Contig 006938:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF043I18Sequence640006938 (6)ref|XP_009611217.1|5e-94PREDICTED: ras-related protein RABA5b [Nicotiana tomentosiformis]483006938 (6)ref|XP_004247033.1|7e-20PREDICTED: ras-related protein RABA5b-like [Solanum lycopersicum]
JMSF006E17Sequence466000599 (2)364006938 (6)ref|XP_009767908.1|3e-19PREDICTED: ras-related protein RABA5b-like [Nicotiana sylvestris]
JMSF006G19Sequence418006938 (6)emb|CDP03946.1|1e-55unnamed protein product [Coffea canephora]
JMSF013D04Sequence347006938 (6)emb|CDP03946.1|9e-40unnamed protein product [Coffea canephora]748006938 (6)ref|XP_009767908.1|5e-123PREDICTED: ras-related protein RABA5b-like [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF006G19- GCGA
                      ____________________________________________________________
consensus GCGA
 
. : . : . : . : . : . :
JMSF013D04- GATTCTTTTCCTTACAGATAAAGATTACGGGCTGCTGCGTTTACTCTCTCTGT
JMSF006G19- AATCTTTGATTCTTTTCCTTACAGATAAAGATTACGGGCTGCTGCGTTTACTCTCTCTGT
JMFF043I18- GT
                      ____________________________________________________________
consensus AATCTTTGATTCTTTTCCTTACAGATAAAGATTACGGGCTGCTGCGTTTACTCTCTCTGT
 
. : . : . : . : . : . :
JMSF013D04- AACCCAGAACTTCTTCTTCTCTTCTGAGCAAGAAAGAGAGAGAGAGAGAGAGAGGGAATG
JMSF006G19- AACCCAGAACTTCTTCTTCTCTTCTGAGCAAGAAAGAGAGAGAGAGAGAGAGAGGGAATG
JMFF043I18- AACCCAGAACTTCTTCTTCTCTTCTGAGCAAGAAAGAGAGAGAGAGAGAGAGAGGGAATG
rJMSF013D04+ AGAGAGAGAGAGAGAGAGGGAATG
                      ____________________________________________________________
consensus AACCCAGAACTTCTTCTTCTCTTCTGAGCAAGAAAGAGAGAGAGAGAGAGAGAGGGAATG
 
. : . : . : . : . : . :
JMSF013D04- GGGGAGGAAGAAGGGGAGGAGTACCTTTTCAAGGTGGTAGTAATCGGCGACTCGGCGGTG
JMSF006G19- GGGGAGGAAGAAGGGGAGGAGTACCTTTTCAAGGTGGTAGTAATCGGCGACTCGGCGGTG
JMFF043I18- GGGGAGGAAGAAGGGGAGGAGTACCTTTTCAAGGTGGTAGTAATCGGCGACTCGGCGGTG
rJMSF013D04+ GGGGAGGAAGAAGGGGAGGAGTACCTTTTCAAGGTGGTAGTAATCGGCGACTCGGCGGTG
                      ____________________________________________________________
consensus GGGGAGGAAGAAGGGGAGGAGTACCTTTTCAAGGTGGTAGTAATCGGCGACTCGGCGGTG
 
. : . : . : . : . : . :
JMSF013D04- GGCAAATCCAACTTGCTATCGCGGTTCGCCAGGGACGAGTTCGACCACAACTCCAAAGCC
JMSF006G19- GGCAAATCCAACTTGCTATCGCGGTTCGCCAGGGACGAGTTCGACCACAACTCCAAAGCC
JMFF043I18- GGCAAATCCAACTTGCTATCGCGGTTCGCCAGGGACGAGTTCGACCACAACTCCAAAGCC
rJMSF013D04+ GGCAAATCCAACTTGCTATCGCGGTTCGCCAGGGACGAGTTCGACCACAACTCCAAAGCC
                      ____________________________________________________________
consensus GGCAAATCCAACTTGCTATCGCGGTTCGCCAGGGACGAGTTCGACCACAACTCCAAAGCC
 
. : . : . : . : . : . :
JMSF013D04- ACCATTGGAGTGGAGTTCCAGACGCAGGTGGTGGAGGTCGACGGCAAGGAGGTGAAGGCG
JMSF006G19- ACCATTGGAGTGGAGTTCCAGACGCAGGTGGTGGAGGTCGACGGCAAGGAGGTGAAGGCG
JMFF043I18- ACCATTGGAGTGGAGTTCCAGACGCAGGTGGTGGAGGTCGACGGCAAGGAGGTGAAGGCG
rJMSF013D04+ ACCATTGGAGTGGAGTTCCAGACGCAGGTGGTGGAGGTCGACGGCAAGGAGGTGAAGGCG
                      ____________________________________________________________
consensus ACCATTGGAGTGGAGTTCCAGACGCAGGTGGTGGAGGTCGACGGCAAGGAGGTGAAGGCG
 
. : . : . : . : . : . :
JMSF013D04- CAGGTCTGGGACACCGCCGGCCAAGAACGCTTCCGCGCCGTCACCTCCGCGTA
JMSF006G19- CAGGTCTGGGACACCGCCGGCCAAGAACGCTTCCGCGCCGTCACCTCCGCGTACTACAGA
JMFF043I18- CAGGTCTGGGACACCGCCGGCCAAGAACGCTTCCGCGCCGTCACCTCCGCGTACTACAGA
rJMSF013D04+ CAGGTCTGGGACACCGCCGGCCAAGAACGCTTCCGCGCCGTCACCTCCGCGTACTACAGA
                      ____________________________________________________________
consensus CAGGTCTGGGACACCGCCGGCCAAGAACGCTTCCGCGCCGTCACCTCCGCGTACTACAGA
 
. : . : . : . : . : . :
JMSF006G19- GGCGCCGTCGGCGCCCTCATTGTCTACGACATCACCCGGAAGACAACCTTTGAG
JMFF043I18- GGCGCCGTCGGCGCCCTCATTGTCTACGACATCACCCGGAAGACAACCTTTGAGAACATC
rJMSF013D04+ GGCGCCGTCGGCGCCCTCATTGTCTACGACATCACCCGGAAGACAACCTTTGAGAACATC
                      ____________________________________________________________
consensus GGCGCCGTCGGCGCCCTCATTGTCTACGACATCACCCGGAAGACAACCTTTGAGAACATC
 
. : . : . : . : . : . :
JMFF043I18- AAACGCTGGCTCGAAGAGCTCAACACTCATTGTGATACTACGGTGGCAAGGATGCTGGTT
rJMSF013D04+ AAACGCTGGCTCGAAGAGCTCAACACTCATTGTGATACTACGGTGGCAAGGATGCTGGTT
                      ____________________________________________________________
consensus AAACGCTGGCTCGAAGAGCTCAACACTCATTGTGATACTACGGTGGCAAGGATGCTGGTT
 
. : . : . : . : . : . :
JMFF043I18- GGAAACAAGTGCGATTTGGAGAGCATTCGGGATGTGAGCGTGGAAGAGGGCAAGCTCCTT
rJMSF013D04+ GGAAACAAGTGCGATTTGGAGAGCATTCGGGATGTGAGCGTGGAAGAGGGCAAGCTCCTT
rJMFF043I18+ CCTT
                      ____________________________________________________________
consensus GGAAACAAGTGCGATTTGGAGAGCATTCGGGATGTGAGCGTGGAAGAGGGCAAGCTCCTT
 
. : . : . : . : . : . :
JMFF043I18- GCAGAAGAGGAAGGGTTGTTCTTCATAGAGACGTCCGCCCTCGACTCCACCAACGTCAAC
rJMSF013D04+ GCAGAAGAGGAAGGGTTGTTCTTCATAGAGACGTCCGCCCTCGACTCCACCAACGTCAAC
rJMFF043I18+ GCAGAAGAGGAAGGGTTGTTCTTCATAGAGACGTCCGCCCTCGACTCCACCAACGTCAAC
                      ____________________________________________________________
consensus GCAGAAGAGGAAGGGTTGTTCTTCATAGAGACGTCCGCCCTCGACTCCACCAACGTCAAC
 
. : . : . : . : . : . :
JMFF043I18- ACCGCC-TTGAGATTGTCATTCGCGACATCTACAAGAACGTTAGCAGGAAGCTGCTNCAC
rJMSF013D04+ ACCGCCTTTGAGATTGTCATTCGCGACATCTACAAGAACGTTAGCAGGAAGCTGCTCAAC
rJMSF006E17+ TTGAGATTGTCATTCGCGACATCTACAAGAACGTTAGCAGGAAGCTGCTCAAC
rJMFF043I18+ ACCGCC-TTGAGATTGTCATTCGCGACATTTACAAGAACGTTAGCAGGAAGCTGCTCAAC
                      ____________________________________________________________
consensus ACCGCC-TTGAGATTGTCATTCGCGACATCTACAAGAACGTTAGCAGGAAGCTGCTCAAC
 
. : . : . : . : . : . :
JMFF043I18- TCCGACTCCTACAAGGCCGAGCTGTCTGTAAACCGGGTT
rJMSF013D04+ TCCGACTCCTACAAGGCCGAGCTGTCTGTAAACCGGGTTAGCCTCGCGAATGGAGCTGAC
rJMSF006E17+ TCCGACTCCTACAAGGCCGAGCTGTCTGTAAACCGGGTTAGCCTCGCGAATGGAGCTGAC
rJMFF043I18+ TCCGACTCCTACAAGGCCGAGCTGTCTGTAAACCGGGTTAGCCTCGCGAATGGAGCTGAC
                      ____________________________________________________________
consensus TCCGACTCCTACAAGGCCGAGCTGTCTGTAAACCGGGTTAGCCTCGCGAATGGAGCTGAC
 
. : . : . : . : . : . :
rJMSF013D04+ ATGTCGAAGCAAAACAAGAGCAGCTACGCGTGCTGCTCCTCCTCCTCCTAGTAATTTTGT
rJMSF006E17+ ATGTCGAAGCAAAACAAGAGCAGCTACGCGTGCTGCTCCTCCTCCTCCTAGTAATTTTGT
rJMFF043I18+ ATGTCGAAGCAAAACAAGAGCAGCTACGCGTGCTGCTCCTCCTCCTCCTAGTAATTTTGT
                      ____________________________________________________________
consensus ATGTCGAAGCAAAACAAGAGCAGCTACGCGTGCTGCTCCTCCTCCTCCTAGTAATTTTGT
 
. : . : . : . : . : . :
rJMSF013D04+ TTTGTTTTCCCACGTTGTTTTAGCTGTATGTTAGACTTTTGGATGTATGTTTATTCTTTT
rJMSF006E17+ TTTGTTTTCCCACGTTGTTTTAGCTGTATGTTAGACTTTTGGATGTATGTTTATTCTTTT
rJMFF043I18+ TTTGTTTTCCCACGTTGTTTTAGCTGTATGTTAGACTTTTGGATGTATGTTTATTCTTTT
                      ____________________________________________________________
consensus TTTGTTTTCCCACGTTGTTTTAGCTGTATGTTAGACTTTTGGATGTATGTTTATTCTTTT
 
. : . : . : . : . : . :
rJMSF006E17+ TGATGAATTAGGGCAATGAGGGTCTCTGAGGTTGCCTTATGGAATGGCATATNTATTGTA
rJMFF043I18+ TGATGAATTAGGGCAATGAGGGTCTCTGAGGTTGCCTTATGGAATGGCATATTTATTGTA
                      ____________________________________________________________
consensus TGATGAATTAGGGCAATGAGGGTCTCTGAGGTTGCCTTATGGAATGGCATATTTATTGTA
 
. : . : . : . : . : . :
rJMSF006E17+ TGTTTCTTGGTCAGGCCAGTGAAGTTTCAAAGATGCAGCAGAACAAGTTAACATG
rJMFF043I18+ TGTTTCTTGGTCAGGCCAGTGAAGTTTCAAAGATGCAGCAGAACAAGTTAACATGCACTC
                      ____________________________________________________________
consensus TGTTTCTTGGTCAGGCCAGTGAAGTTTCAAAGATGCAGCAGAACAAGTTAACATGCACTC
 
. : . : . : . : . : . :
rJMFF043I18+ TGCAGTGTTCTTGTTTATTTGGAGTTGGTATGTGAATTTCTTGGTGATATTGTCCGCTCT
                      ____________________________________________________________
consensus TGCAGTGTTCTTGTTTATTTGGAGTTGGTATGTGAATTTCTTGGTGATATTGTCCGCTCT