Contig 006920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041B02Sequence646006920 (2)ref|XP_004239629.1|1e-124PREDICTED: protein OPI10 homolog [Solanum lycopersicum] ref|XP_010321300.1| PRED610006920 (2)ref|XP_006345750.1|2e-80PREDICTED: protein OPI10 homolog [Solanum tuberosum]

Alignment

This contig is upended


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JMFF041B02- ACCTTCATCACTCATCTTTTTCACCCACCGTGAAG
                      ____________________________________________________________
consensus ACCTTCATCACTCATCTTTTTCACCCACCGTGAAG
 
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JMFF041B02- CAGCTTTTTTCTCCGGCTGAAAATTTGGGAGGAGAATCGAAGAATAAGAAATGTTCGGAG
                      ____________________________________________________________
consensus CAGCTTTTTTCTCCGGCTGAAAATTTGGGAGGAGAATCGAAGAATAAGAAATGTTCGGAG
 
. : . : . : . : . : . :
JMFF041B02- TAGTTTTCCCGAACCGGAGCTTCCCAATGGACATCTCTTCCTTCACTCAAATCGACACCA
                      ____________________________________________________________
consensus TAGTTTTCCCGAACCGGAGCTTCCCAATGGACATCTCTTCCTTCACTCAAATCGACACCA
 
. : . : . : . : . : . :
JMFF041B02- CACATTGGCTCCTCGATATGAACACCTTCGTCGGCGAGGCGTACGATTCAATCCGGGAAG
                      ____________________________________________________________
consensus CACATTGGCTCCTCGATATGAACACCTTCGTCGGCGAGGCGTACGATTCAATCCGGGAAG
 
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JMFF041B02- TGTGCATCTTCCTTCTCAACAACTTCACGCTCCCGCCGGACAAGGCCCTGGCCGTTTACA
rJMFF041B02+ GCCGTTTACA
                      ____________________________________________________________
consensus TGTGCATCTTCCTTCTCAACAACTTCACGCTCCCGCCGGACAAGGCCCTGGCCGTTTACA
 
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JMFF041B02- TCCAATCGCCGGGATCGCCGTTCCTCTTCTGCGGCGCCGTCACGCTAAGCCGCCCCTCCG
rJMFF041B02+ TCCAATCGCCGGGATCGCCGTTCCTCTTCTGCGGCGCCGTCACGATAAGCCGCCCCTCCG
                      ____________________________________________________________
consensus TCCAATCGCCGGGATCGCCGTTCCTCTTCTGCGGCGCCGTCACGCTAAGCCGCCCCTCCG
 
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JMFF041B02- CCGTGCTCTCCCTGCCGTGGCCGGAGCCCGGCGGCGAGCTCCAGCTCACCGCCGACGCCA
rJMFF041B02+ CCGTGCTCTCCCTGCCGTGGCCGGAGCCCGGCGGCGAGCTCCAGCTCACCGCCGACGCCA
                      ____________________________________________________________
consensus CCGTGCTCTCCCTGCCGTGGCCGGAGCCCGGCGGCGAGCTCCAGCTCACCGCCGACGCCA
 
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JMFF041B02- CTCCGCTGTCCGCGAAGATCGGCGTGTCCGTTGAGGAGCTGGCGACGCTGCCGTCCCTGG
rJMFF041B02+ CTCCGCTGTCCGCGAAGATCGGCGTGTCCGTTGAGGAGCTGGCGACGCTGCCGTCCCTGG
                      ____________________________________________________________
consensus CTCCGCTGTCCGCGAAGATCGGCGTGTCCGTTGAGGAGCTGGCGACGCTGCCGTCCCTGG
 
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JMFF041B02- ACGTGGCCGCGGGGAAGAAGATCGAGAGGCTAGCGATGAAAGTGGGGGAGAATTTGTTCA
rJMFF041B02+ ACGTGGCCGCGGGGAAGAAGATCGAGAGGCTAGCGATGAAAGTGGGGGAGAATTTGTTCA
                      ____________________________________________________________
consensus ACGTGGCCGCGGGGAAGAAGATCGAGAGGCTAGCGATGAAAGTGGGGGAGAATTTGTTCA
 
. : . : . : . : . : . :
JMFF041B02- ATTTCATGCAGTCGTTTTGCGGAGTGGACGGGAGCAAGCTGATTGTGCCCATGGACATTT
rJMFF041B02+ ATTTCATGCAGTCGTTTTGCGGAGTGGACGGGAGCAAGCTGATTGTGCCCATGGACATTT
                      ____________________________________________________________
consensus ATTTCATGCAGTCGTTTTGCGGAGTGGACGGGAGCAAGCTGATTGTGCCCATGGACATTT
 
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JMFF041B02- TAGACCGCTGGTTCAAGATATTCCAGGAACGGGCCATACGTGACCCGGAATATCTCAAAG
rJMFF041B02+ TAGACCGCTGGTTCAAGAAATTCCAGGAACGGGCCAAACGTGACCCGGAATATCTCAAAG
                      ____________________________________________________________
consensus TAGACCGCTGGTTCAAGATATTCCAGGAACGGGCCATACGTGACCCGGAATATCTCAAAG
 
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JMFF041B02- GTTTTGCTCTC
rJMFF041B02+ GTTTTGCTCTCTAGTTTCATTCAATTTTCAATTTTCAATTTTGTGTGCGTATATCATATG
                      ____________________________________________________________
consensus GTTTTGCTCTCTAGTTTCATTCAATTTTCAATTTTCAATTTTGTGTGCGTATATCATATG
 
. : . : . : . : . : . :
rJMFF041B02+ TTCAGATTCAGATCCCTTCCTTCCCAATGAAATCTATGTGTTGTGATTTCTGCAAATTCG
                      ____________________________________________________________
consensus TTCAGATTCAGATCCCTTCCTTCCCAATGAAATCTATGTGTTGTGATTTCTGCAAATTCG
 
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rJMFF041B02+ CTCTAAAGAATTGAAATTAGGGTTCTTCTTCTTCGACCTTCAGGGTATGCGCTTTGTAAA
                      ____________________________________________________________
consensus CTCTAAAGAATTGAAATTAGGGTTCTTCTTCTTCGACCTTCAGGGTATGCGCTTTGTAAA
 
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rJMFF041B02+ TTAAACTAACTCTTTTTTATTTTTATTTTTTCCCTTTATTAATTTCTTCTTGCTCGAAAG
                      ____________________________________________________________
consensus TTAAACTAACTCTTTTTTATTTTTATTTTTTCCCTTTATTAATTTCTTCTTGCTCGAAAG