| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019E02 | Sequence | 618 | 006887 (6) | ref|XP_010316748.1| | 4e-04 | PREDICTED: uncharacterized protein LOC101248737 isoform X1 [Solanum lycopersicu | 705 | 006887 (6) | ref|XP_009765273.1| | 6e-49 | PREDICTED: protein piccolo-like isoform X4 [Nicotiana sylvestris] |
| JMFF031E21 | Sequence | 671 | 006887 (6) | 721 | 011801 (2) | ref|XP_009796977.1| | 308 | PREDICTED: gamma-soluble NSF attachment protein [Nicotiana sylvestris] | |||
| JMFF031F23 | Sequence | 618 | 006887 (6) | ref|XP_010316748.1| | 4e-04 | PREDICTED: uncharacterized protein LOC101248737 isoform X1 [Solanum lycopersicu | 708 | 006887 (6) | ref|XP_009765273.1| | 5e-49 | PREDICTED: protein piccolo-like isoform X4 [Nicotiana sylvestris] |
| JMSF052E01 | Sequence | 647 | 006887 (6) | ref|XP_009605279.1| | 2e-13 | PREDICTED: proline-rich receptor-like protein kinase PERK10 [Nicotiana tomentos | 898 | 001509 (5) | ref|XP_009622454.1| | 80.5 | PREDICTED: uncharacterized protein LOC104113850 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFF031E21- ATGTGAGAAATATGGTACGACAAT
____________________________________________________________
consensus ATGTGAGAAATATGGTACGACAAT
. : . : . : . : . : . :
JMFF031E21- GAAATATGCGCTAAAACTGAGAGTTCAATTCAGCGCCAACTGAGAAACACACACAGAGAG
JMFF019E02- AGCGCCAACTGAGAAACACACACAGAGAG
JMFF031F23- AGCGCCAACTGAGAAACACACACAGAGAG
____________________________________________________________
consensus GAAATATGCGCTAAAACTGAGAGTTCAATTCAGCGCCAACTGAGAAACACACACAGAGAG
. : . : . : . : . : . :
JMFF031E21- CAAAGCCGAGATGGGGGCGGAGGAAGGAATGGAGAGCAACCCAAAAACATTCGTAGAAGA
JMFF019E02- CAAAGCCGAGATGGGGGCGGAGGAAGGAATGGAGAGCAACCCAAAAACATTCGTAGAAGA
JMFF031F23- CAAAGCCGAGATGGGGGCGGAGGAAGGAATGGAGAGCAACCCAAAAACATTCGTAGAAGA
____________________________________________________________
consensus CAAAGCCGAGATGGGGGCGGAGGAAGGAATGGAGAGCAACCCAAAAACATTCGTAGAAGA
. : . : . : . : . : . :
JMFF031E21- AGAAGAAGAAGATGAAGATGATGATGAAGGGCCCCC-CCTGGTTTTGATTCGATAGCTAT
JMFF019E02- AGAAGAAGAAGATGAAGATGATGATGAAGGGCCCCCGCCTGGTTTTGATTCGATAGCTAT
JMFF031F23- AGAAGAAGAAGATGAAGATGATGATGAAGGGCCCCCGCCTGGTTTTGATTCGATAGCTAT
____________________________________________________________
consensus AGAAGAAGAAGATGAAGATGATGATGAAGGGCCCCCGCCTGGTTTTGATTCGATAGCTAT
. : . : . : . : . : . :
JMFF031E21- AAGGTCACAACTTGAAAACATGGATGTTGAGGATGAAGATGAAGATGACGATGACGATGA
JMFF019E02- AAGGTCACAACTTGAAAACATGGATGTTGAGGATGAAGATGAAGATGACGATGACGATGA
JMFF031F23- AAGGTCACAACTTGAAAACATGGATGTTGAGGATGAAGATGAAGATGACGATGACGATGA
____________________________________________________________
consensus AAGGTCACAACTTGAAAACATGGATGTTGAGGATGAAGATGAAGATGACGATGACGATGA
. : . : . : . : . : . :
JMFF031E21- CGGCCCTCCGCCCGGCTTCGCTGAACCACACCAACCAGAAACGCCGCCGCTGTCGGCTAC
JMFF019E02- CGGCCCTCCGCCCGGCTTCGCTGAACCACACCAACCAGAAACGCCGCCGCTGTCGGCTAC
JMFF031F23- CGGCCCTCCGCCCGGCTTCGCTGAACCACACCAACCAGAAACGCCGCCGCTGTCGGCTAC
____________________________________________________________
consensus CGGCCCTCCGCCCGGCTTCGCTGAACCACACCAACCAGAAACGCCGCCGCTGTCGGCTAC
. : . : . : . : . : . :
JMFF031E21- AAGTCATTCTGATACACAAAGGTTAAGAAATCAGGGGCTTTCAGATGTAGAAATTGGGAA
JMFF019E02- AAGTCATTCTGATACACAAAGGTTAAGAAATCAGGGGCTTTCAGATGTAGAAATTGGGAA
JMFF031F23- AAGTCATTCTGATACACAAAGGTTAAGAAATCAGGGGCTTTCAGATGTAGAAATTGGGAA
____________________________________________________________
consensus AAGTCATTCTGATACACAAAGGTTAAGAAATCAGGGGCTTTCAGATGTAGAAATTGGGAA
. : . : . : . : . : . :
JMFF031E21- AAAACAGAACGAGACTAAATATGAAGAAGACAGGCCTCCATTGGGCTCGCAATCTACAAG
JMFF019E02- AAAACAGAACGAGACTAAATATGAAGAAGACAGGCCTCCATTGGGCTCGCAATCTACAAG
JMFF031F23- AAAACAGAACGAGACTAAATATGAAGAAGACAGGCCTCCATTGGGCTCGCAATCTACAAG
JMSF052E01+ CGAGACTAAATATGAAGAAGACAGGCCTCCATNGGGCTCGCAATCTACAAG
____________________________________________________________
consensus AAAACAGAACGAGACTAAATATGAAGAAGACAGGCCTCCATTGGGCTCGCAATCTACAAG
. : . : . : . : . : . :
JMFF031E21- TCCAAAGCAACCTCATCAATCTATGACATCATCTGAACTTGTCTCTGATACACAAATGAG
JMFF019E02- TCCAAAGCAACCTCATCAATCTATGACATCATCTGAACTTGTCTCTGATACACAAATGAG
JMFF031F23- TCCAAAGCAACCTCATCAATCTATGACATCATCTGAACTTGTCTCTGATACACAAATGAG
JMSF052E01+ TCCAAAGCAACCTCATCAATCTANGACATCATCTGAACTCGTCTCTGATNCACAAATGAG
____________________________________________________________
consensus TCCAAAGCAACCTCATCAATCTATGACATCATCTGAACTTGTCTCTGATACACAAATGAG
. : . : . : . : . : . :
JMFF031E21- AAGCATTGAAGAAGATGATGATGGTCCACCACCAGGGTGGCAATGGAACCCTCAACAACA
JMFF019E02- AAGCATTGAAGAAGATGATGATGGTCCACCACCAGGGTGGCAATGGAACCCTCAACAACA
JMFF031F23- AAGCATTGAAGAAGATGATGATGGTCCACCACCAGGGTGGCAATGGAACCCTCAACAACA
JMSF052E01+ AAGCATTGAAGAAGATGATGATGGTCCACCACCAGGGTGGCAATGGAACCCTCAACAACA
____________________________________________________________
consensus AAGCATTGAAGAAGATGATGATGGTCCACCACCAGGGTGGCAATGGAACCCTCAACAACA
. : . : . : . : . : . :
JMFF031E21- GCCACTGCCAGAATCAATACCACCACCTGGGCTCCAATCAGCTCCATCTTCTAGTATACA
JMFF019E02- GCCACTGCCAGAATCAATACCACCACCTGGGCTCCAATCAGCTCCATCTTCTAGTATACA
JMFF031F23- GCCACTGCCAGAATCAATACCACCACCTGGGCTCCAATCAGCTCCATCTTCTAGTATACA
JMSF052E01+ GCCACTGCCAGAATCAATACCACCACCTGGGCTCCAATCAGCTCCATCTTCTAGTATACA
____________________________________________________________
consensus GCCACTGCCAGAATCAATACCACCACCTGGGCTCCAATCAGCTCCATCTTCTAGTATACA
. : . : . : . : . : . :
JMFF031E21- AACAGGGATCATTCCAG-AAGATGATGATGGCCCCCCACCANGGTGGCA
JMFF019E02- AACAGGGATCATTCAAGAAAGATGATGATGGCCCCCCCCCAGGGTGGCA
JMFF031F23- AACAGGGATCATTCAAGAAAGATGATGATGGCCCCCCACCAGGGTGGCA
JMSF052E01+ AACAGGGATCATTCAAG-AAGATGATGATGGCCCCCCACCAGGGTGGCAGTTGATCTCTT
____________________________________________________________
consensus AACAGGGATCATTCAAG-AAGATGATGATGGCCCCCCACCAGGGTGGCAGTTGATCTCTT
. : . : . : . : . : . :
JMSF052E01+ CTCAACAGAGACAGCCACAAACTATTCCATCGTTACTGCCCCAGTCAGTAGCTCCTTCTG
____________________________________________________________
consensus CTCAACAGAGACAGCCACAAACTATTCCATCGTTACTGCCCCAGTCAGTAGCTCCTTCTG
. : . : . : . : . : . :
JMSF052E01+ ATATTGAAAAGGAGAATAAAGGAGGAAACAAAGGGGAAATTGAATGGCGCCAATCGGGCT
____________________________________________________________
consensus ATATTGAAAAGGAGAATAAAGGAGGAAACAAAGGGGAAATTGAATGGCGCCAATCGGGCT
. : . : . : . : . : . :
JMSF052E01+ CAGAATCCTCTCCTATGCCAGAATATTCATCCACACCTACTCGACATTCATCAGTAGCTT
rJMFF019E02+ CTATGCCAGAATATTCATCCACACCTACTCGACATTCATCAGTAGCTT
rJMFF031F23+ CTATGCCAGAATATTCATCCACACCTACTCGACATTCATCAGTAGCTT
____________________________________________________________
consensus CAGAATCCTCTCCTATGCCAGAATATTCATCCACACCTACTCGACATTCATCAGTAGCTT
. : . : . : . : . : . :
JMSF052E01+ CTTCTGATATTGAAATGGCTACCAAACAACAAAGCATAAAAAATGAGGAGAAAAAACTTC
rJMFF019E02+ CTTCTGATATTGAAATGGCTACCAAACAACAAAGCATAAAAAATGAGGAGAAAAAACTTC
rJMFF031F23+ CTTCTGATATTGAAATGGCTACCAAACAACAAAGCATAAAAAATGAGGAGAAAAAACTTC
____________________________________________________________
consensus CTTCTGATATTGAAATGGCTACCAAACAACAAAGCATAAAAAATGAGGAGAAAAAACTTC
. : . : . : . : . : . :
JMSF052E01+ GTACAGATAGGGGACCTTCTCAACGTATCATATCTCGACTCCCACCAGCTGCATTGCAAA
rJMFF019E02+ GTACAGATAGGGGACCTTCTCAACGTATCATATCTCGACTCCCACCAGCTGCATTGCAAA
rJMFF031F23+ GTACAGATAGGGGACCTTCTCAACGTATCATATCTCGACTCCCACCAGCTGCATTGCAAA
____________________________________________________________
consensus GTACAGATAGGGGACCTTCTCAACGTATCATATCTCGACTCCCACCAGCTGCATTGCAAA
. : . : . : . : . : . :
JMSF052E01+ TTTCTTCTGAGGTTGGTCAATTGGTATGTGGTACTTGCCGACAGTTGCTTTCATAT
rJMFF019E02+ TTTCTTCTGAGGTTGGTCAATTGGTATGTGGTACTTGCCGACAGTTGCTTTCATATCCTC
rJMFF031F23+ TTTCTTCTGAGGTTGGTCAATTGGTATGTGGTACTTGCCGACAGTTGCTTTCATATCCTC
____________________________________________________________
consensus TTTCTTCTGAGGTTGGTCAATTGGTATGTGGTACTTGCCGACAGTTGCTTTCATATCCTC
. : . : . : . : . : . :
rJMFF019E02+ GAGGTTCTAAATGGGTTCAATGCTCGGCCTGCCAGACAGTTAATCTTGCCCTTGAAGGTC
rJMFF031F23+ GAGGTTCTAAATGGGTTCAATGCTCGGCCTGCCAGACAGTTAATCTTGCCCTTGAAGGTC
____________________________________________________________
consensus GAGGTTCTAAATGGGTTCAATGCTCGGCCTGCCAGACAGTTAATCTTGCCCTTGAAGGTC
. : . : . : . : . : . :
rJMFF019E02+ ATCAAATAGGACAAGTCAAATGCGGGGGCTGCACAGTATTGCTAATGTACCCATATGGAG
rJMFF031F23+ ATCAAATAGGACAAGTCAAATGCGGGGGCTGCACAGTATTGCTAATGTACCCATATGGAG
____________________________________________________________
consensus ATCAAATAGGACAAGTCAAATGCGGGGGCTGCACAGTATTGCTAATGTACCCATATGGAG
. : . : . : . : . : . :
rJMFF019E02+ CACCGTCGGTTAAATGTTCTTCTTGTCACTTTGTCACGAGAATTGGGGCGCACAACAGGC
rJMFF031F23+ CACCGTCGGTTAAATGTTCTTCTTGTCACTTTGTCACGAGAATTGGGGCGCACAACAGGC
____________________________________________________________
consensus CACCGTCGGTTAAATGTTCTTCTTGTCACTTTGTCACGAGAATTGGGGCGCACAACAGGC
. : . : . : . : . : . :
rJMFF019E02+ GACCTCATCTGGCTGCACAACAGGCTCGGAGACAGCGCCCTTCTCATCAAGCACACTAGG
rJMFF031F23+ GACCTCATCTGGCTGCACAACAGGCTCGGAGACAGCGCCCTTCTCATCAAGCACACTAGG
____________________________________________________________
consensus GACCTCATCTGGCTGCACAACAGGCTCGGAGACAGCGCCCTTCTCATCAAGCACACTAGG
. : . : . : . : . : . :
rJMFF019E02+ GGGTTCTTATGTCCATTTTGTTCTAGAGCTGGGGAGTGGTCCTGTTGAGACTAGACTTTA
rJMFF031F23+ GGGTTCTTATGTCCATTTTGTTCTAGAGCTGGGGAGTGGTCCTGTTGAGACTAGACTTTA
____________________________________________________________
consensus GGGTTCTTATGTCCATTTTGTTCTAGAGCTGGGGAGTGGTCCTGTTGAGACTAGACTTTA
. : . : . : . : . : . :
rJMFF019E02+ CCCTGTTCTGACATTTACATTTACCTATTTGGTGTAAATTCTCCTGTTGCCTTTTTGTTC
rJMFF031F23+ CCCTGTTCTGACATTTACATTTACCTATTTGGTGTAAATTCTCCTGTTGCCTTTTTGTTC
____________________________________________________________
consensus CCCTGTTCTGACATTTACATTTACCTATTTGGTGTAAATTCTCCTGTTGCCTTTTTGTTC
. : . : . : . : . : . :
rJMFF019E02+ ACATGTTTAGCTCTTGCTAATCAGTTGAGACTTTACCCTTTTGAAGTTTCACTTCTGTAG
rJMFF031F23+ ACATGTTTAGCTCTTGCTAATCAGTTGAGACTTTACCCTTTTGAAGTTTCACTTCTGTAG
____________________________________________________________
consensus ACATGTTTAGCTCTTGCTAATCAGTTGAGACTTTACCCTTTTGAAGTTTCACTTCTGTAG
. : . : . : . : . : . :
rJMFF019E02+ TTGTATTTGTTTTAACAGTTTGTACTGATGCAAGATGTATACCAATGCCGATCAAA
rJMFF031F23+ TTGTATTTGTTTTAACAGTTTGTACTGATGCAAGATGTATACCAATGCCGATCAAAGACT
____________________________________________________________
consensus TTGTATTTGTTTTAACAGTTTGTACTGATGCAAGATGTATACCAATGCCGATCAAAGACT