21+ AACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
rJMFF015A02+ TATTCAAGT
rJMFF019H02+ AACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
rJMSF021M23+ TCAAGGCCTCCCAACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
rJMFF003J10+ TTCAAGT
                      ____________________________________________________________
consensus TCAAGGCCTCCCAACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
 
. : . : . : . : . : . :
rJMFF032G21+ TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
rJMFF015A02+ TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
rJMFF019H02+ TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
JMFN006G02- CACCGTCG
rJMSF021M23+ TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
rJMFF003J10+ TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
                      ____________________________________________________________
consensus TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
 
. : . : . : . : . : . :
rJMFF032G21+ CCTTACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMFF015A02+ CT-TACAGCTCNTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMFF019H02+ CC-TACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
JMFN006G02- CC-TACAGCTTCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMSF021M23+ CC-TACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMFF003J10+ CCTTACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
                      ____________________________________________________________
consensus CC-TACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
 
. : . : . : . : . : . :
rJMFF032G21+ GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF015A02+ GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF019H02+ GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
JMFN006G02- GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMSF021M23+ GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF003J10+ GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF043K24+ CGACGGCCGTTCCAGGCTG
                      ____________________________________________________________
consensus GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
 
. : . : . : . : . : . :
rJMFF032G21+ CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF015A02+ CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF019H02+ CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
JMFN006G02- CGGCCTTCCCTTCCGACTGGCTATTTCGGTAACGTCATCTTCACGGGCACCCCCATAGCC
rJMSF021M23+ CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF003J10+ CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF043K24+ CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
                      ____________________________________________________________
consensus CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
 
. : . : . : . : . : . :
rJMFF032G21+ GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF015A02+ GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF019H02+ GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
JMFN006G02- GGCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGGCAGCAAGATTCACGATGCG
rJMSF021M23+ GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF003J10+ GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF043K24+ GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
                      ____________________________________________________________
consensus GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
 
. : . : . : . : . : . :
rJMFF032G21+ CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF015A02+ CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF019H02+ CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
JMFN006G02- CTGGGCAGGATGGACAACGATTACCTTCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMSF021M23+ CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF003J10+ CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF043K24+ CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
                      ____________________________________________________________
consensus CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
 
. : . : . : . : . : . :
rJMFF032G21+ GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF015A02+ GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF019H02+ GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
JMFN006G02- GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMSF021M23+ GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF003J10+ GGTCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF043K24+ GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
                      ____________________________________________________________
consensus GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
 
. : . : . : . : . : . :
rJMFF032G21+ AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF015A02+ AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF019H02+ AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
JMFN006G02- AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMSF021M23+ AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF003J10+ AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF043K24+ AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
                      ____________________________________________________________
consensus AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
 
. : . : . : . : . : . :
rJMFF032G21+ GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF015A02+ GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF019H02+ GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
JMFN006G02- GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTGATGCTGCCCAGTCCTGGAAATGAT
rJMSF021M23+ GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF003J10+ GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF043K24+ GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
                      ____________________________________________________________
consensus GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
 
. : . : . : . : . : . :
rJMFF032G21+ GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF015A02+ GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF019H02+ GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
JMFN006G02- GGCAGCTTATCAATCGGCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAGAGACTTC
rJMSF021M23+ GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF003J10+ GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF043K24+ GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
                      ____________________________________________________________
consensus GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
 
. : . : . : . : . : . :
rJMFF032G21+ CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF015A02+ CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF019H02+ CTGTATGATATTTGAACCGACAAATTAAAACAA
JMFN006G02- CTGTATGATATTTGAACCGNACAATTAAAACAACAT
rJMSF021M23+ CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF003J10+ CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF043K24+ CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
                      ____________________________________________________________
consensus CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
 
. : . : . : . : . : . :
rJMFF032G21+ GTTAATGTCTGGTTTTTTCCTTGGACAAATG
rJMFF015A02+ GTTAATGTCTGGTTTTTTCCTTGGACAAATG
rJMSF021M23+ GTTAATGTCTGGTTTTTTCC-TGGACAAATGGACAATATATCT
rJMFF003J10+ GTTAATGTCTGGTTTTTTCCTTGGACAAATGGACAATATATCTTGGAGTTTAATATATAG
rJMFF043K24+ GTTAATGTCTGGTTTTTTCCTTGGACAAATGGACAATATATCTTGGAGTTTAATATATAG
                      ____________________________________________________________
consensus GTTAATGTCTGGTTTTTTCCTTGGACAAATGGACAATATATCTTGGAGTTTAATATATAG
 
. : . : . : . : . : . :
rJMFF003J10+ TAAGTGA
rJMFF043K24+ TAAGTGAGATCTTTGATAATAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus TAAGTGAGATCTTTGATAATAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG