Contig 006934:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034E05Sequence451003260 (8)769006934 (2)gb|ADE77861.1|6e-82unknown [Picea sitchensis]
JMFF042J09Sequence644003260 (8)520006934 (2)gb|ADE77861.1|3e-15unknown [Picea sitchensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF034E05+ TTGCAG
                      ____________________________________________________________
consensus TTGCAG
 
. : . : . : . : . : . :
rJMFF034E05+ CAGTCTTACAAAGTGAGTGAATCTTTTCCGTTTAAATGGATAAACAAGAAGTGGAGAGAG
                      ____________________________________________________________
consensus CAGTCTTACAAAGTGAGTGAATCTTTTCCGTTTAAATGGATAAACAAGAAGTGGAGAGAG
 
. : . : . : . : . : . :
rJMFF034E05+ GGCTTCTATGTTACCTCGATGGCCACTGCTGGCAGTAGATGGGCTGTAGTCATGTCTCGT
                      ____________________________________________________________
consensus GGCTTCTATGTTACCTCGATGGCCACTGCTGGCAGTAGATGGGCTGTAGTCATGTCTCGT
 
. : . : . : . : . : . :
rJMFF034E05+ GGTGCTGGAATTTCAGAACAGGTCGTCGAATTGGATTTTCTTTACCCTAGTGAAGGTATC
                      ____________________________________________________________
consensus GGTGCTGGAATTTCAGAACAGGTCGTCGAATTGGATTTTCTTTACCCTAGTGAAGGTATC
 
. : . : . : . : . : . :
rJMFF034E05+ CACAAGAGATGGGATGGCGGATACCGTATTACTGCTACTGCTGCAACGTGGGATCAGGCC
                      ____________________________________________________________
consensus CACAAGAGATGGGATGGCGGATACCGTATTACTGCTACTGCTGCAACGTGGGATCAGGCC
 
. : . : . : . : . : . :
rJMFF034E05+ GCTTTCGTTCTAAGTGTTCCTAGACGAAAGCCATCCGATGAAACACAGGAGACACTTAGG
rJMFF042J09+ TAGACGAAAGCCATCCGATGAAACACAGGAGACAGTTAGG
                      ____________________________________________________________
consensus GCTTTCGTTCTAAGTGTTCCTAGACGAAAGCCATCCGATGAAACACAGGAGACAGTTAGG
 
. : . : . : . : . : . :
rJMFF034E05+ ACTTCTGCCTTCCCTAGCACTCATGTTAAGGAGAAATGGGCTAAAAATCTATACATAGCA
rJMFF042J09+ ACTTCTGCCTTCCGTAGCACTCATGTTAAGGAGAAATGGGCTAAAAATCTATGCATAGCA
                      ____________________________________________________________
consensus ACTTCTGCCTTCCGTAGCACTCATGTTAAGGAGAAATGGGCTAAAAATCTATGCATAGCA
 
. : . : . : . : . : . :
rJMFF034E05+ TCTGTTTGTTACGGGCGTACAGTGTCATAGAAGTGCCATCATCAAGGTTAGATCTCCCGT
rJMFF042J09+ TCTGTTTGTTACGGGCGTGCAGTGTCATAGAAGTGCCATCATCAAGGTTAGATCTCCCGT
                      ____________________________________________________________
consensus TCTGTTTGTTACGGGCGTGCAGTGTCATAGAAGTGCCATCATCAAGGTTAGATCTCCCGT
 
. : . : . : . : . : . :
rJMFF034E05+ CGATGACTACCCAAAACCTGGACCGTAGTGGAAAATGAAGATAATAAAAGTCGCGTCTGG
rJMFF042J09+ CGATGACTACCCAAAACCTGGACCGTAGGGGAAAATGAAGATAATAAAAGTCGCGTCTGG
                      ____________________________________________________________
consensus CGATGACTACCCAAAACCTGGACCGTAGTGGAAAATGAAGATAATAAAAGTCGCGTCTGG
 
. : . : . : . : . : . :
rJMFF034E05+ GTAGAGAAATTTTGATTTGGAACGAACTTATAGTCATAGCTGCACTTGGTACCGTGTTTA
rJMFF042J09+ GTAGAGAAATTTTGATTTGGAACGATCTTATAGTTATAGATGCACTTGGTGCCGTGTTTA
                      ____________________________________________________________
consensus GTAGAGAAATTTTGATTTGGAACGATCTTATAGTTATAGCTGCACTTGGTGCCGTGTTTA
 
. : . : . : . : . : . :
rJMFF034E05+ GTGGGGGTGGGGGTGGGGGGGTTATTGTGTTGTATGTAATGTGGATGGATGTGCATAGTG
rJMFF042J09+ GTGGGGGTGGGGGTGGGGGGGTTATTGTGTTGTATGTAATGTGGATGGATGTGCATAGTG
                      ____________________________________________________________
consensus GTGGGGGTGGGGGTGGGGGGGTTATTGTGTTGTATGTAATGTGGATGGATGTGCATAGTG
 
. : . : . : . : . : . :
rJMFF034E05+ TGTTCTTACTTCTGTTAGCATAAATGGCGGCTGTAGTAACACATTTCTGCCATCAGATTC
rJMFF042J09+ TGTTCTTACTTCTGTTAGCATAAATGGCGGCTGTAGTAACACATTTCTGCCATCAGATTC
                      ____________________________________________________________
consensus TGTTCTTACTTCTGTTAGCATAAATGGCGGCTGTAGTAACACATTTCTGCCATCAGATTC
 
. : . : . : . : . : . :
rJMFF034E05+ ATGTAATGTTTCTTCGCAGTTAAGGGCCATATCCATATTGGTTAGAGACGTTGTCTAATT
rJMFF042J09+ ATGTAATGTTTCTTCGCAGTTAAGGGCCATATCCATATTGGTTAGTGTCGTTGTCTAAAT
                      ____________________________________________________________
consensus ATGTAATGTTTCTTCGCAGTTAAGGGCCATATCCATATTGGTTAGTGTCGTTGTCTAATT
 
. : . : . : . : . : . :
rJMFF034E05+ ATACATTATTAACTTGCATCTTACTTTGGAATCCCTACATA
rJMFF042J09+ ATACATTATTAACTAGCATATTACTTAGGAATCCATACATAATAAAGCAAAGTTCCATAT
                      ____________________________________________________________
consensus ATACATTATTAACTTGCATCTTACTTTGGAATCCCTACATAATAAAGCAAAGTTCCATAT