Contig 006941:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J10Sequence589010678 (11)dbj|BAJ14794.1|7e-97hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat734006941 (7)dbj|BAJ14794.1|1e-124hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF015A02Sequence534010678 (11)dbj|BAJ14794.1|2e-101hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat706006941 (7)dbj|BAJ14794.1|5e-143hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF019H02Sequence561010678 (11)dbj|BAJ14794.1|8e-95hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat677006941 (7)dbj|BAJ14794.1|8e-152hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF032G21Sequence590010678 (11)dbj|BAJ14794.1|1e-102hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat737006941 (7)dbj|BAJ14794.1|8e-126hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFF043K24Sequence630010678 (11)dbj|BAJ14794.1|4e-113hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat619006941 (7)dbj|BAJ14794.1|9e-99hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMFN006G02Sequence583006941 (7)dbj|BAJ14794.1|5e-123hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat
JMSF021M23Sequence676010678 (11)dbj|BAJ14794.1|1e-124hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat762006941 (7)dbj|BAJ14794.1|8e-154hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyltransferase [Ipomoea bat

Alignment

This contig is upended


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rJMFF032G21+                         AACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
rJMFF015A02+                                                             TATTCAAGT
rJMFF019H02+                         AACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
rJMSF021M23+             TCAAGGCCTCCCAACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
rJMFF003J10+                                                               TTCAAGT
                      ____________________________________________________________
consensus                TCAAGGCCTCCCAACCGCAGAATGCAACGTCAGACACGGCGGTCTCCATATTCAAGT
 
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rJMFF032G21+          TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
rJMFF015A02+          TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
rJMFF019H02+          TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
JMFN006G02-                                                               CACCGTCG
rJMSF021M23+          TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
rJMFF003J10+          TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
                      ____________________________________________________________
consensus             TATCGAGAGATGAGATCAGTGCCCTGAAAGCCAAGTCCAAGGAAGACGGCAACACCGTCG
 
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rJMFF032G21+          CCTTACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMFF015A02+          CT-TACAGCTCNTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMFF019H02+          CC-TACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
JMFN006G02-           CC-TACAGCTTCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMSF021M23+          CC-TACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
rJMFF003J10+          CCTTACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
                      ____________________________________________________________
consensus             CC-TACAGCTCCTACGAAATGCTGGCTGGCCATGTCTGGCGTTGCGTGTGCCGGGCACGT
 
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rJMFF032G21+          GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF015A02+          GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF019H02+          GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
JMFN006G02-           GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMSF021M23+          GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF003J10+          GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
rJMFF043K24+                                                   CGACGGCCGTTCCAGGCTG
                      ____________________________________________________________
consensus             GGGCTGACGGAGGATCAAGAAACCAAGCTGTACATAGCCACCGACGGCCGTTCCAGGCTG
 
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rJMFF032G21+          CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF015A02+          CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF019H02+          CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
JMFN006G02-           CGGCCTTCCCTTCCGACTGGCTATTTCGGTAACGTCATCTTCACGGGCACCCCCATAGCC
rJMSF021M23+          CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF003J10+          CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
rJMFF043K24+          CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
                      ____________________________________________________________
consensus             CGGCCTTCCCTTCCGACTGGCTATTTCGGCAACGTCATCTTCACGGCCACCCCCATAGCC
 
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rJMFF032G21+          GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF015A02+          GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF019H02+          GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
JMFN006G02-           GGCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGGCAGCAAGATTCACGATGCG
rJMSF021M23+          GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF003J10+          GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
rJMFF043K24+          GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
                      ____________________________________________________________
consensus             GTCGCCGGCGACCTCCAATCCAAGCCTGTCTGGTTCGCGGCCAGCAAGATTCACGATGCG
 
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rJMFF032G21+          CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF015A02+          CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF019H02+          CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
JMFN006G02-           CTGGGCAGGATGGACAACGATTACCTTCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMSF021M23+          CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF003J10+          CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
rJMFF043K24+          CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
                      ____________________________________________________________
consensus             CTGGGCAGGATGGACAACGATTACCTCCGATCAGCGCTGGACTACCTGGAATTGCAGCCG
 
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rJMFF032G21+          GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF015A02+          GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF019H02+          GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
JMFN006G02-           GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMSF021M23+          GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF003J10+          GGTCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
rJMFF043K24+          GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
                      ____________________________________________________________
consensus             GATCTGAAAGCTCTGGTTCGCGGCGCACATACTTTCCGGTGCCCAAATCTGGGGATTACG
 
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rJMFF032G21+          AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF015A02+          AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF019H02+          AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
JMFN006G02-           AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMSF021M23+          AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF003J10+          AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
rJMFF043K24+          AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
                      ____________________________________________________________
consensus             AGCTGGGTTAGGCTGCCGATCCACGACGCCGATTTCGGATGGGGGAGGCCCATCTTTATG
 
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rJMFF032G21+          GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF015A02+          GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF019H02+          GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
JMFN006G02-           GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTGATGCTGCCCAGTCCTGGAAATGAT
rJMSF021M23+          GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF003J10+          GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
rJMFF043K24+          GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
                      ____________________________________________________________
consensus             GGGCCGGGAGGGATTGCTTATGAAGGGCTGAGCTTCATGCTGCCCAGTCCTGTAAATGAT
 
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rJMFF032G21+          GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF015A02+          GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF019H02+          GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
JMFN006G02-           GGCAGCTTATCAATCGGCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAGAGACTTC
rJMSF021M23+          GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF003J10+          GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
rJMFF043K24+          GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
                      ____________________________________________________________
consensus             GGCAGCTTATCAATCGCCATTTCTTTGCAGGAAGAGCATATGAAACTCTTCAAAGACTTC
 
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rJMFF032G21+          CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF015A02+          CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF019H02+          CTGTATGATATTTGAACCGACAAATTAAAACAA                           
JMFN006G02-           CTGTATGATATTTGAACCGNACAATTAAAACAACAT                        
rJMSF021M23+          CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF003J10+          CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
rJMFF043K24+          CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
                      ____________________________________________________________
consensus             CTGTATGATATTTGAACCGACAAATTAAAACAACATCTGCTGTCCGGTTGTACCCGGCTT
 
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rJMFF032G21+          GTTAATGTCTGGTTTTTTCCTTGGACAAATG                             
rJMFF015A02+          GTTAATGTCTGGTTTTTTCCTTGGACAAATG                             
rJMSF021M23+          GTTAATGTCTGGTTTTTTCC-TGGACAAATGGACAATATATCT                 
rJMFF003J10+          GTTAATGTCTGGTTTTTTCCTTGGACAAATGGACAATATATCTTGGAGTTTAATATATAG
rJMFF043K24+          GTTAATGTCTGGTTTTTTCCTTGGACAAATGGACAATATATCTTGGAGTTTAATATATAG
                      ____________________________________________________________
consensus             GTTAATGTCTGGTTTTTTCCTTGGACAAATGGACAATATATCTTGGAGTTTAATATATAG
 
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rJMFF003J10+          TAAGTGA                                                     
rJMFF043K24+          TAAGTGAGATCTTTGATAATAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
                      ____________________________________________________________
consensus             TAAGTGAGATCTTTGATAATAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG