Contig 006909:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037P24Sequence158006909 (10)
JMFN033C17Sequence651006909 (10)ref|XP_009616943.1|9e-58PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis
JMFS139A10Sequence449006909 (10)ref|XP_009616943.1|6e-31PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis
JMFS140G10Sequence449006909 (10)ref|XP_009616943.1|6e-31PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis
JMSF006F23Sequence372006909 (10)ref|XP_009616943.1|2e-47PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis363006909 (10)ref|XP_004493991.1|6e-20PREDICTED: membrane magnesium transporter-like [Cicer arietinum]
JMSF037E10Sequence660006909 (10)ref|XP_009616943.1|1e-57PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis464006909 (10)ref|XP_004304455.1|3e-24PREDICTED: membrane magnesium transporter [Fragaria vesca subsp. vesca]
JMSF040G12Sequence633006909 (10)ref|XP_009616943.1|6e-58PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis580006909 (10)ref|XP_009616943.1|3e-58PREDICTED: membrane magnesium transporter isoform X2 [Nicotiana tomentosiformis

Alignment

This contig is upended


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JMFS139A10+                       GCAACACTGGAAGGAATTGAATATCAAGGAGAAACAGTACCAAGATCC
JMFS140G10+                       GCAACACTGGAAGGAATTGAATATCAAGGAGAAACAGTACCAAGATCC
JMSF040G12+            TTTTTTTTTTCGCAACACTGGAAGGAATTGAATATCAAGGAGAAACAGTACCAAGATCC
JMFN033C17+                                GAAGGAATTGAATATCAAGGAGAAACAGTACCAAGATCC
rJMSF037E10-                                                                  ATCC
rJMSF040G12-                                                                AGATCC
JMSF037E10+                                 AAGGAATTGAATATCAAGGAGAAACAGTACCAAGATCC
                      ____________________________________________________________
consensus              TTTTTTTTTTCGCAACACTGGAAGGAATTGAATATCAAGGAGAAACAGTACCAAGATCC
 
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JMFS139A10+           TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
JMFS140G10+           TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
JMSF040G12+           TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
JMFN033C17+           TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
rJMSF037E10-          TCTCCTAGGCAAACATAAAAACATCAANGTATNGGCATAGTTANGGTTAAAGATTANAAG
rJMSF006F23-                                                    A-GGTTAAAGATTAGAAG
rJMSF040G12-          TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
JMSF037E10+           TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
                      ____________________________________________________________
consensus             TCTCCTAGGCAAACATAAAAACATCAATGTATTGGCATAGTAA-GGTTAAAGATTAGAAG
 
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JMFS139A10+           CTGCTCCATTTTGCA-GATCAAC-AAAGAAAATACAACTTTTAATAATACATTTGGGAAT
JMFS140G10+           CTGCTCCATTTTGCA-GATCAAC-AAAGAAAATACAACTTTTAATAATACATTTGGGAAT
JMSF040G12+           CTGCTCCATTTTGCA-GATCAACAAAAGAAAATACAACTTTTAATAATACATTTGGGAAT
JMFN033C17+           CTGCTCCATTTTGCA-GATCAACAAAAGAAAATACAACTTTTAATAATACATTTGGGAAT
rJMSF037E10-          CNGCTCCATTTTGCA-NATCANCAAAAGAAAATACAACTTTTAATAATACNTTTGGGAAT
rJMSF006F23-          CTGCTCCATTTTGCAGGATCAACGAAAGAANATACNACTTTTAATAATACGTTTGGGAAT
rJMSF040G12-          CTGCTCCATTTTGCA-GATCAACAAAAGAAAATACAACTTTTAATAATACATTTGGGAAT
JMSF037E10+           CTGCTCCATTTTGCA-GATCAACAAAAGAAAATACAACTTTTAATAATACATTTGGGAAT
                      ____________________________________________________________
consensus             CTGCTCCATTTTGCA-GATCAACAAAAGAAAATACAACTTTTAATAATACATTTGGGAAT
 
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JMFS139A10+           TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
JMFS140G10+           TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
JMSF040G12+           TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
JMFN033C17+           TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
rJMSF037E10-          TGTCNCGCNCNGTCGC-TAAAATAACNGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
rJMSF006F23-          TGTCACGCNCTGTCGCGTNAANTAACTGCTTTGTAGAGAAAGAAAAAGATTTGCNNGANA
rJMSF040G12-          TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
JMSF037E10+           TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
                      ____________________________________________________________
consensus             TGTCACGCACTGTCGC-TAAAATAACTGCTTTGTAGAGAAAGAAAAAGATTTGCAAGAGA
 
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JMFS139A10+           ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
JMFS140G10+           ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
JMSF040G12+           ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
JMFN033C17+           ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
rJMSF037E10-          ACGCAAAACTCNGGTTCCCCTCGNGTCACTTCAACTTGAAATCAACTTCCANAGGAAACG
rJMSF006F23-          ACGCANAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCNACTTCCNGAGGAAACG
rJMSF040G12-          ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
JMSF037E10+           ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
                      ____________________________________________________________
consensus             ACGCAAAACTCTGGTTCCCCTCGTGTCACTTCAACTTGAAATCAACTTCCAGAGGAAACG
 
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JMFS139A10+           CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
JMFS140G10+           CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
JMSF040G12+           CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
JMFN033C17+           CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
rJMSF037E10-          CTTTCCCTCGGNGATTGAAAATCATGAAGTCCANATNGGCAGGTANAGCANCCNCCCNGT
rJMSF006F23-          CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTANAGCAACCACCCTGT
rJMSF040G12-          CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
JMSF037E10+           CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
JMSF006F23+                            AAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
                      ____________________________________________________________
consensus             CTTTCCCTCGGTGATTGAAAATCATGAAGTCCAGATTGGCAGGTAGAGCAACCACCCTGT
 
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JMFS139A10+           TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
JMFS140G10+           TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
JMSF040G12+           TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
JMFN033C17+           TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
rJMSF037E10-          TCTCTTCGGATNGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGNGCAGCCCATA
rJMSF006F23-          TCTCTTCGGATTGGGGATGTATGGACAAANACTTCCCGGGTACAATAAGTGCACCCCATA
rJMSF040G12-          TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
JMSF037E10+           TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
JMSF006F23+           TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
                      ____________________________________________________________
consensus             TCTCTTCGGATTGGGGATGTATGGACAAAAACTTCCCGGGTACAATAAGTGCAGCCCATA
 
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JMFS139A10+           TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGG              
JMFS140G10+           TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGG              
JMSF040G12+           TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGGGAGGACCAGAGAAC
JMFN033C17+           TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGGGAGGACCAGAGAAC
rJMSF037E10-          TGCNCAAC-ACTAACCCTATTATCAACTCCNTAACCNCNTTGANGGGAGGACCANAGAAC
rJMSF006F23-          TGCNCAACTGCTAACCCTATTATCAACTCCATAACCACNTTGATGG              
rJMSF040G12-          TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGGGAGGACCAGAGAAC
JMSF037E10+           TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGGGAGGACCAGAGAAC
JMSF006F23+           TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGGGAGGACCAGAGAAC
                      ____________________________________________________________
consensus             TGCACAAC-ACTAACCCTATTATCAACTCCATAACCACATTGATGGGAGGACCAGAGAAC
 
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JMSF040G12+           TCTTCCTCAGTGATCTTAAGCAAAGCCCTATACTGGATGGTGGAGTAAGCAGCGTGGGAG
JMFN033C17+           TCTTCCTCAGTGATCTTAAGCAAAGCCCTATACTGGATGGTGGAGTAAGCAGCGTGGGAG
rJMSF037E10-          TCTTCCTCAGNGATCTTAAGCAAAGCCCTATAC                           
rJMSF040G12-          TCTTCCTCAGTGATCTTAAGCAAAGCCCTATACTGGATGGTGGAGTAAGCAGCGTGGGAG
JMSF037E10+           TCTTCCTCAGTGATCTTAAGCAAAGCCCTATACTGGATGGTGGAGTAAGCAGCGTGGGAG
JMSF006F23+           TCTTCCTCAGTGATCTTAAGCAAAGCCCTATACTGGATGGTGGAGTAAGCAGCGTGGGAG
                      ____________________________________________________________
consensus             TCTTCCTCAGTGATCTTAAGCAAAGCCCTATACTGGATGGTGGAGTAAGCAGCGTGGGAG
 
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JMSF040G12+           AGGATCAGAACACCAAAAGTGCCGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
JMFN033C17+           AGGATCAGAACACCAAAAGTGCCGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
rJMSF040G12-          AGGATCAGAACACCAAAAGTGCCGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
JMSF037E10+           AGGATCAGAACACCAAAAGTGCCGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
JMSF006F23+           AGGATCAGAACACCAAAAGTGCCGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
rJMFF037P24-                                CGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
                      ____________________________________________________________
consensus             AGGATCAGAACACCAAAAGTGCCGACGAGAAAGCCGATGCTCATCCCCATTGGTAGCGTC
 
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JMSF040G12+           GGAGAATAGATCGTCGGCCGGCAATAGACAGTTCGAC                       
JMFN033C17+           GGAGAATAGATCGTCGGCCGGCAATAGACAGTTCGACGGCTGAGAAAGATATCCTCTTGA
rJMSF040G12-          GGAGAATAGATCGTCGGCCGGCAATAGACAGTTCGAC                       
JMSF037E10+           GGAGAATAGATCGTCGGCCGGCAATAGACAGTTCGACGGCTGAGAAAGATATCCTCTTGA
JMSF006F23+           GGAGAATAGATCGTCGGCCGGCAATAGACAGTTCGACGGCTGAGAAAGATATCCTCTTGA
rJMFF037P24-          NGAGAATAGATCGTCGGCCGGCAATANACAGTTCGACGGCTGAGAAAGATATCCTCTTGA
                      ____________________________________________________________
consensus             GGAGAATAGATCGTCGGCCGGCAATAGACAGTTCGACGGCTGAGAAAGATATCCTCTTGA
 
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JMFN033C17+           CTCTCTTACACTTGTA                                            
JMSF037E10+           CTCTCTTACACTTGTACTTGTTTA                                    
JMSF006F23+           CTCTCTTACACTTGTACTTGTTTA                                    
rJMFF037P24-          CTCTCTTACACTTGTACTTGTTTACGACTGTCCTCGTGATTATTGTTCTGGATCTCCATT
                      ____________________________________________________________
consensus             CTCTCTTACACTTGTACTTGTTTACGACTGTCCTCGTGATTATTGTTCTGGATCTCCATT