Contig 006898:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP010D12Sequence431006898 (3)ref|XP_011073533.1|4e-12PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 isoform X1 [Sesamum indi
JMCP016E07Sequence305006898 (3)ref|XP_011073533.1|9e-14PREDICTED: putative E3 ubiquitin-protein ligase XBAT34 isoform X1 [Sesamum indi
JMFF035B23Sequence582006898 (3)emb|CDO99242.1|1e-45unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMCP010D12+                        ACAAATATTTATAAGCCACGCACATTTCAAACCCTTTTTCTTAAATT
                      ____________________________________________________________
consensus                          ACAAATATTTATAAGCCACGCACATTTCAAACCCTTTTTCTTAAATT
 
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JMCP010D12+           GGACGATCACTTTTAACAATGATAGTCTAGTGACTTTACACAAGAAATTTACAATCTTCC
rJMFF035B23-                            ATGATAGTCTAGTGACTTTACNCAAGAAATTTACAATCTTCC
                      ____________________________________________________________
consensus             GGACGATCACTTTTAACAATGATAGTCTAGTGACTTTACACAAGAAATTTACAATCTTCC
 
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JMCP010D12+           CTTTCTCTTTCTTATTTATCTATATTCACTTTCTTTTTCCCCTTCAAAATAAAAACAATA
rJMCP016E07+                             CTATATTCACTTTCTTTTTCCCCTTCAAAATAAAAACAATA
rJMFF035B23-          CTTTCTCTTTCTTATTTATCTATATTCACTTTCTTTTTCCCCTTCANAATAAAAACAATA
                      ____________________________________________________________
consensus             CTTTCTCTTTCTTATTTATCTATATTCACTTTCTTTTTCCCCTTCAAAATAAAAACAATA
 
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JMCP010D12+           CCACAATCACATTGAATGACAATTTGCTGCAGTTCTAGTATGATATTACATTGCAATAGT
rJMCP016E07+          CCACAATCACATTGAATGACAATTTGCTGCAGTTCTAGTATGATATTACATTGCAATAGT
rJMFF035B23-          CCACAATCNCATTGAATGACAATTTGCTGCAGTTCTAGTATGATATTACATTGCAATAGT
                      ____________________________________________________________
consensus             CCACAATCACATTGAATGACAATTTGCTGCAGTTCTAGTATGATATTACATTGCAATAGT
 
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JMCP010D12+           ATAAATTTTACCCCGTGAAAGTATACTTCTTAGACCAAAGATAACTCGCAATCGTAGgag
rJMCP016E07+          ATAAATTTTACCCCGTGAAAGTATACTTCTTAGACCAAAGATAACTgGCAATCGTAGCTC
rJMFF035B23-          ATAAATTTTACCCCGTGAAAGTATACTGCTTANACCAAAGATNACTCGCAATCGTAGCTC
                      ____________________________________________________________
consensus             ATAAATTTTACCCCGTGAAAGTATACTTCTTAGACCAAAGATAACTCGCAATCGTAGCTC
 
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JMCP010D12+           TTCCACATATACTTGTTCCATTGCTTCCTCTCGAtAgttTTAAACAGCATATACCCCTAT
rJMCP016E07+          TTCCACATATACTTGTTCCATTGCTTCCTCTCGAAACAATTAAACAGCATATACCCTTAT
rJMFF035B23-          TTCCACATATACTTGTTCCATTGCTTCCTCTCGAAACAATTAAACAGCATATACCCTTAT
                      ____________________________________________________________
consensus             TTCCACATATACTTGTTCCATTGCTTCCTCTCGAAACAATTAAACAGCATATACCCTTAT
 
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JMCP010D12+           CACTTGATCAATCTTGGCACGACAGACGGGGgttCCCCtgTTCTTTGCCTTAATCaCGGC
rJMCP016E07+          CACTTGATCAATCTTGGCACGACAGACGGGGCAACCCCACTTCTTTGCCTTAATCTCGGC
rJMFF035B23-          CACTTGATCAATCTTGGCACGACAGACGGGGCAACCCCACTTCTTTGCCTTAATCTCGGC
                      ____________________________________________________________
consensus             CACTTGATCAATCTTGGCACGACAGACGGGGCAACCCCACTTCTTTGCCTTAATCTCGGC
 
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JMCP010D12+           CAGACAAGACATGCACCCAGCCAT                                    
rJMCP016E07+          CAGACAAGACATGCACCCAGCCAT                                    
rJMFF035B23-          CAGACAAGACATGCACCCAGCCATATGGCCACATGGGATGCAAGCGCCCTCGGCTGGAGC
                      ____________________________________________________________
consensus             CAGACAAGACATGCACCCAGCCATATGGCCACATGGGATGCAAGCGCCCTCGGCTGGAGC
 
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rJMFF035B23-          ATCCAAGCATACGACACATGAANAAGCATCGGATTGATCTTTGTCTTCNTGTGGTTTAGC
                      ____________________________________________________________
consensus             ATCCAAGCATACGACACATGAANAAGCATCGGATTGATCTTTGTCTTCNTGTGGTTTAGC
 
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rJMFF035B23-          AGCAACATTCTCGACGGGTTGTGAAGAAAGATCGACAGGGGTAGCATCAATTGATGGATA
                      ____________________________________________________________
consensus             AGCAACATTCTCGACGGGTTGTGAAGAAAGATCGACAGGGGTAGCATCAATTGATGGATA
 
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rJMFF035B23-          ATGGATGGGACCGNCGTCCATTTCCTCGTCTGNAATGGTGGGAGCTGAAGGGATGGGTGG
                      ____________________________________________________________
consensus             ATGGATGGGACCGNCGTCCATTTCCTCGTCTGNAATGGTGGGAGCTGAAGGGATGGGTGG