Contig 006889:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032H19Sequence468006288 (6)ref|XP_009796259.1|1e-65PREDICTED: cellulose synthase-like protein E6 [Nicotiana sylvestris]654006889 (2)gb|AAZ32787.1|1e-68cellulose synthase-like protein CslE [Nicotiana tabacum]
JMSF002D14Sequence301006288 (6)ref|XP_006344955.1|5e-29PREDICTED: cellulose synthase-like protein E6-like [Solanum tuberosum]753006889 (2)gb|AAZ32787.1|1e-94cellulose synthase-like protein CslE [Nicotiana tabacum]

Alignment

This contig is upended


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rJMSF002D14+ ATTT
                      ____________________________________________________________
consensus ATTT
 
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rJMSF002D14+ AGAAAAATAAAATTGGCTGCTCAAATGGGATACTGCATTTACCTCCTCTGGGCTCCAATC
                      ____________________________________________________________
consensus AGAAAAATAAAATTGGCTGCTCAAATGGGATACTGCATTTACCTCCTCTGGGCTCCAATC
 
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rJMSF002D14+ TCCATTCCTACACTCTGTTATGTCATTCTCCCTTCCCTTTGCTTGCTTCATAACATCTCC
                      ____________________________________________________________
consensus TCCATTCCTACACTCTGTTATGTCATTCTCCCTTCCCTTTGCTTGCTTCATAACATCTCC
 
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rJMSF002D14+ TTATTTCCAAAGGTAACCAGCATTTGGTTCCTGCCTTTTGCATACGTTTATGCAGCCAGG
rJMFF032H19+ CCAAAGGTAACCAGCATTTGGTTCCTGCCTTTTGCATACGTTTATGCAGCCAGG
                      ____________________________________________________________
consensus TTATTTCCAAAGGTAACCAGCATTTGGTTCCTGCCTTTTGCATACGTTTATGCAGCCAGG
 
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rJMSF002D14+ AATGGGTATGGATTAGCAGAAGCGTTGAGTAGCGGGGAGACAGTGAGGTCATGGTGGAAC
rJMFF032H19+ AATGGGTATGGATTAGCAGAAGCGTTGAGTAGCGGGGAGACAGTGAGGTCATGGTGGAAC
                      ____________________________________________________________
consensus AATGGGTATGGATTAGCAGAAGCGTTGAGTAGCGGGGAGACAGTGAGGTCATGGTGGAAC
 
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rJMSF002D14+ CTGCAAAGAATATGGATGATTCGGAGGACGACAACATACTTCTTTGCATTCTTTGATACA
rJMFF032H19+ CTGCAAAGAATATGGATGATTCGGAGGACGACAACATACTTCTTTGCATTCTTTGATACA
                      ____________________________________________________________
consensus CTGCAAAGAATATGGATGATTCGGAGGACGACAACATACTTCTTTGCATTCTTTGATACA
 
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rJMSF002D14+ GTTAGCAGACAATTAGGATTCACAGAAACTGCATTATTCACTCTCACAGGTAAGGTAATG
rJMFF032H19+ GTTAGCAGACAATTAGGATTCACAGAAACTGCATTATTCACTCTCACAGGTAAGGTAATG
                      ____________________________________________________________
consensus GTTAGCAGACAATTAGGATTCACAGAAACTGCATTATTCACTCTCACAGGTAAGGTAATG
 
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rJMSF002D14+ GACAACGATGTTGAGAAGAGATACCAACAGGAAATCATGGAATTCGGGAGCTCATCCCTC
rJMFF032H19+ GACAACGATGTTGAGAAGAGATACCAACAGGAAATCATGGAATTCGGGAGCTCATCCCTC
                      ____________________________________________________________
consensus GACAACGATGTTGAGAAGAGATACCAACAGGAAATCATGGAATTCGGGAGCTCATCCCTC
 
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rJMSF002D14+ ATGTTCACCATTACATCCATGCTAGCATTGCTGAACCTGTTGAGTTTCATCTGGGGAGCC
rJMFF032H19+ ATGTTCACCATTACATCCATGCTAGCATTGCTGAACCTGTTGGGTTTCATCTGGGGAGCC
                      ____________________________________________________________
consensus ATGTTCACCATTACATCCATGCTAGCATTGCTGAACCTGTTGGGTTTCATCTGGGGAGCC
 
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rJMSF002D14+ ATGAAACTGGGCTTGGCCCCGGAATTCCTCCCACAGGTGAGTCTGAGTGGGGTGATAGTG
rJMFF032H19+ ATGAAACTGGGCTTGGCCCCGGAATTCCTCCCACAGGTGAGTCTGAGTGGGGTGATAGTG
                      ____________________________________________________________
consensus ATGAAACTGGGCTTGGCCCCGGAATTCCTCCCACAGGTGAGTCTGAGTGGGGTGATAGTG
 
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rJMSF002D14+ ATGGTGAATATGCCTGTTTATGAAGCTCTTTTCATTCGGAAAGACAGCGGAAGCTTGCCA
rJMFF032H19+ ATGGTGAATATGCCTGTTTATGAAGCTCTTTTCATTCGGAAAGACAGCGGAAGCTTGCCA
                      ____________________________________________________________
consensus ATGGTGAATATGCCTGTTTATGAAGCTCTTTTCATTCGGAAAGACAGCGGAAGCTTGCCA
 
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rJMSF002D14+ TTATCGGTTCTTATAAGGTCTGTGCTCGCGCTATCTGTTGTTTGTTTGATGCCTGTCTTC
rJMFF032H19+ TTATCGGTTCTTATAAGGTCTGTGCTCGCGCTATCTGTTGTTTGTTTGATGCCTGTCTTC
                      ____________________________________________________________
consensus TTATCGGTTCTTATAAGGTCTGTGCTCGCGCTATCTGTTGTTTGTTTGATGCCTGTCTTC
 
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rJMSF002D14+ TTCCCAGGCAACGCAAAATGAATTGTAAGACTGTTTCCTTGAATTTCAACTGTCGAATTG
rJMFF032H19+ TTCCCAGGCAACGCAAAATGAATTGTAAGACTGTTTCCTTGAATTTCAACTGTCGAATTG
                      ____________________________________________________________
consensus TTCCCAGGCAACGCAAAATGAATTGTAAGACTGTTTCCTTGAATTTCAACTGTCGAATTG
 
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rJMSF002D14+ TAGTATTCGAAAGCT
rJMFF032H19+ TAGTATTCGAAAGCTTGAAAAAACACAAATTGCTTTCTAATTGTTTCCCAAGTCTCTACC
                      ____________________________________________________________
consensus TAGTATTCGAAAGCTTGAAAAAACACAAATTGCTTTCTAATTGTTTCCCAAGTCTCTACC