Contig 006917:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040K09Sequence409006917 (3)ref|XP_010656573.1|6e-28PREDICTED: 60S ribosomal protein L39-3-like [Vitis vinifera]346006917 (3)ref|XP_010656573.1|3e-28PREDICTED: 60S ribosomal protein L39-3-like [Vitis vinifera]
JMFN020G09Sequence370006917 (3)gb|EYU20493.1|8e-28hypothetical protein MIMGU_mgv1a017298mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFF040K09+                      TTTTTTTTTTAGTTTGAAAATTCCATCACTGTAACTTGAAAAAATCCAA
                      ____________________________________________________________
consensus                        TTTTTTTTTTAGTTTGAAAATTCCATCACTGTAACTTGAAAAAATCCAA
 
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JMFF040K09+           AAACTTTAGATCCAATACATGATAATTTCCTAAAACATCAATAAAAATACCAATTCATTT
                      ____________________________________________________________
consensus             AAACTTTAGATCCAATACATGATAATTTCCTAAAACATCAATAAAAATACCAATTCATTT
 
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JMFF040K09+           CCCCACCAGTAAACTAATCCATAAAAGGAGCATTTTTTTCCATTATGGAAGTCTAGGAAT
                      ____________________________________________________________
consensus             CCCCACCAGTAAACTAATCCATAAAAGGAGCATTTTTTTCCATTATGGAAGTCTAGGAAT
 
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JMFN020G09+                       TCCAACTTAAAACCCTAGCTTGGTGCGACGCCAGTGCCTGCGCTTAGC
JMFF040K09+           ACAACATCCACATCCACCTTAAAACCCTAGTTTGGTGCGACGCCAATGCCTGCGCTTAGC
rJMFF040K09-                      TCCACCTTAAAACCCTAGTTTGGTGCGACGCCAATGCCTGCGCTTAGC
                      ____________________________________________________________
consensus             ACAACATCCACATCCACCTTAAAACCCTAGTTTGGTGCGACGCCAATGCCTGCGCTTAGC
 
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JMFN020G09+           ATTGTACCTGATGGTGTTGTCGGTCCTCATGCGAATCCAGTAAGGAATAGGCCTGTTCTG
JMFF040K09+           ATTGTACCTGATGGTGTTGTCGGTCCTCATTCGGATCCAATACGGAATGGGTCGGTTCTG
rJMFF040K09-          ATTGTACCTGATGGTGTTGTCGGTCCTCATTCGGATCCAATACGGAATGGGTCGGTTCTG
                      ____________________________________________________________
consensus             ATTGTACCTGATGGTGTTGTCGGTCCTCATTCGGATCCAATACGGAATGGGTCGGTTCTG
 
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JMFN020G09+           TCTCTGCTTCTTCGCCAGCTTCTTCTTGATCATGAAGGTCTTGTGCGACGGCATTTTC  
JMFF040K09+           CCTCTGCTTCTTCGCCAGCTTCTTCTTGATCATGAAGGTCTTGTGGGACGGCATTTTCAC
rJMFF040K09-          CCTCTGCTTCTTCGCCAGCTTCTTCTTGATCATGAAGGTCTTGTGGGACGGCATTTTCAC
                      ____________________________________________________________
consensus             CCTCTGCTTCTTCGCCAGCTTCTTCTTGATCATGAAGGTCTTGTGGGACGGCATTTTCAC
 
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JMFF040K09+           GGTCGGTGAAGATCGGAACGGTGAGCTGCTGCCTGCTAGCTGAATTCGAAACCCTAAATT
rJMFF040K09-          GGTCGGTGAAGATCGGAACGGTGAGCTGCTGCCTGCTAGCTGAATTCGAAACCCTAAATT
                      ____________________________________________________________
consensus             GGTCGGTGAAGATCGGAACGGTGAGCTGCTGCCTGCTAGCTGAATTCGAAACCCTAAATT