Contig 006925:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007F13Sequence540006925 (6)ref|XP_009781542.1|8e-99PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 634006925 (6)ref|XP_004230391.1|8e-70PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMFF041L23Sequence647012997 (14)ref|XP_009784886.1|8e-62PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 622006925 (6)ref|XP_009781542.1|1e-75PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMFF049N03Sequence633012997 (14)ref|XP_009784886.1|8e-58PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 646006925 (6)ref|XP_007023750.1|5e-99Leucine-rich repeat protein kinase family protein isoform 1 [Theobroma cacao] g
JMSF020A02Sequence680012997 (14)ref|XP_009784887.1|5e-53PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 709006925 (6)ref|XP_009781542.1|3e-100PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770
JMSF048C05Sequence692012997 (14)ref|XP_009784886.1|8e-82PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 753006925 (6)ref|XP_009781542.1|5e-115PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770

Alignment

This contig is upended


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rJMFF049N03+                              GCCAAAAGAGAAAAGCTCAAGATGCAGCTAAAAAGAATGA
                      ____________________________________________________________
consensus                                 GCCAAAAGAGAAAAGCTCAAGATGCAGCTAAAAAGAATGA
 
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rJMFF049N03+          TCCTTTCGCATCCTGGGATCGATCCAAAAGCAGTGGCGCTGTCCCCCAACTACAGGGAGC
                      ____________________________________________________________
consensus             TCCTTTCGCATCCTGGGATCGATCCAAAAGCAGTGGCGCTGTCCCCCAACTACAGGGAGC
 
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rJMFF049N03+          AAAGTTTTTCTCGTTGAAGAGCTCGCGAAATGCACAAATAACTTCTCAGAAGCCAATACT
                      ____________________________________________________________
consensus             AAAGTTTTTCTCGTTGAAGAGCTCGCGAAATGCACAAATAACTTCTCAGAAGCCAATACT
 
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rJMFF049N03+          GTTGGATCTGGAGGTTATGGGAAGGTATACAGAGGAATTCTTCCTCATGGACAACTAATT
                      ____________________________________________________________
consensus             GTTGGATCTGGAGGTTATGGGAAGGTATACAGAGGAATTCTTCCTCATGGACAACTAATT
 
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rJMFF049N03+          CCCATCAAAAGATCTCAGCAAGGATCTATGCAGGGCGCTCCCGAGTTCAAATCTGAGATT
                      ____________________________________________________________
consensus             CCCATCAAAAGATCTCAGCAAGGATCTATGCAGGGCGCTCCCGAGTTCAAATCTGAGATT
 
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rJMFF049N03+          GAGCTTCTCTCGAGGGTTCACCACAAGAACGTCGTTGACCTTGTTGGGTTTTGTTTTGAT
                      ____________________________________________________________
consensus             GAGCTTCTCTCGAGGGTTCACCACAAGAACGTCGTTGACCTTGTTGGGTTTTGTTTTGAT
 
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rJMFF049N03+          CAAGGCGAACAGATACTAATCTATGAATTTATACCAAATGGTACACTGAAAGAAAGTCTG
                      ____________________________________________________________
consensus             CAAGGCGAACAGATACTAATCTATGAATTTATACCAAATGGTACACTGAAAGAAAGTCTG
 
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rJMFF049N03+          ACAGGGAAATCTGGAATCAAGTTAGATTGGATGAGGAGACTTAGGATTGCTCTTGGAGCG
JMFF007F13-                                                                   AGCG
rJMSF048C05+                                                                  AGCG
                      ____________________________________________________________
consensus             ACAGGGAAATCTGGAATCAAGTTAGATTGGATGAGGAGACTTAGGATTGCTCTTGGAGCG
 
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rJMFF049N03+          GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
rJMSF020A02+                                                        TCCANCGCGACATC
JMFF007F13-           GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
rJMSF048C05+          GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
                      ____________________________________________________________
consensus             GCCAAAGGGCTGCAGTATCTTCATGACCTTGTAAACCCGCCCATCATCCACCGCGACATC
 
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rJMFF049N03+          AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
rJMSF020A02+          AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
JMFF007F13-           AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
rJMSF048C05+          AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
                      ____________________________________________________________
consensus             AAAACAAATAATATTCTGCTGGATGAACGCTTGAATGCTAAAGTTGCAGATTTCGGTCTC
 
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rJMFF049N03+          TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMSF020A02+          TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
JMFF007F13-           TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMSF048C05+          TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMFF007F13+                       GCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
rJMFF041L23+                                                CACTCAAGTTAAAGGAACTATG
                      ____________________________________________________________
consensus             TCCAAGTCTCTAGGCGAACAAGAGAAGGCTCATGTCACCACTCAAGTTAAAGGAACTATG
 
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rJMFF049N03+          GGGTAC                                                      
rJMSF020A02+          GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
JMFF007F13-           GGGTACTTGGATCCCGAATATTACATGACGAACCAGTCGACAGAGAAGAGCGATGTTTAC
rJMSF048C05+          GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
rJMFF007F13+          GGGTACTTGGATCCCGAATATTACATGACGAACCAGTCGACAGAGAAGAGCGATGTTTAC
rJMFF041L23+          GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
                      ____________________________________________________________
consensus             GGGTACTTGGATCCCGAATATTACATGACGAACCAGTTGACAGAGAAGAGCGATGTTTAC
 
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rJMSF020A02+          AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
JMFF007F13-           AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
rJMSF048C05+          AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
rJMFF007F13+          AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
rJMFF041L23+          AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
                      ____________________________________________________________
consensus             AGCTTCGGGGTGGTGCTTCTGGAGATTATAACCGCAAGGCCGCCTATCGAGAAAGGAAAG
 
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rJMSF020A02+          TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
JMFF007F13-           TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
rJMSF048C05+          TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
rJMFF007F13+          TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
rJMFF041L23+          TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
                      ____________________________________________________________
consensus             TACATTGTTCGGGAAGTGAAGCAAGCAATGGACAAGACTAAAGACATGTACGACCTTCAA
 
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rJMSF020A02+          AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
JMFF007F13-           AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
rJMSF048C05+          AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
rJMFF007F13+          AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
rJMFF041L23+          AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
                      ____________________________________________________________
consensus             AGCATTCTCGACCCGTCCATTGCCTCGAGCGTGACGCCTAGAAGTCTAGAGAAGTTCGTC
 
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rJMSF020A02+          GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
JMFF007F13-           GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
rJMSF048C05+          GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
rJMFF007F13+          GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
rJMFF041L23+          GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
                      ____________________________________________________________
consensus             GATGTAGCCTTGAGGTGTCTCGAAGACGTGGCGGCCCAACGCCCAACAATGCGAGAAGTG
 
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rJMSF020A02+          GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
JMFF007F13-           GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTC    
rJMSF048C05+          GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
rJMFF007F13+          GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
rJMFF041L23+          GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
                      ____________________________________________________________
consensus             GTGAAAGAGATCGAGAGCATCATGGAAATGGTGGGGCTAAACCCTCACGCCGACTCGGCT
 
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rJMSF020A02+          TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
rJMSF048C05+          TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
rJMFF007F13+          TCGACTTCAGAGAGCTATTCGTGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
rJMFF041L23+          TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
                      ____________________________________________________________
consensus             TCGACTTCAGAGAGCTATTCGGGAGTGAGCAAAGGCTCCGAACATCCTTACAGCGACGAA
 
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rJMSF020A02+          AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
rJMSF048C05+          AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
rJMFF007F13+          AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
rJMFF041L23+          AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
                      ____________________________________________________________
consensus             AGCCTCTCGGTCTACACTGGGGTGCTTCCCAAGTGAAGATAAAAACAGTTTTTCGAGTGT
 
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rJMSF020A02+          TTGAACAACTTTTTGTTCTATTGNGACATTTCTATATGTNNGCATTATTTCNTGGAGAAT
rJMSF048C05+          TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
rJMFF007F13+          TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
rJMFF041L23+          TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
                      ____________________________________________________________
consensus             TTGAACAACTTTTTGTTCTATTGTGACATTTCTATATGTTTGCATTATTTCTTGGAGAAT
 
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rJMSF020A02+          GGAGATGGATC                                                 
rJMSF048C05+          GGAGATGGATC                                                 
rJMFF007F13+          GGAGATGGATCAAGTGTATAGTAGCATATATATTAT                        
rJMFF041L23+          GGAGATGGATCAAGTGTATAGTAGCATATATATTATTGAATGGCAAATCTGAATTGACCG
                      ____________________________________________________________
consensus             GGAGATGGATCAAGTGTATAGTAGCATATATATTATTGAATGGCAAATCTGAATTGACCG