| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF010B08 | Sequence | 619 | 000047 (6) | ref|XP_009792343.1| | 9e-41 | PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic | 700 | 006931 (6) | ref|XP_009607989.1| | 6e-37 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMFF017O21 | Sequence | 472 | 000047 (6) | ref|XP_009607989.1| | 3e-33 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub | 776 | 006931 (6) | ref|XP_009607989.1| | 7e-52 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMFF024M10 | Sequence | 461 | 000047 (6) | ref|XP_009607989.1| | 1e-31 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub | 791 | 006931 (6) | ref|XP_009607989.1| | 5e-55 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMFF035E08 | Sequence | 595 | 000047 (6) | ref|XP_009792343.1| | 2e-52 | PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic | 729 | 006931 (6) | ref|XP_009607989.1| | 1e-49 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMFF039C11 | Sequence | 556 | 000047 (6) | ref|XP_009792343.1| | 7e-36 | PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic | 787 | 006931 (6) | ref|XP_009607989.1| | 2e-53 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
| JMFF042D12 | Sequence | 631 | 000047 (6) | ref|XP_009792343.1| | 2e-55 | PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Nic | 651 | 006931 (6) | ref|XP_004290705.1| | 3e-26 | PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat sub |
This contig is upended
. : . : . : . : . : . :
rJMFF024M10+ GGCCAGATTCCGGGCGGTGGAGATCCTGGTGAA
rJMFF039C11+ CCTGGTGAA
rJMFF017O21+ TGGTGAA
____________________________________________________________
consensus GGCCAGATTCCGGGCGGTGGAGATCCTGGTGAA
. : . : . : . : . : . :
rJMFF024M10+ TAGCTCCAAGCTAGCGAAGAATCTTTTAACCAAAGACGGGAAGACCCCGTTTGATGTTTC
rJMFF039C11+ TAGCTCCAAGCTAGCGAAGAATCTTTTAACCAAAGACGGGAAGACCCCGTTTGATGTTTC
rJMFF035E08+ AAGACCCCGTTTGATGTTTC
rJMFF017O21+ TAGCTCCAAGCTAGCGAAGAATC-TTTAACCAAAGACGGGAAGACCCCGTTTGATGTTTC
____________________________________________________________
consensus TAGCTCCAAGCTAGCGAAGAATCTTTTAACCAAAGACGGGAAGACCCCGTTTGATGTTTC
. : . : . : . : . : . :
rJMFF024M10+ CGTGGAAAGGGGACACTCCGATCTGTACGATATGTTGCGGCTGGGAGATGCGTTGCACCG
rJMFF039C11+ CGTGGAAAGGGGACACTCCGATCTGTACGATATGTTGCGGCTGGGAGATGCGTTGCACCG
rJMFF035E08+ CGTGGAAAGGGGACACTCCGATCTGTACGATATGTTGCGGCTGGGAGATGCGTTGCACCG
rJMFF017O21+ CGTGGAAAGGGGACACTCCGATCTGTACGATATGTTGCGGCTGGGAGATGCGTTGCACCG
rJMFF010B08+ CTGTACGATATGTTGCGGCTGGGAGATGCGTTGCNCCG
____________________________________________________________
consensus CGTGGAAAGGGGACACTCCGATCTGTACGATATGTTGCGGCTGGGAGATGCGTTGCACCG
. : . : . : . : . : . :
rJMFF024M10+ AGCGGCTAGGACTGGGGACGTGGGGGGTCTGAGCAAATGCTTGGCGGAGGGGGCTAACGT
rJMFF039C11+ AGCGGCTAGGACTGGGGACGTGGGGGGTCTGAGCAAATGCTTGGCGGAGGGGGCTAACGT
rJMFF035E08+ AGCGGCTAGGACTGGGGACGTGGGGGGTCTGAGCAAATGCTTGGCGGAGGGGGCTAACGT
rJMFF017O21+ AGCGGCTAGGACTGGGGACGTGGGGGGTCTGAGCAAATGCTTGGCGGAGGGGGCTAACGT
rJMFF010B08+ AGCGGCTAGGACTGGGGACGTGGGGGGTCTGAGCAAATGCTTGGCGGAGGGGGCTAACGT
____________________________________________________________
consensus AGCGGCTAGGACTGGGGACGTGGGGGGTCTGAGCAAATGCTTGGCGGAGGGGGCTAACGT
. : . : . : . : . : . :
rJMFF024M10+ GAACGGGAGGGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
rJMFF039C11+ GAACGGGAGGGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
rJMFF035E08+ GAACGGGAGGGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
rJMFF017O21+ GAACGGGAGGGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
rJMFF010B08+ GAACGGGAGGGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
rJMFF042D12+ GGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
____________________________________________________________
consensus GAACGGGAGGGATCAGAACGGGTGGACTCCCCTGCACAGGGCGGCTTTCAAGGGCCGGCT
. : . : . : . : . : . :
rJMFF024M10+ CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
rJMFF039C11+ CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
rJMFF035E08+ CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
rJMFF017O21+ CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
rJMFF010B08+ CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
rJMFF042D12+ CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
____________________________________________________________
consensus CGAGTGCGTTAAGGTGTTGCTGAAACATGGCGCTAAGGTTGACCCGGTGGATGATTGTGG
. : . : . : . : . : . :
rJMFF024M10+ CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
rJMFF039C11+ CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
rJMFF035E08+ CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
rJMFF017O21+ CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
rJMFF010B08+ CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
rJMFF042D12+ CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
____________________________________________________________
consensus CTACATGCCTTTACATCATGCCATTGAAATGGGACACAGACAGATCGCGTTGTATTTAAT
. : . : . : . : . : . :
rJMFF024M10+ CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
rJMFF039C11+ CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
rJMFF035E08+ CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
rJMFF017O21+ CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
rJMFF010B08+ CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
rJMFF042D12+ CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
____________________________________________________________
consensus CGCTCATGGTGCCAAACCCAATTTCAAGGGACTTAAGCTCGCGGGAACCCATCATTCCCT
. : . : . : . : . : . :
rJMFF024M10+ TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
rJMFF039C11+ TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
rJMFF035E08+ TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
rJMFF017O21+ TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
rJMFF010B08+ TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
rJMFF042D12+ TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
____________________________________________________________
consensus TTCTGTAAATTCTTTCTAGAGACATATAATATGTCAACTGACGTATATGATGGATACCCA
. : . : . : . : . : . :
rJMFF024M10+ GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
rJMFF039C11+ GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
rJMFF035E08+ GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
rJMFF017O21+ GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
rJMFF010B08+ GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
rJMFF042D12+ GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
____________________________________________________________
consensus GTTAGAGCCACCGGTCTGGCAATCGATCAATGGAGGTAGCCAATCGAGTCGAGCCGAGAG
. : . : . : . : . : . :
rJMFF024M10+ CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
rJMFF039C11+ CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
rJMFF035E08+ CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
rJMFF017O21+ CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
rJMFF010B08+ CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
rJMFF042D12+ CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
____________________________________________________________
consensus CAAAGGCCGAGGATATCCAGAAGAATATTCAAGGAATCTTTATCAAATCTCAACCGGTTT
. : . : . : . : . : . :
rJMFF024M10+ TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
rJMFF039C11+ TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
rJMFF035E08+ TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
rJMFF017O21+ TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
rJMFF010B08+ TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
rJMFF042D12+ TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
____________________________________________________________
consensus TCTTTTTTTTCAAATTTAGAAATAAGATCTTGTAATTGAAGAAGTAAATCTAAATTTGAT
. : . : . : . : . : . :
rJMFF024M10+ TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
rJMFF039C11+ TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
rJMFF035E08+ TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
rJMFF017O21+ TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
rJMFF010B08+ TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
rJMFF042D12+ TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
____________________________________________________________
consensus TTAGGGAAGTTTCTTAATCAAAATTTGGATACATTTCCCTTTCCTTTCTTTAATCAATCA
. : . : . : . : . : . :
rJMFF024M10+ AGTATGTATAAATACCCCTTAGGGGTCACAT
rJMFF039C11+ AGTATGTATAAATACCCCTTAGGGGTCACATTGTAAGGATTCGGTTTAT
rJMFF035E08+ AGTATGTATAAATACCCCTTAGGGGTCACATTGTAAGGATTCGGTTTAT
rJMFF017O21+ AGTATGTATAAATACCCCTTAGGGGTCACATTGTAAGGATTCGGTTTAT
rJMFF010B08+ AGTATGTATAAATACCCCTTAGGGGTCACATTGTAAGGATTCGGTTTAT
rJMFF042D12+ AGTATGTATAAATACCCCTTAGGGGTCACATTGTAAGGATTCGGTTTATACTTTCTAACA
____________________________________________________________
consensus AGTATGTATAAATACCCCTTAGGGGTCACATTGTAAGGATTCGGTTTATACTTTCTAACA
. : . : . : . : . : . :
rJMFF042D12+ ATAACATTGTTCTCGTGCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG
____________________________________________________________
consensus ATAACATTGTTCTCGTGCTAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAAGG