Contig 006903:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037D09Sequence463006903 (2)ref|XP_009783146.1|91.3PREDICTED: uncharacterized protein LOC104231791 [Nicotiana sylvestris]734006903 (2)ref|XP_009800376.1|168PREDICTED: uncharacterized protein LOC104246278 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF037D09-                               GATTCAGATTCCCCATCTCCATCGTCTCTATCTTCTCTTC
                      ____________________________________________________________
consensus                                 GATTCAGATTCCCCATCTCCATCGTCTCTATCTTCTCTTC
 
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JMFF037D09-           TCTTCTCTTCCGCACATGAAGGGAATCGATATATTCTGCGCCTCCCAAGCTGCCACCGCC
                      ____________________________________________________________
consensus             TCTTCTCTTCCGCACATGAAGGGAATCGATATATTCTGCGCCTCCCAAGCTGCCACCGCC
 
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JMFF037D09-           ATCCGCTCTACCATGGAAGAGATAACCGCCGCCGCTTCCTCCTCCGCAATCCAACTCGGC
                      ____________________________________________________________
consensus             ATCCGCTCTACCATGGAAGAGATAACCGCCGCCGCTTCCTCCTCCGCAATCCAACTCGGC
 
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JMFF037D09-           GGCGGAGGCAGAGCCATCGACCGCTTCAACCCTATCATCACGGACTCCAGGCGACGAACC
                      ____________________________________________________________
consensus             GGCGGAGGCAGAGCCATCGACCGCTTCAACCCTATCATCACGGACTCCAGGCGACGAACC
 
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JMFF037D09-           GCTCCGGTCCCAAAACCTCCGGCGCCGAACGCTGGCGGTGTTGGCAAGACAAAGAAGGAT
                      ____________________________________________________________
consensus             GCTCCGGTCCCAAAACCTCCGGCGCCGAACGCTGGCGGTGTTGGCAAGACAAAGAAGGAT
 
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JMFF037D09-           AAGAGCAAGAGTATTAAGAGTAATAATAAGAAGAAGAATCCTCGGAAGCCGGCGGCGGGT
                      ____________________________________________________________
consensus             AAGAGCAAGAGTATTAAGAGTAATAATAAGAAGAAGAATCCTCGGAAGCCGGCGGCGGGT
 
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JMFF037D09-           GAGGAAAGCGGCGGCGCGTGGAGGTGTACTAAACCGGGCGGTTTTATCACGCCGCAGAGC
rJMFF037D09+                                                        TCACGCCGCAGAGC
                      ____________________________________________________________
consensus             GAGGAAAGCGGCGGCGCGTGGAGGTGTACTAAACCGGGCGGTTTTATCACGCCGCAGAGC
 
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JMFF037D09-           TCTTCCAGGTACCTTCTGAATGAGAATGAGGACAATAAAGATTATTT             
rJMFF037D09+          TCTTCCAGGTACCTTCTGAATGAGAATGAGGACAATAAAGATTATTTCCTGGACGTGCTT
                      ____________________________________________________________
consensus             TCTTCCAGGTACCTTCTGAATGAGAATGAGGACAATAAAGATTATTTCCTGGACGTGCTT
 
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rJMFF037D09+          TCGGATTTCGACCCGATTCTGAAGTTGGATGATCCGAATAACCATATCAAAAATCTCCAA
                      ____________________________________________________________
consensus             TCGGATTTCGACCCGATTCTGAAGTTGGATGATCCGAATAACCATATCAAAAATCTCCAA
 
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rJMFF037D09+          CAACTTTCCGATCAATCCGGTTCTTCTCACACTCCACTGCCTCCTCTTCCTTCTTCTTCT
                      ____________________________________________________________
consensus             CAACTTTCCGATCAATCCGGTTCTTCTCACACTCCACTGCCTCCTCTTCCTTCTTCTTCT
 
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rJMFF037D09+          CCCCTGCCTCCCTCTGGCTCCACAGATCAGGTGGTTGTTGTTCTTAGGGTTTCACTCCAT
                      ____________________________________________________________
consensus             CCCCTGCCTCCCTCTGGCTCCACAGATCAGGTGGTTGTTGTTCTTAGGGTTTCACTCCAT
 
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rJMFF037D09+          TGCAGAGGATGTGAGAGAAAGATGAGAAAACACATCTCTAGAATGCAAGGGGTATCATCT
                      ____________________________________________________________
consensus             TGCAGAGGATGTGAGAGAAAGATGAGAAAACACATCTCTAGAATGCAAGGGGTATCATCT
 
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rJMFF037D09+          TTCAACATAGACTTTGCAGCTAAGAAGGTGACAGTGGTGGGGGATGTAACACCATTAGGA
                      ____________________________________________________________
consensus             TTCAACATAGACTTTGCAGCTAAGAAGGTGACAGTGGTGGGGGATGTAACACCATTAGGA
 
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rJMFF037D09+          GTTCTAGCAAGCATATCCAAGGTGAAGAACGCACAACTCTGGTCGCCGGCGGTGGCCGGA
                      ____________________________________________________________
consensus             GTTCTAGCAAGCATATCCAAGGTGAAGAACGCACAACTCTGGTCGCCGGCGGTGGCCGGA
 
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rJMFF037D09+          TCTTCCATTCCGGCGGCGGTTAGCCTGAGCAACTCAAGTTCCAAGACTGCTAAGCCGGCG
                      ____________________________________________________________
consensus             TCTTCCATTCCGGCGGCGGTTAGCCTGAGCAACTCAAGTTCCAAGACTGCTAAGCCGGCG
 
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rJMFF037D09+          GCGGTGGCAACACCAACAACTAATGAAAATATGGAAAATATTTCAAGAAATATTCAGCTG
                      ____________________________________________________________
consensus             GCGGTGGCAACACCAACAACTAATGAAAATATGGAAAATATTTCAAGAAATATTCAGCTG
 
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rJMFF037D09+          ATTTCAATGAATTAGAGTTTTATTGGGCTTTATATTGTTCGGTCTTTGGGTGTAGATGAA
                      ____________________________________________________________
consensus             ATTTCAATGAATTAGAGTTTTATTGGGCTTTATATTGTTCGGTCTTTGGGTGTAGATGAA
 
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rJMFF037D09+          GATATTTTAGTAGGGTGCCATTGTTTGGCTTGGTGGGTGGATTAGGATTTTGTGTTTATT
                      ____________________________________________________________
consensus             GATATTTTAGTAGGGTGCCATTGTTTGGCTTGGTGGGTGGATTAGGATTTTGTGTTTATT
 
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rJMFF037D09+          GGTAGGTTTGAGCATTGAAGGTGAAACTCTTTCAAATGTTTGTATTTAATCAGTTCAAAT
                      ____________________________________________________________
consensus             GGTAGGTTTGAGCATTGAAGGTGAAACTCTTTCAAATGTTTGTATTTAATCAGTTCAAAT