clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF018E07 | Sequence | 583 | 002289 (6) | sp|O04916.1|ACOC_SOLTU | 1e-124 | RecName: Full=Aconitate hydratase, cytoplasmic; Short=Aconitase; AltName: Full= | 748 | 006912 (6) | ref|XP_011100304.1| | 3e-88 | PREDICTED: aconitate hydratase, cytoplasmic [Sesamum indicum] |
JMFF039C14 | Sequence | 472 | 010521 (28) | dbj|BAG16527.1| | 1e-68 | putative aconitase [Capsicum chinense] | 699 | 006912 (6) | ref|XP_010046453.1| | 4e-76 | PREDICTED: aconitate hydratase, cytoplasmic [Eucalyptus grandis] |
JMFS038D07 | Sequence | 659 | 006912 (6) | ref|XP_011100304.1| | 1e-124 | PREDICTED: aconitate hydratase, cytoplasmic [Sesamum indicum] | |||||
JMSF004I08 | Sequence | 311 | 002289 (6) | gb|AFA36529.1| | 9e-61 | aconitate hydratase 2, partial [Lolium perenne] | 376 | 006912 (6) | ref|XP_004251517.2| | 9e-07 | PREDICTED: aconitate hydratase, cytoplasmic [Solanum lycopersicum] |
JMSF028H15 | Sequence | 665 | 002289 (6) | sp|O04916.1|ACOC_SOLTU | 9e-147 | RecName: Full=Aconitate hydratase, cytoplasmic; Short=Aconitase; AltName: Full= | 783 | 006912 (6) | ref|XP_011100304.1| | 5e-94 | PREDICTED: aconitate hydratase, cytoplasmic [Sesamum indicum] |
JMSF034F05 | Sequence | 699 | 002289 (6) | sp|O04916.1|ACOC_SOLTU | 1e-154 | RecName: Full=Aconitate hydratase, cytoplasmic; Short=Aconitase; AltName: Full= | 736 | 006912 (6) | ref|XP_011100304.1| | 4e-86 | PREDICTED: aconitate hydratase, cytoplasmic [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
JMFS038D07- TGGATCGCA
____________________________________________________________
consensus TGGATCGCA
. : . : . : . : . : . :
JMFS038D07- AGGACTTCAACTCTTATGGCAGTCGGCGTGGCAATGATGAAATTATGGCAAGGGGAACTT
____________________________________________________________
consensus AGGACTTCAACTCTTATGGCAGTCGGCGTGGCAATGATGAAATTATGGCAAGGGGAACTT
. : . : . : . : . : . :
JMFS038D07- TTGCTAATATCCGTCTGGTAAACAAACTGTTAAATGGAGAAGTTGGCCCAAAGACAGTTC
rJMSF028H15+ AAGACAGTTC
____________________________________________________________
consensus TTGCTAATATCCGTCTGGTAAACAAACTGTTAAATGGAGAAGTTGGCCCAAAGACAGTTC
. : . : . : . : . : . :
JMFS038D07- ACATCCCAACAGGAGAAAAACTCTATGTGTTTGATGCTGCAATGAGATACAAGTCTGCTG
rJMSF028H15+ ACATCCCAACAGGAGAAAAACTCTATGTGTTTGATGCTGCAATGAGATACAAGTCTGCTG
rJMSF034F05+ CTCTATGTGTTTGATGCTGCAATGAGATACAAGTCTGCTG
rJMFF018E07+ GGAGAAAAACTCTATGTGTTTGATGCTGCAATGAGATACAAGTCTGCTG
____________________________________________________________
consensus ACATCCCAACAGGAGAAAAACTCTATGTGTTTGATGCTGCAATGAGATACAAGTCTGCTG
. : . : . : . : . : . :
JMFS038D07- GGCAGGATACCGTAATCTTGGCTGGAGCAGAGTATGGAAGTGGAAGCTCCAGAGATTGGG
rJMSF028H15+ GGCAGGATACCGTAATCTTGGCTGGAGCAGAGTATGGAAGTGGAAGCTCCAGAGATTGGG
rJMSF034F05+ GGCAGGATACCGTAATCTTGGCTGGAGCAGAGTATGGAAGTGGAAGCTCCAGAGATTGGG
rJMFF018E07+ GGCAGGATACCGTAATCTTGGCTGGAGCAGAGTATGGAAGTGGAAGCTCCAGAGATTGGG
rJMFF039C14+ CTGGAGCAGAGTATGGAAGTGGAAGCTCCAGAGATTGGG
____________________________________________________________
consensus GGCAGGATACCGTAATCTTGGCTGGAGCAGAGTATGGAAGTGGAAGCTCCAGAGATTGGG
. : . : . : . : . : . :
JMFS038D07- CTGCCAAGGGACCAATGTTGTTGGGAGTAAAAGCAGTAATTGCTAAAAGCTTTGAGAGGA
rJMSF028H15+ CTGCCAAGGGACCAATGTTGTTGGGAGTAAAAGCAGTAATTGCTAAAAGCTTTGAGAGGA
rJMSF034F05+ CTGCCAAGGGACCAATGTTGTTGGGAGTAAAAGCAGTAATTGCTAAAAGCTTTGAGAGGA
rJMFF018E07+ CTGCCAAGGGACCAATGTTGTTGGGAGTAAAAGCAGTAATTGCTAAAAGCTTTGAGAGGA
rJMFF039C14+ CTGCCAAGGGACCAATGTTGTTGGGAGTAAAAGCAGTAATTGCTAAAAGCTTTGAGAGGA
____________________________________________________________
consensus CTGCCAAGGGACCAATGTTGTTGGGAGTAAAAGCAGTAATTGCTAAAAGCTTTGAGAGGA
. : . : . : . : . : . :
JMFS038D07- TACACCGCAGTAACCTGGTTGGAATGGGCATTATTCCTTTATGTTTCAAGGCTGGAGAAG
rJMSF028H15+ TACACCGCAGTAACCTGGTTGGAATGGGCATTATTCCTTTATGTTTCAAGGCTGGAGAAG
rJMSF034F05+ TACACCGCAGTAACCTGGTTGGAATGGGCATTATTCCTTTATGTTTCAAGGCTGGAGAAG
rJMFF018E07+ TACACCGCAGTAACCTGGTTGGAATGGGCATTATTCCTTTATGTTTCAAGGCTGGAGAAG
rJMFF039C14+ TACACCGCAGTAACCTGGTTGGAATGGGCATTATTCCTTTATGTTTCAAGGCTGGAGAAG
____________________________________________________________
consensus TACACCGCAGTAACCTGGTTGGAATGGGCATTATTCCTTTATGTTTCAAGGCTGGAGAAG
. : . : . : . : . : . :
JMFS038D07- ATGCAGACACACTTGGATTAACAGGCCATGAGCGTTACACCATTGATCTCCCCAGCAAAA
rJMSF028H15+ ATGCAGACACACTTGGATTAACAGGCCATGAGCGTTACACCATTGATCTCCCCAGCAAAA
rJMSF034F05+ ATGCAGACACACTTGGATTAACAGGCCATGAGCGTTACACCATTGATCTCCCCAGCAAAA
rJMFF018E07+ ATGCAGACACACTTGGATTAACAGGCCATGAGCGTTACACCATTGATCTCCCCAGCAAAA
rJMFF039C14+ ATGCAGACACACTTGGATTAACAGGCCATGAGCGTTACACCATTGATCTCCCCAGCAAAA
____________________________________________________________
consensus ATGCAGACACACTTGGATTAACAGGCCATGAGCGTTACACCATTGATCTCCCCAGCAAAA
. : . : . : . : . : . :
JMFS038D07- TTAGTGATATTCGCCCTGGACAGGATGTTACTGTTCAAACTGACACAGGAAAATGTTTCA
rJMSF028H15+ TTAGTGATATTCGCCCTGGACAGGATGTTACTGTTCAAACTGACACAGGAAAATGTTTCA
rJMSF034F05+ TTAGTGATATTCGCCCTGGACAGGATGTTACTGTTCAAACTGACACAGGAAAATGTTTCA
rJMFF018E07+ TTAGTGATATTCGCCCTGGACAGGATGTTACTGTTCAAACTGACACAGGAAAATGTTTCA
rJMFF039C14+ TTAGTGATATTCGCCCTGGACAGGATGTTACTGTTCAAACTGACACAGGAAAATGTTTCA
____________________________________________________________
consensus TTAGTGATATTCGCCCTGGACAGGATGTTACTGTTCAAACTGACACAGGAAAATGTTTCA
. : . : . : . : . : . :
JMFS038D07- CATGCACTGCTCGGTTTGATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
rJMSF028H15+ CATGCACTGCTCGGTTTGATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
rJMSF034F05+ CATGCACTGCTCGGTTTGATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
rJMFF018E07+ CATGCACTGCTCGGTTTGATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
rJMSF004I08+ GATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
rJMFF039C14+ CATGCACTGCTCGGTTTGATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
____________________________________________________________
consensus CATGCACTGCTCGGTTTGATACTGAGGTGGAGTTGGCCTATTTCAACCATGGAGGCATTC
. : . : . : . : . : . :
JMFS038D07- TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATTG
rJMSF028H15+ TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATTG
rJMSF034F05+ TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATTG
rJMFF018E07+ TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATTG
rJMSF004I08+ TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATNG
rJMFF039C14+ TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATTG
____________________________________________________________
consensus TTCCATATGTTATTCGCCAATTGACCCAGCAATGAGCAACTGCATTTATTGGTACAATTG
. : . : . : . : . : . :
JMFS038D07- TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAA
rJMSF028H15+ TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAACGGAATAAAT
rJMSF034F05+ TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAACGGAATAAAT
rJMFF018E07+ TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAACGGAATAAAT
rJMSF004I08+ TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAACGGAATAAAT
rJMFF039C14+ TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAACGGAATAAAT
____________________________________________________________
consensus TCAGGCTGGTGGATATTGCAGTTGTAGTGGTGTGCCAGTTTAATTGGGAACGGAATAAAT
. : . : . : . : . : . :
rJMSF028H15+ GGCCATGCAATTGTATTTACACTCTTATTAGAGAGGGTATCTTCCAGTAACATCGGCAGA
rJMSF034F05+ GGCCATGCAATTGTATTTACACTCTTATTAGAGAGGGTATCTTCCAGTAACATCGGCAGA
rJMFF018E07+ GGCCATGCAATTGTATTTACACTCTTATTAGAGAGGGTATCTTCCAGTAACATCGGCAGA
rJMSF004I08+ GGCCATGCAATTGTATTTACACTCTTATTAGAGAGGGTATCTTCCAGTAACATCGGCAGA
rJMFF039C14+ GGCCATGCAATTGTATTTACACTCTTATTAGAGAGGGTATCTTCCAGTAACATCGGCAGA
____________________________________________________________
consensus GGCCATGCAATTGTATTTACACTCTTATTAGAGAGGGTATCTTCCAGTAACATCGGCAGA
. : . : . : . : . : . :
rJMSF028H15+ GTTAAATTGTTGGCAATGAGTAGAGGATGTCATTTTTTCTAATAATCTTGTATTCATATT
rJMSF034F05+ GTTAAATTGTTGGCAATGAGTAGAGGATGTCATTTTTTCTAATAATCTTGTATTCATATT
rJMFF018E07+ GTTAAATTGTTGGCAATGAGTAGAGGATGTCATTTTTTCTAATAATCTTGTATTCATATT
rJMSF004I08+ GTTAAATTGTTGGCAATGAGTAGAGGATGTCATTTTTTCTAATAATCTTGTATTCATATT
rJMFF039C14+ GTTAAATTGTTGGCAATGAGTAGAGGATGTCATTTTTTCTAATAATCTTGTATTCATATT
____________________________________________________________
consensus GTTAAATTGTTGGCAATGAGTAGAGGATGTCATTTTTTCTAATAATCTTGTATTCATATT
. : . : . : . : . : . :
rJMSF028H15+ TCCTTCAGACATGATTCTCTACTGTCTTTAACGCAGCGAAGCTTAACTAGTCTTCAGGGG
rJMSF034F05+ TCCTTCAGACATGATTCTCTACTGTCTTTAACGCAGCGAAGCTTAACTAGTCTTCAGGGG
rJMFF018E07+ TCCTTCAGACATGATTCTCTACTGTCTTTAACGCAGCGAAGCTTAACTAGTCTTCAGGGG
rJMSF004I08+ TCCTTCAGACATGATTCTCTACTGTCTTTAACGCAGCGAAGCTTAACTAGTCTTCAGGGG
rJMFF039C14+ TCCTTCAGACATGATTCTCTACTGTCTTTAACGCAGCGAAGCTTAACTAGTCTTCAGGGG
____________________________________________________________
consensus TCCTTCAGACATGATTCTCTACTGTCTTTAACGCAGCGAAGCTTAACTAGTCTTCAGGGG
. : . : . : . : . : . :
rJMSF028H15+ ATATACATTGATGACATTTTGATATCTCAAACTATG
rJMSF034F05+ ATATACATTGATGACATTTTGATATCTCAAACTATG
rJMFF018E07+ ATATACATTGATGACATTTTGATATCTCAAACTATG
rJMSF004I08+ ATATACATTGATGACATTTTGATATCTCAAACT
rJMFF039C14+ ATATACATTGATGACATTTTGATATCTCAAACTATGCTAGAAACATGAAGTTTATATATT
____________________________________________________________
consensus ATATACATTGATGACATTTTGATATCTCAAACTATGCTAGAAACATGAAGTTTATATATT