Contig 006920:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041B02Sequence646006920 (2)ref|XP_004239629.1|1e-124PREDICTED: protein OPI10 homolog [Solanum lycopersicum] ref|XP_010321300.1| PRED610006920 (2)ref|XP_006345750.1|2e-80PREDICTED: protein OPI10 homolog [Solanum tuberosum]

Alignment

This contig is upended


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JMFF041B02-                                    ACCTTCATCACTCATCTTTTTCACCCACCGTGAAG
                      ____________________________________________________________
consensus                                      ACCTTCATCACTCATCTTTTTCACCCACCGTGAAG
 
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JMFF041B02-           CAGCTTTTTTCTCCGGCTGAAAATTTGGGAGGAGAATCGAAGAATAAGAAATGTTCGGAG
                      ____________________________________________________________
consensus             CAGCTTTTTTCTCCGGCTGAAAATTTGGGAGGAGAATCGAAGAATAAGAAATGTTCGGAG
 
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JMFF041B02-           TAGTTTTCCCGAACCGGAGCTTCCCAATGGACATCTCTTCCTTCACTCAAATCGACACCA
                      ____________________________________________________________
consensus             TAGTTTTCCCGAACCGGAGCTTCCCAATGGACATCTCTTCCTTCACTCAAATCGACACCA
 
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JMFF041B02-           CACATTGGCTCCTCGATATGAACACCTTCGTCGGCGAGGCGTACGATTCAATCCGGGAAG
                      ____________________________________________________________
consensus             CACATTGGCTCCTCGATATGAACACCTTCGTCGGCGAGGCGTACGATTCAATCCGGGAAG
 
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JMFF041B02-           TGTGCATCTTCCTTCTCAACAACTTCACGCTCCCGCCGGACAAGGCCCTGGCCGTTTACA
rJMFF041B02+                                                            GCCGTTTACA
                      ____________________________________________________________
consensus             TGTGCATCTTCCTTCTCAACAACTTCACGCTCCCGCCGGACAAGGCCCTGGCCGTTTACA
 
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JMFF041B02-           TCCAATCGCCGGGATCGCCGTTCCTCTTCTGCGGCGCCGTCACGCTAAGCCGCCCCTCCG
rJMFF041B02+          TCCAATCGCCGGGATCGCCGTTCCTCTTCTGCGGCGCCGTCACGATAAGCCGCCCCTCCG
                      ____________________________________________________________
consensus             TCCAATCGCCGGGATCGCCGTTCCTCTTCTGCGGCGCCGTCACGCTAAGCCGCCCCTCCG
 
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JMFF041B02-           CCGTGCTCTCCCTGCCGTGGCCGGAGCCCGGCGGCGAGCTCCAGCTCACCGCCGACGCCA
rJMFF041B02+          CCGTGCTCTCCCTGCCGTGGCCGGAGCCCGGCGGCGAGCTCCAGCTCACCGCCGACGCCA
                      ____________________________________________________________
consensus             CCGTGCTCTCCCTGCCGTGGCCGGAGCCCGGCGGCGAGCTCCAGCTCACCGCCGACGCCA
 
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JMFF041B02-           CTCCGCTGTCCGCGAAGATCGGCGTGTCCGTTGAGGAGCTGGCGACGCTGCCGTCCCTGG
rJMFF041B02+          CTCCGCTGTCCGCGAAGATCGGCGTGTCCGTTGAGGAGCTGGCGACGCTGCCGTCCCTGG
                      ____________________________________________________________
consensus             CTCCGCTGTCCGCGAAGATCGGCGTGTCCGTTGAGGAGCTGGCGACGCTGCCGTCCCTGG
 
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JMFF041B02-           ACGTGGCCGCGGGGAAGAAGATCGAGAGGCTAGCGATGAAAGTGGGGGAGAATTTGTTCA
rJMFF041B02+          ACGTGGCCGCGGGGAAGAAGATCGAGAGGCTAGCGATGAAAGTGGGGGAGAATTTGTTCA
                      ____________________________________________________________
consensus             ACGTGGCCGCGGGGAAGAAGATCGAGAGGCTAGCGATGAAAGTGGGGGAGAATTTGTTCA
 
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JMFF041B02-           ATTTCATGCAGTCGTTTTGCGGAGTGGACGGGAGCAAGCTGATTGTGCCCATGGACATTT
rJMFF041B02+          ATTTCATGCAGTCGTTTTGCGGAGTGGACGGGAGCAAGCTGATTGTGCCCATGGACATTT
                      ____________________________________________________________
consensus             ATTTCATGCAGTCGTTTTGCGGAGTGGACGGGAGCAAGCTGATTGTGCCCATGGACATTT
 
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JMFF041B02-           TAGACCGCTGGTTCAAGATATTCCAGGAACGGGCCATACGTGACCCGGAATATCTCAAAG
rJMFF041B02+          TAGACCGCTGGTTCAAGAAATTCCAGGAACGGGCCAAACGTGACCCGGAATATCTCAAAG
                      ____________________________________________________________
consensus             TAGACCGCTGGTTCAAGATATTCCAGGAACGGGCCATACGTGACCCGGAATATCTCAAAG
 
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JMFF041B02-           GTTTTGCTCTC                                                 
rJMFF041B02+          GTTTTGCTCTCTAGTTTCATTCAATTTTCAATTTTCAATTTTGTGTGCGTATATCATATG
                      ____________________________________________________________
consensus             GTTTTGCTCTCTAGTTTCATTCAATTTTCAATTTTCAATTTTGTGTGCGTATATCATATG
 
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rJMFF041B02+          TTCAGATTCAGATCCCTTCCTTCCCAATGAAATCTATGTGTTGTGATTTCTGCAAATTCG
                      ____________________________________________________________
consensus             TTCAGATTCAGATCCCTTCCTTCCCAATGAAATCTATGTGTTGTGATTTCTGCAAATTCG
 
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rJMFF041B02+          CTCTAAAGAATTGAAATTAGGGTTCTTCTTCTTCGACCTTCAGGGTATGCGCTTTGTAAA
                      ____________________________________________________________
consensus             CTCTAAAGAATTGAAATTAGGGTTCTTCTTCTTCGACCTTCAGGGTATGCGCTTTGTAAA
 
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rJMFF041B02+          TTAAACTAACTCTTTTTTATTTTTATTTTTTCCCTTTATTAATTTCTTCTTGCTCGAAAG
                      ____________________________________________________________
consensus             TTAAACTAACTCTTTTTTATTTTTATTTTTTCCCTTTATTAATTTCTTCTTGCTCGAAAG