Contig 006913:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J10+                    ATCNTTCCCAAATCCTCNGACTCCACTCCACCCTCCACTCCGCTCACCAC
                      ____________________________________________________________
consensus                       ATCNTTCCCAAATCCTCNGACTCCACTCCACCCTCCACTCCGCTCACCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J10+          CACCTCTCCCTCTTCCTCTCCCAACCGCAAAACAACCCCCCGCCGCCGCAGCACCCGGCC
                      ____________________________________________________________
consensus             CACCTCTCCCTCTTCCTCTCCCAACCGCAAAACAACCCCCCGCCGCCGCAGCACCCGGCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J21+                             CCGTGAGCGGCGGCGAGAACGAAACCGACCCGATGCAGTTG
rJMFF039J10+          GAGAACTCCGTCTCCTCCGCCGTGAGCGGCGGCGAGAACGAAACCGACCCGATGCAGTTG
                      ____________________________________________________________
consensus             GAGAACTCCGTCTCCTCCGCCGTGAGCGGCGGCGAGAACGAAACCGACCCGATGCAGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J21+          GAGGGAGAAGAACATAATTCCAAGGTNNGTGTNGATGNTGTTGAGGAGCGCATGAGGGAT
rJMFF039J10+          GAGGGAGAAGAACATAATTCCAAGGTCTGTGTTGATGCTGTTGAGGAGCGCATGAGGGAT
                      ____________________________________________________________
consensus             GAGGGAGAAGAACATAATTCCAAGGTCTGTGTTGATGCTGTTGAGGAGCGCATGAGGGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J21+          TGTTTCATCCAGAACAAGAGGCCCAAAAGGCCACTCTCANCCGCCGCGGCCGCGGCGGAG
rJMFF039J10+          TGTTTCATCCAGAACAAGAGGCCCAAAAGGCCACTCTCACCCGCCGCGGCCGCGGCGGAG
                      ____________________________________________________________
consensus             TGTTTCATCCAGAACAAGAGGCCCAAAAGGCCACTCTCACCCGCCGCGGCCGCGGCGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J21+          TTGCAACAGAGCTATGAGAGCGAGGTTGCCCGGGATGGTTCCGCGGCGGAGTTCTGATCC
rJMFF039J10+          CTGCAACAGAGCTATGAGAGCGAGGTTGCCCGGGATGGTTCCGCGGCGGAGTT-TGATCC
                      ____________________________________________________________
consensus             TTGCAACAGAGCTATGAGAGCGAGGTTGCCCGGGATGGTTCCGCGGCGGAGTTCTGATCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J21+          TATTGGTACCAAGCTGAGATCNTTAGATCATTATATATCAGTTCCATGCTTAAAGAATGG
rJMFF039J10+          TATTGGTACCAAGCTGAGATCTTTAGATC-TTATATATCAGTTCCATGCTTAAAGAATGG
                      ____________________________________________________________
consensus             TATTGGTACCAAGCTGAGATCTTTAGATCATTATATATCAGTTCCATGCTTAAAGAATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF039J21+          CAACAGAGCAGAGAAATGATAAATCAATCA                              
rJMFF039J10+          CAACAGAGCAGAGAAATGATAAATCAATCATCTCAGAGCTCTTTGTACTGTTTTATGAAT
                      ____________________________________________________________
consensus             CAACAGAGCAGAGAAATGATAAATCAATCATCTCAGAGCTCTTTGTACTGTTTTATGAAT