Contig 006940:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022L10Sequence511009521 (3)ref|XP_006361560.1|118PREDICTED: uncharacterized protein LOC102581593 [Solanum tuberosum]692006940 (3)ref|XP_009766372.1|7e-77PREDICTED: uncharacterized protein LOC104217757 isoform X2 [Nicotiana sylvestri
JMFF043J23Sequence635009521 (3)ref|XP_006361560.1|148PREDICTED: uncharacterized protein LOC102581593 [Solanum tuberosum]604006940 (3)ref|XP_009766372.1|3e-53PREDICTED: uncharacterized protein LOC104217757 isoform X2 [Nicotiana sylvestri
JMSF044N07Sequence675009521 (3)ref|XP_006361560.1|164PREDICTED: uncharacterized protein LOC102581593 [Solanum tuberosum]704006940 (3)ref|XP_009766372.1|3e-81PREDICTED: uncharacterized protein LOC104217757 isoform X2 [Nicotiana sylvestri

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF044N07+ GTGAAGTGTCTACAAGAAGTGGAAGAGGGAAACCACACC
                      ____________________________________________________________
consensus GTGAAGTGTCTACAAGAAGTGGAAGAGGGAAACCACACC
 
. : . : . : . : . : . :
rJMSF044N07+ ACTAGGAACGTTTCTTTACTTCCACTATCTGAAGGAGGGTATCTCGCAGATACTCCGGGA
rJMFF022L10+ GGAACGTTTCTTTACTTCCACTATCTGAAGGAGGGTATCTCGCAGATACTCCGGGA
                      ____________________________________________________________
consensus ACTAGGAACGTTTCTTTACTTCCACTATCTGAAGGAGGGTATCTCGCAGATACTCCGGGA
 
. : . : . : . : . : . :
rJMSF044N07+ TTCTGCCATCCTAGTTTGATGAAAGTGACAAAGCAATCTCTTGCAGAACATTTTCCTGAG
rJMFF022L10+ TTCTGCCATCCTAGTTTGATGAAAGTGACAAAGCAATCTCTTGCAGAACATTTTCCTGAG
rJMFF043J23+ TGAG
                      ____________________________________________________________
consensus TTCTGCCATCCTAGTTTGATGAAAGTGACAAAGCAATCTCTTGCAGAACATTTTCCTGAG
 
. : . : . : . : . : . :
rJMSF044N07+ ATCCAAAAAATGCTTAAAGAAAAAGAACCAGCAAAGTGTTCTTTCAGCAACTGCTTACAT
rJMFF022L10+ ATCCAAAAAATGCTTAAAGAAAAAGAACCAGCAAAGTGTTCTTTCAGCAACTGCTTACAT
rJMFF043J23+ ATCCAAAAAATGCTTAAAGAAAAAGAACCAGCAAAGTGTTCTTTCAGCAACTGCTTACAT
                      ____________________________________________________________
consensus ATCCAAAAAATGCTTAAAGAAAAAGAACCAGCAAAGTGTTCTTTCAGCAACTGCTTACAT
 
. : . : . : . : . : . :
rJMSF044N07+ CTTGGTGAACCGGGGTGCCTTGTTGGAGGAGACTGGGAAAGATACCCGTACTACCTTCAG
rJMFF022L10+ CTTGGTGAACCGGGGTGCCTTGTTGGAGGAGACTGGGAAAGATACCCGTACTACCTTCAG
rJMFF043J23+ CTTGGTGAACCGGGGTGCCTTGTTGGAGGAGACTGGGAAAGATACCCGTACTACCTTCAG
                      ____________________________________________________________
consensus CTTGGTGAACCGGGGTGCCTTGTTGGAGGAGACTGGGAAAGATACCCGTACTACCTTCAG
 
. : . : . : . : . : . :
rJMSF044N07+ TTGCTTGATGAAATCAAAATCAGAGAGGAGTTTCAGCTTAGGGTACTGGGGACTAAACGA
rJMFF022L10+ TTGCTTGATGAAATCAAAATCAGAGAGGAGTTTCAGCTTAGGGTACTGGGGACTAAACGA
rJMFF043J23+ TTGCTTGATGAAATCAAAATCAGAGAGGAGTTTCAGCTTAGGGTACTGGGGACTAAACGA
                      ____________________________________________________________
consensus TTGCTTGATGAAATCAAAATCAGAGAGGAGTTTCAGCTTAGGGTACTGGGGACTAAACGA
 
. : . : . : . : . : . :
rJMSF044N07+ GAAAGTGATGTGAGGTATAAAGTAGGAGACAAAGGCGTTATACAAGCTGAACCGCGCTTA
rJMFF022L10+ GAAAGTGATGTGAGGTATAAAGTAGGAGACAAAGGCGTTATACAAGCTGAACCGCGCTTA
rJMFF043J23+ GAAAGTGATGTGAGGTATAAAGTAGGAGACAAAGGCGTTATACAAGCTGAACCGCGCTTA
                      ____________________________________________________________
consensus GAAAGTGATGTGAGGTATAAAGTAGGAGACAAAGGCGTTATACAAGCTGAACCGCGCTTA
 
. : . : . : . : . : . :
rJMSF044N07+ GAACCAAAGAAGCACAGGAGACAATCTCGTAAGATGCTGAACCAATCAGTCTTAGATGAG
rJMFF022L10+ GAACCAAAGAAGCACAGGAGACAATCTCGTAAGATGCTGAACCAATCAGTCTTAGATGAG
rJMFF043J23+ GAACCAAAGAAGCACAGGAGACAATCTCGTAAGATGCTGAACCAATCAGTCTTAGATGAG
                      ____________________________________________________________
consensus GAACCAAAGAAGCACAGGAGACAATCTCGTAAGATGCTGAACCAATCAGTCTTAGATGAG
 
. : . : . : . : . : . :
rJMSF044N07+ TTGGATGAACTTGATGATGATGATGAAGACATACTGGATGATGACAACCCAGTATTGAGA
rJMFF022L10+ TTGGATGAACTTGATGATGATGATGAAGACATACTGGATGATGACAACCCAGTATTGAGA
rJMFF043J23+ TTGGATGAACTTGATGATGATGATGAAGACATACTGGATGATGACAACCCAGTATTGAGA
                      ____________________________________________________________
consensus TTGGATGAACTTGATGATGATGATGAAGACATACTGGATGATGACAACCCAGTATTGAGA
 
. : . : . : . : . : . :
rJMSF044N07+ GCAATGAAGCAAGAAAACTTGTAGGATGAAATTCGATCATATGGTTGGGATTTCTATGGA
rJMFF022L10+ GCAATGAAGCAAGAAAACTTGTAGGATGAAATTCGATCATATGGTTGGGATTTCTATGGA
rJMFF043J23+ GCAATGAAGCAAGAAAACTTGTAGGATGAAATTCGATCATATGGTTGGGATTTCTATGGA
                      ____________________________________________________________
consensus GCAATGAAGCAAGAAAACTTGTAGGATGAAATTCGATCATATGGTTGGGATTTCTATGGA
 
. : . : . : . : . : . :
rJMSF044N07+ CGACAGCAAATCAACCATTGTTAATATGGCTAGAGTGTAAAGAGAGGTAAATGTAAATTC
rJMFF022L10+ CGACAGCAAATCAACCATTGTTAATATGGCTAGAGTGTAAAGAGAGGTAAATGTAAATTC
rJMFF043J23+ CGACAGCAAATCAACCATTGTTAATATGGCTAGAGTGTAAAGAGAGGTAAATGTAAATTC
                      ____________________________________________________________
consensus CGACAGCAAATCAACCATTGTTAATATGGCTAGAGTGTAAAGAGAGGTAAATGTAAATTC
 
. : . : . : . : . : . :
rJMSF044N07+ TGCTTCGAGCTGAATAGTTAAGGTGAGTTGAAGCTATGATGATCTTTTTGGTTGGTTATG
rJMFF022L10+ TGCTTCGAGCTGAATAGTTAAGGTGAGTTGAAGCTATGATGATCTTTTTGGTTGGTTATG
rJMFF043J23+ TGCTTCGAGCTGAATAGTTAAGGTGAGTTGAAGCTATGATGATCTTTTTGGTTGGTTATG
                      ____________________________________________________________
consensus TGCTTCGAGCTGAATAGTTAAGGTGAGTTGAAGCTATGATGATCTTTTTGGTTGGTTATG
 
. : . : . : . : . : . :
rJMSF044N07+ GCTTC
rJMFF022L10+ GCTTCAGCTGTGTACATAGCATGGATATTAACCAAT
rJMFF043J23+ GCTTCAGCTGTGTACATAGCATGGATATTAACCAATAAATGAGCTTTGTACTGTTAATGC
                      ____________________________________________________________
consensus GCTTCAGCTGTGTACATAGCATGGATATTAACCAATAAATGAGCTTTGTACTGTTAATGC