Contig 006892:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022J15Sequence504007370 (2)ref|XP_009789508.1|144PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]746006892 (2)ref|XP_009789508.1|332PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]
JMFF032L20Sequence510007370 (2)ref|XP_009789508.1|157PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]728006892 (2)ref|XP_009789508.1|317PREDICTED: uncharacterized protein LOC104237121 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF022J15+                                          TTAGCATTCTGGATCAACATGTACAATG
rJMFF032L20+                                                              GTACAATG
                      ____________________________________________________________
consensus                                             TTAGCATTCTGGATCAACATGTACAATG
 
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rJMFF022J15+          CTTGTATCATGCATGGATTTCTTCAATATGGAGCTCCATCTAGTTCTACGCCAGAAAAAC
rJMFF032L20+          CTTGTATCATGCATGGATTTCTTCAATATGGAGCTCCATCTAGTTCTACGCCAGAAAAAC
                      ____________________________________________________________
consensus             CTTGTATCATGCATGGATTTCTTCAATATGGAGCTCCATCTAGTTCTACGCCAGAAAAAC
 
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rJMFF022J15+          TGGCATCACTTATCAACAAGGCGACATTAAACATCGGAGGTCATACAATAAACGCTCAAG
rJMFF032L20+          TGGCATCACTTATCAACAAGGCGACATTAAACATCGGAGGTCATACAATAAACGCTCAAG
                      ____________________________________________________________
consensus             TGGCATCACTTATCAACAAGGCGACATTAAACATCGGAGGTCATACAATAAACGCTCAAG
 
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rJMFF022J15+          GTATTGAGCATTATATTCTGAGAAAACCACTCGGAAAAGAGGGTAAGCAAGATGAGAAGG
rJMFF032L20+          GTATTGAGCATTATATTCTGAGAAAACCACTCGGAAAAGAGGGTAAGCAAGATGAGAAGG
                      ____________________________________________________________
consensus             GTATTGAGCATTATATTCTGAGAAAACCACTCGGAAAAGAGGGTAAGCAAGATGAGAAGG
 
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rJMFF022J15+          GGAGCACAATTCCTTCACTCTATTGTCTAGGCTCCCTCGATCCAAATATCACATTCGCAT
rJMFF032L20+          GGAGCACAATTCCTTCACTCTATTGTCTAGGCTCCCTCGATCCAAATATCACATTCGCAT
                      ____________________________________________________________
consensus             GGAGCACAATTCCTTCACTCTATTGTCTAGGCTCCCTCGATCCAAATATCACATTCGCAT
 
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rJMFF022J15+          TGTGTTGTGGCACTCGTTCCTCACCCGCTGTGAAAATATACACGGCAGAAGGGGTGTCGG
rJMFF032L20+          TGTGTTGTGGCACTCGTTCCTCACCCGCTGTGAAAATATACACGGCAGAAGGGGTGTCGG
                      ____________________________________________________________
consensus             TGTGTTGTGGCACTCGTTCCTCACCCGCTGTGAAAATATACACGGCAGAAGGGGTGTCGG
 
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rJMFF022J15+          CGGAGCTAGAAAAATCGAAGCTGGAGTATTTACAGGCTTCGATCATCGTGACGAACACGA
rJMFF032L20+          CGGAGCTAGAAAAATCGAAGCTGGAGTATTTACAGGCTTCGATCATCGTGACGAACACGA
                      ____________________________________________________________
consensus             CGGAGCTAGAAAAATCGAAGCTGGAGTATTTACAGGCTTCGATCATCGTGACGAACACGA
 
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rJMFF022J15+          AGAAGATTGCGTTGCCGGAGCTTCTGCTAAGAAACATGCGTGACTTTGCGCAGGACTTGG
rJMFF032L20+          AGAAGATTGCGTTGCCGGAGCTTCTGCTAAGAAACATGCGTGACTTTGCGCAGGACTTGG
                      ____________________________________________________________
consensus             AGAAGATTGCGTTGCCGGAGCTTCTGCTAAGAAACATGCGTGACTTTGCGCAGGACTTGG
 
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rJMFF022J15+          ATTCATTGCTGGATTGGGTTTGCCAGCAGCTACCCACGTCAGGATCTCTCAGAAAATCCA
rJMFF032L20+          ATTCATTGCTGGATTGGGTTTGCCAGCAGCTACCCACGTCAGGATCTCTCAGAAAATCCA
                      ____________________________________________________________
consensus             ATTCATTGCTGGATTGGGTTTGCCAGCAGCTACCCACGTCAGGATCTCTCAGAAAATCCA
 
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rJMFF022J15+          TCGTTGATTGCTTCAGGGGCGTCCATGGCGCCGCCAAATCGTCCGCCATTGTTGAGAAAA
rJMFF032L20+          TCGTTGATTGCTTCAGGGGCGTCCATGGCGCCGCCAAATCGTCCGCCATTGTTGAGAAAA
                      ____________________________________________________________
consensus             TCGTTGATTGCTTCAGGGGCGTCCATGGCGCCGCCAAATCGTCCGCCATTGTTGAGAAAA
 
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rJMFF022J15+          TACCTTATGAATTCGACTTCCAGTATCTTTTATCTGTATGATGAATTACTGATTTTTGCT
rJMFF032L20+          TACCTTATGAATTCGACTTCCAGTATCTTTTATCTGTATGATGAATTACTGATTTTTGCT
                      ____________________________________________________________
consensus             TACCTTATGAATTCGACTTCCAGTATCTTTTATCTGTATGATGAATTACTGATTTTTGCT
 
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rJMFF022J15+          ATAAATCTTAAATATGGTGTACATTATAGATATTGATTGCGTAACAATCATAACAGTTAA
rJMFF032L20+          ATAAATCTTAAATATGGTGTACATTATAGATATTGATTGCGTAACAATCATAACAGTTAA
                      ____________________________________________________________
consensus             ATAAATCTTAAATATGGTGTACATTATAGATATTGATTGCGTAACAATCATAACAGTTAA
 
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rJMFF022J15+          AATTTATGTTTACCATTATTGTCTCGGGAAGTTTTTGACACTTTTGATTTCACGATTA  
rJMFF032L20+          AATTTATGTTTACCATTATTGTCTCGGGAAGTTTTTGACACTTTTGATTTCACGATTATA
                      ____________________________________________________________
consensus             AATTTATGTTTACCATTATTGTCTCGGGAAGTTTTTGACACTTTTGATTTCACGATTATA