Contig 006921:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019E23Sequence552003254 (3)ref|XP_009602498.1|213PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis]713006921 (3)gb|KJB54312.1|6e-82hypothetical protein B456_009G028600 [Gossypium raimondii]
JMFF041G04Sequence631003254 (3)ref|XP_009602498.1|265PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis]615006921 (3)ref|XP_006353504.1|116PREDICTED: uncharacterized protein LOC102579879 [Solanum tuberosum]
JMFF042O01Sequence646003254 (3)ref|XP_009602498.1|278PREDICTED: uncharacterized protein LOC104097612 [Nicotiana tomentosiformis]620006921 (3)ref|XP_006353504.1|116PREDICTED: uncharacterized protein LOC102579879 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF019E23+ GTCGCCGCAG
                      ____________________________________________________________
consensus GTCGCCGCAG
 
. : . : . : . : . : . :
rJMFF019E23+ CTTCAATGATAACTCCGTTCGTTCCATCCTCCCCAGGATCCGACCGCGTTTCCCGATCGA
                      ____________________________________________________________
consensus CTTCAATGATAACTCCGTTCGTTCCATCCTCCCCAGGATCCGACCGCGTTTCCCGATCGA
 
. : . : . : . : . : . :
rJMFF019E23+ ATCCCGGCGCGTGGCTGATCCTCCGGCCGAACGGCGGCTCCGTGAGCAGCTGGAAGCCGT
                      ____________________________________________________________
consensus ATCCCGGCGCGTGGCTGATCCTCCGGCCGAACGGCGGCTCCGTGAGCAGCTGGAAGCCGT
 
. : . : . : . : . : . :
rJMFF019E23+ GGGGGCGGCTGGAAGCGTGGCGGGAGAGAGGGCCGGTGGACGGGCTGGGCTACAAATTCG
                      ____________________________________________________________
consensus GGGGGCGGCTGGAAGCGTGGCGGGAGAGAGGGCCGGTGGACGGGCTGGGCTACAAATTCG
 
. : . : . : . : . : . :
rJMFF019E23+ AGCTGGTTTCGGATTCGGGTTTGAACAACGGAGCGCCCATTGCAGAGGGCNCCATGAACG
                      ____________________________________________________________
consensus AGCTGGTTTCGGATTCGGGTTTGAACAACGGAGCGCCCATTGCAGAGGGCNCCATGAACG
 
. : . : . : . : . : . :
rJMFF019E23+ TGAAGAAAGGCGGGGTTTTNTGCATAGACAACGCGGCGGCGAGGAAACAGTCGCCGGCGA
rJMFF042O01+ AAACAGTCGCCGGCGA
rJMFF041G04+ AAACAGTCGCCGGCGA
                      ____________________________________________________________
consensus TGAAGAAAGGCGGGGTTTTNTGCATAGACAACGCGGCGGCGAGGAAACAGTCGCCGGCGA
 
. : . : . : . : . : . :
rJMFF019E23+ TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
rJMFF042O01+ TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
rJMFF041G04+ TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
                      ____________________________________________________________
consensus TTCGGGGATTTGTGATGAGCTCGAGCGTTGAAGGTGAAGGGAAAAATGGGTGCCCTTGGG
 
. : . : . : . : . : . :
rJMFF019E23+ TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTNTNTTTGTTGCGGTTT
rJMFF042O01+ TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTCTCTTTGTTGCGGTTT
rJMFF041G04+ TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTCTCTTTGTTGCGGTTT
                      ____________________________________________________________
consensus TTCAGGTTGGGGTGAAACACGTGACCTGCATGCCGGATGCGGCTCTCTTTGTTGCGGTTT
 
. : . : . : . : . : . :
rJMFF019E23+ CAGCCGCCATTGATNTTAGCATGGATGCTTGCAAGCTTTTNTCCCAGAAACTCAGGAAGG
rJMFF042O01+ CAGCCGCCATTGATCTTAGCATGGATGCTTGCAAGCTTTTCTCCCAGAAACTCAGGAAGG
rJMFF041G04+ CAGCCGCCATTGATCTTAGCATGGATGCTTGCAAGCTTTTCTCCCAGAAACTCAGGAAGG
                      ____________________________________________________________
consensus CAGCCGCCATTGATCTTAGCATGGATGCTTGCAAGCTTTTCTCCCAGAAACTCAGGAAGG
 
. : . : . : . : . : . :
rJMFF019E23+ AGCTTTGCCATGATCATGACCATCACTACTNTTTNTNTTAAACCTTTATTCATCATNTTC
rJMFF042O01+ AGCTTTGCCATGATCATGACCATCACTACTCTTTCTCTTAAACCTTTATTCATCATCTTC
rJMFF041G04+ AGCTTTGCCATGATCATGACCATCACTACTCTTTCTCTTAAACCTTTATTCATCATCTTC
                      ____________________________________________________________
consensus AGCTTTGCCATGATCATGACCATCACTACTCTTTCTCTTAAACCTTTATTCATCATCTTC
 
. : . : . : . : . : . :
rJMFF019E23+ AAAAAAAATATTTTTGGCCATTGGTNTGAGCATGAAGATGCACAATACAAA-TTTTTTTT
rJMFF042O01+ AAAAAAAATATTTTTGGCCATTGGTCTGAGCATGAAGATGCACAATACAAATTTTTTTTT
rJMFF041G04+ AAAAAAAATATTTTTGGCCATTGGTCTGAGCATGAAGGTGCACAATACAAA-TTTTTTTT
                      ____________________________________________________________
consensus AAAAAAAATATTTTTGGCCATTGGTCTGAGCATGAAGATGCACAATACAAA-TTTTTTTT
 
. : . : . : . : . : . :
rJMFF019E23+ TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
rJMFF042O01+ TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
rJMFF041G04+ TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
                      ____________________________________________________________
consensus TTTAATTGGTTAACCAATCGACCCAAGAGAACCCATTCTTGACATTATATTATCCTTAGG
 
. : . : . : . : . : . :
rJMFF019E23+ GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTT
rJMFF042O01+ GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTTTGAGAAATATTATTTCTTCTTCT
rJMFF041G04+ GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTTTGAGAAATATTATTTCTTCTTCT
                      ____________________________________________________________
consensus GAAGTTATGTTTGTGCGCACAAGAGATCTGTCTACTTTGAGAAATATTATTTCTTCTTCT
 
. : . : . : . : . : . :
rJMFF042O01+ AAATACTGTCTACTGAACTATTGAGCTAAGTTCGTGTGAACGAGTGTGACCTGTATTGAT
rJMFF041G04+ AAATACTGTCTACTGAACTATTGAGCTAAGTTCGTGTGAACGAGTGTGACCTGTATTGAT
                      ____________________________________________________________
consensus AAATACTGTCTACTGAACTATTGAGCTAAGTTCGTGTGAACGAGTGTGACCTGTATTGAT
 
. : . : . : . : . : . :
rJMFF042O01+ CTGATGAGTGAATTTTTTAAAATTTTTTTTTGGGCTTAGCTTCAATGTACCATAAATATG
rJMFF041G04+ CTGATGAGTGAATTTTTTAAAATTTTTTTTTGGGCTTAGCTTCAATGTACCATAAATATG
                      ____________________________________________________________
consensus CTGATGAGTGAATTTTTTAAAATTTTTTTTTGGGCTTAGCTTCAATGTACCATAAATATG
 
. : . : . : . : . : . :
rJMFF042O01+ AAGTTTGTAACAGTTTGTGTGTTACAGATTGATATTGTACAGACAAATTAAACAGTGAGC
rJMFF041G04+ AAGTTTGTAACAGTTTGTGTGTTACAGATTGATATTGTACAGACAAATTAAACAGTGAGC
                      ____________________________________________________________
consensus AAGTTTGTAACAGTTTGTGTGTTACAGATTGATATTGTACAGACAAATTAAACAGTGAGC