| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026H17 | Sequence | 519 | 007392 (5) | ref|XP_009777394.1| | 2e-61 | PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris] | 704 | 006936 (7) | ref|XP_006355077.1| | 1e-52 | PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum |
| JMFF043F23 | Sequence | 634 | 007392 (5) | ref|XP_006355077.1| | 2e-114 | PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum | 588 | 006936 (7) | ref|XP_006355077.1| | 3e-37 | PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum |
| JMFS059A03 | Sequence | 160 | 006936 (7) | ||||||||
| JMSF018O22 | Sequence | 302 | 007392 (5) | gb|EPS74138.1| | 3e-45 | hypothetical protein M569_00617, partial [Genlisea aurea] | 764 | 006936 (7) | ref|XP_006355077.1| | 3e-71 | PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum |
| JMSF023O22 | Sequence | 689 | 007392 (5) | ref|XP_009777394.1| | 6e-126 | PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris] | 768 | 006936 (7) | ref|XP_006355077.1| | 2e-57 | PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum |
| JMSF025M23 | Sequence | 670 | 006936 (7) | ref|XP_009777394.1| | 2e-52 | PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana sylvestris] | |||||
| JMSF041C06 | Sequence | 789 | 007392 (5) | ref|XP_009627948.1| | 2e-166 | PREDICTED: putative clathrin assembly protein At2g01600 [Nicotiana tomentosifor | 747 | 006936 (7) | ref|XP_006355077.1| | 7e-55 | PREDICTED: putative clathrin assembly protein At2g01600-like [Solanum tuberosum |
This contig is upended
. : . : . : . : . : . :
rJMSF018O22+ ACCCCCGCCACCACCACAACC
rJMSF023O22+ ACC
____________________________________________________________
consensus ACCCCCGCCACCACCACAACC
. : . : . : . : . : . :
rJMSF018O22+ AGCAGAGGATGTTGCAGTTTCAACCACCGAGATTCCTGCCCCCGTGCCTCCTGTCAAATT
rJMSF023O22+ AGCAGAGGATGTTGCAGTTTCAACCACCGAGATTCCTGCCCCCGTGCCTCCTGTCAAATT
____________________________________________________________
consensus AGCAGAGGATGTTGCAGTTTCAACCACCGAGATTCCTGCCCCCGTGCCTCCTGTCAAATT
. : . : . : . : . : . :
rJMSF018O22+ TGAAACCGATGATCTACTTGGGTTAAATGCTCCCACGTCAGATGTGTCTGCGATTGAGGA
rJMSF023O22+ TGAAACCGATGATCTACTTGGGTTAAATGCTCCCACGTCAGATGTGTCTGCGATTGAGGA
rJMFF026H17+ GTCAGATGTGTCTGCGATTGAGGA
rJMSF025M23+ TCAGATGTGTCTGCGATTGAGGA
rJMSF041C06+ GGTTAAATGCTCCCACGTCAGATGTGTCTGCGANTGAGGA
____________________________________________________________
consensus TGAAACCGATGATCTACTTGGGTTAAATGCTCCCACGTCAGATGTGTCTGCGATTGAGGA
. : . : . : . : . : . :
rJMSF018O22+ AAGCAACGCGTTGGCTTTGGCTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMSF023O22+ AAGCAA--CGTTGGCTTTGGCTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMFF026H17+ AAGCAACGCGTTGGCTTTGGCTATAGTTTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMSF025M23+ AAGCAACGCGTTGGCTTTGGNTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
rJMSF041C06+ AAGCAACGCGTTGGCTTTGGCTATAG-TTCCATCTNGGGCAACATCCGAAACTGTACAGC
____________________________________________________________
consensus AAGCAACGCGTTGGCTTTGGCTATAG-TTCCATCTGGGGCAACATCCGAAACTGTACAGC
. : . : . : . : . : . :
rJMSF018O22+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
rJMSF023O22+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
rJMFF026H17+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
rJMSF025M23+ CCAAAGANTTCGATCGTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCANCAANT
rJMSF041C06+ CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
____________________________________________________________
consensus CCAAAGACTTCGATCCTACAGGATGGGAACTCGCCCTAGTCAGTACTCCCGGCACCAACT
. : . : . : . : . : . :
rJMSF018O22+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMSF023O22+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMFF026H17+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMSF025M23+ TGTCAACACCTCAGGAGCGGCAATTGNCTGGTGGATTGGATTCGCTCACTNTTAACAGTT
rJMSF041C06+ TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
rJMFF043F23+ AGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
____________________________________________________________
consensus TGTCAACACCTCAGGAGCGGCAATTGGCTGGTGGATTGGATTCGCTCACTCTTAACAGTT
. : . : . : . : . : . :
rJMSF018O22+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMSF023O22+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMFF026H17+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMSF025M23+ TATACGACGAGGGCGCNTNCAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMSF041C06+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
rJMFF043F23+ TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
____________________________________________________________
consensus TATACGACGAGGGCGCCTACAGAGCATCACAGCAACCAGTATACGGAGCGCCAGCCCCCA
. : . : . : . : . : . :
rJMSF018O22+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMSF023O22+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMFF026H17+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMSF025M23+ ACCCGTTTGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMSF041C06+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
rJMFF043F23+ ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
____________________________________________________________
consensus ACCCGTTCGAAGTAGCTGATCCATTTGCCATGTCTAACGCCATTGCTGCACCTCCATCAG
. : . : . : . : . : . :
rJMSF018O22+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMSF023O22+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMFF026H17+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMSF025M23+ TCCAACTCGCTCCAATGCCTCANCCAAANCCCTTCGGTCCATTCCATCCGGCTGNTGCTG
rJMSF041C06+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
rJMFF043F23+ TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
____________________________________________________________
consensus TCCAACTCGCTCCAATGCCTCAACCAAACCCCTTCGGTCCATTCCATCCGGCTGCTGCTG
. : . : . : . : . : . :
rJMSF018O22+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMSF023O22+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMFF026H17+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMSF025M23+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACNATCCTTTNGGNGACACGGGNT
rJMSF041C06+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
rJMFF043F23+ CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
____________________________________________________________
consensus CATACCCACCTCAGAATCCATTGATGGTCGGGCCCCACAATCCTTTTGGCGACACGGGGT
. : . : . : . : . : . :
rJMSF018O22+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMSF023O22+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMFF026H17+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMSF025M23+ TNGGGGCATTCCCCGCAAATAATGGTGATGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMSF041C06+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
rJMFF043F23+ TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
____________________________________________________________
consensus TCGGGGCATTCCCCGCAAATAATGGTGCTGCTGCGGGGGCGCACCAACAAAATACCAACC
. : . : . : . : . : . :
rJMSF018O22+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMSF023O22+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMFF026H17+ CGTTTGGGGGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMSF025M23+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
rJMSF041C06+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
JMFS059A03+ GGGATTTCGGTATAGATGATTTTGGG
rJMFF043F23+ CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
____________________________________________________________
consensus CGTTTGGGAGCCTGCTGTAGGAAGAAATGTAGGCGGGATTTCGGCATAGATGATTTTGGG
. : . : . : . : . : . :
rJMSF018O22+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMSF023O22+ GTGACAATATGAGTGTAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMFF026H17+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMSF025M23+ GTGACAATATGAGTGCAGGCCATGGTTTGANGATGATATGTAGATNGGTTTTTTCATTGA
rJMSF041C06+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
JMFS059A03+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
rJMFF043F23+ GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
____________________________________________________________
consensus GTGACAATATGAGTGCAGGCCATGGTTTGATGATGATATGTAGATTGGTTTTTTCATTGA
. : . : . : . : . : . :
rJMSF018O22+ ACAAATGCATGCATGCATTGAGAT
rJMSF023O22+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATT
rJMFF026H17+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
rJMSF025M23+ ACAAATGCANGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATT
rJMSF041C06+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
JMFS059A03+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
rJMFF043F23+ ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
____________________________________________________________
consensus ACAAATGCATGCATGCATTGAGATGTAAAATTCATAAAGAAGAAGATTTGATTGCAGTGC
. : . : . : . : . : . :
rJMFF026H17+ GGTATTGTGTT
rJMSF041C06+ GGTATTGTGTTATCAAAACTTCATGGTTTGCAAAC
JMFS059A03+ GGTATTGTGTT
rJMFF043F23+ GGTATTGTGTTATCAAAACTTCATGGTTTGCAAACTTCATAGTCATTTTTTATTTGAAAG
____________________________________________________________
consensus GGTATTGTGTTATCAAAACTTCATGGTTTGCAAACTTCATAGTCATTTTTTATTTGAAAG