Contig 006886:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031E05Sequence540002429 (5)ref|XP_006343519.1|3e-37PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] 737006886 (4)ref|XP_009609945.1|96.7PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref|
JMSF013J05Sequence577002429 (5)ref|XP_006343519.1|5e-45PREDICTED: uncharacterized protein LOC102599775 isoform X1 [Solanum tuberosum] 689006886 (4)ref|XP_009609945.1|93.6PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref|
JMSF045A11Sequence638002429 (5)ref|XP_009781696.1|212PREDICTED: uncharacterized protein LOC104230558 [Nicotiana sylvestris] ref|XP_00587006886 (4)
JMSF046K20Sequence736002429 (5)ref|XP_009781696.1|207PREDICTED: uncharacterized protein LOC104230558 [Nicotiana sylvestris] ref|XP_00647006886 (4)ref|XP_009609945.1|87.4PREDICTED: uncharacterized protein LOC104103724 [Nicotiana tomentosiformis] ref|

Alignment

This contig is upended


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rJMFF031E05+                                            GTGTTTTTCAGAGAACAAGCCAGGGT
                      ____________________________________________________________
consensus                                               GTGTTTTTCAGAGAACAAGCCAGGGT
 
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rJMSF046K20+                                                         TTACAGTTTCTCC
rJMSF013J05+                                   TTTTAATAAAGCACAATGAGCTTTACAGGTTCTCC
rJMFF031E05+          GAGTCTGATTCATCATCATCATCATTTTTAATAAAGCACAATGAGCTTTACAGNTTCTCC
                      ____________________________________________________________
consensus             GAGTCTGATTCATCATCATCATCATTTTTAATAAAGCACAATGAGCTTTACAGTTTCTCC
 
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rJMSF045A11+                                                               GGGATCT
rJMSF046K20+          CATAGAATTCCCTCATTCACATTGACTGGAACTGAAAGAGAAGGTGTGCCTGAGGGATCT
rJMSF013J05+          CATAAAATTCCGTCATTCAGATTGACTGGAACTGAAAGAGAAGGTGTGCCTGAGGGATCT
rJMFF031E05+          CATAAAATTCCGTCATTCAGATTGACTGGAACTGAAAGAGAAGGTGTGCCTGAGGGATCT
                      ____________________________________________________________
consensus             CATAAAATTCCGTCATTCAGATTGACTGGAACTGAAAGAGAAGGTGTGCCTGAGGGATCT
 
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rJMSF045A11+          TTTGAACTTGATCTTGCTTCTATACCTCAAGATCCTAATGACCTTTGGTATCCTCTGAAA
rJMSF046K20+          TTTGAACNTGATCTTGCTTCTATACCTCAAGATCCTAATGACCTTTGGTATCCTCTGAAA
rJMSF013J05+          TTTGAACTTGATCTTGCTTCTATACCTCAAGATCCTAATGACCTTTGGTATCCTCTGAAA
rJMFF031E05+          TTTGAACTTGATCTTGCTTCTATACCTCAAGATCCTAATGACCTTTGGTATCCTCTGAAA
                      ____________________________________________________________
consensus             TTTGAACTTGATCTTGCTTCTATACCTCAAGATCCTAATGACCTTTGGTATCCTCTGAAA
 
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rJMSF045A11+          GAGGCGATCAGAAATGTTGAACCAGAACTGAAGAGGCCCGGCAAAAATGGTAAAACAATG
rJMSF046K20+          GAGGCAAACAGAAATGGTGAACCAGAACTGAAGAGTCCCNGAAGAAACGGTAAAACCNGG
rJMSF013J05+          GAGGCGATCAGAAATGTTGAACCAGAACTGAAGAGGCCCGGCAAAAATGGTAAAACAATG
rJMFF031E05+          GAGGCGATCAGAAATGTTGAACCAGAACTGAAGAGGCCCGGCAAAAATGGTAAAACAATG
                      ____________________________________________________________
consensus             GAGGCGATCAGAAATGTTGAACCAGAACTGAAGAGGCCCGGCAAAAATGGTAAAACAATG
 
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rJMSF045A11+          CCACCCAAGAAGGTTGGCACACCTAACAAGTCCACTGATTGCAAAGAGGTGAGTGATAGT
rJMSF046K20+          ATACCCAAGAAGGTTAGTACACCTAACAAGTCCNCTGATTGGAAAGAGGTGAGTGATGGT
rJMSF013J05+          CCACCCAAGAAGGTTGGCACACCTAACAAGTCCACTGATTGCAAAGAGGTGAGTGATAGT
rJMFF031E05+          CCACCCAAGAAGGTTGGCACACCTAACAAGTCCACTGATTGCAAAGAGGTGAGTGATAGT
                      ____________________________________________________________
consensus             CCACCCAAGAAGGTTGGCACACCTAACAAGTCCACTGATTGCAAAGAGGTGAGTGATAGT
 
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rJMSF045A11+          GATGGTGATGGAGAGATGTGTATGCTTCGAAAGTCACCAAGGGCTTCCAAGAAAAGATAG
rJMSF046K20+          GATGGTGAGGGTGAGATGCCTAAGCTTCGAAAGTCGCCAAGGGCTGCCAAGAAAAGATAA
rJMSF013J05+          GATGGTGATGGAGAGATGTGTATGCTTCGAAAGTCACCAAGGGCTTCCAAGAAAAGATAG
rJMFF031E05+          GATGGTGATGGAGAGATGTGTATGCTTCGAAAGTCACCAAGGGCTTCCAAGAAAAGATAG
                      ____________________________________________________________
consensus             GATGGTGATGGAGAGATGTGTATGCTTCGAAAGTCACCAAGGGCTTCCAAGAAAAGATAG
 
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rJMSF045A11+          A---------AAACCGATCAATTCTATTCCATTGCTCTCTGAACTAAAAGATAGTACTAG
rJMSF046K20+          AAGAAAAAAAAACCCGATCAATTCTATTCCATTGCTCTCTAAACTAAAAGATAGTACTAG
rJMSF013J05+          A---------AAACCGATCAATTCTATTCCATTGCTCTCTGAACTAAAAGATAGTACTAG
rJMFF031E05+          A---------AAACCGATCAATTCTATTCCATTGCTCTCTGAACTAAAAGATAGTACTAG
                      ____________________________________________________________
consensus             A---------AAACCGATCAATTCTATTCCATTGCTCTCTGAACTAAAAGATAGTACTAG
 
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rJMSF045A11+          GGACCAGTGCGGTAGCAGTGCTGAAAGATTCTAACTTTTAGTGATTGGTGATGGTGATGG
rJMSF046K20+          GGACCAGTGCAGTAGCAGTGCTGAAAGATTCTAACTTTTAGTGATTGGTGATGGTGATGG
rJMSF013J05+          GGACCAGTGCGGTAGCAGTGCTGAAAGATTCTAACTTTTAGTGATTGGTGATGGTGATGG
rJMFF031E05+          GGACCAGTGCGGTAGCAGTGCTGAAAGATTCTAACTTTTAGTGATTGGTGATGGTGATGG
                      ____________________________________________________________
consensus             GGACCAGTGCGGTAGCAGTGCTGAAAGATTCTAACTTTTAGTGATTGGTGATGGTGATGG
 
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rJMSF045A11+          TGGATTGGTGGTGGTAAGAGTTTGAAGTTTTTCAACCTTCTTCCTCTCTTCAGTCATCAT
rJMSF046K20+          TGGATTGGTGGTGGTAAGAGTTCGAAGTTTTTCGACCTTTTTCCTCTCTTCAGTCATCAT
rJMSF013J05+          TGGATTGGTGGTGGTAAGAGTTTGAAGTTTTTCAACCTTCTTCCTCTCTTCAGTCATCAT
rJMFF031E05+          TGGATTGGTGGTGGTAAGAGTTTGAAGTTTTTCAACCTTCTTCCTCTCTTCAGTCATCAT
                      ____________________________________________________________
consensus             TGGATTGGTGGTGGTAAGAGTTTGAAGTTTTTCAACCTTCTTCCTCTCTTCAGTCATCAT
 
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rJMSF045A11+          CCCTGTGAAATATGTTATGTTATTTGGAGGCCAAGTGAATGGTTAACAGATTGAATTGGT
rJMSF046K20+          CCCTGTGAAATATGTTGTGTTATGTGGAGGCCAAGTGAATGTTTAACAGATTGAATTGGT
rJMSF013J05+          CCCTGTGAAATATGTTATGTTATTTGGAGGCCAAGTGAATGGTTAACAGATTGAATTGGT
rJMFF031E05+          CCCTGTGAAATATGTTATGTTATTTGGAGGCCAAGTGAATGGTTAACAGATTGAATTGGT
                      ____________________________________________________________
consensus             CCCTGTGAAATATGTTATGTTATTTGGAGGCCAAGTGAATGGTTAACAGATTGAATTGGT
 
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rJMSF045A11+          AGGTGGATGTGTTATGTGTATTATTGTATGTTTTGTGGTTTAGGATAATGCTTTTATTTT
rJMSF046K20+          AGGTAAATGTGTTATGTGTA                                        
rJMSF013J05+          AGGTGGATGTGTTATGTGTATTATTGTATGTTTTGTGGTTTAGGATAATGCTTTTATTTT
rJMFF031E05+          AGGTGGATGTGTTATGTGTATTATTGTATGTTTTGTGGTTTAGGATAATGCTTTTATTTT
                      ____________________________________________________________
consensus             AGGTGGATGTGTTATGTGTATTATTGTATGTTTTGTGGTTTAGGATAATGCTTTTATTTT
 
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rJMSF045A11+          TATCAAGACTTACGTTTTGAC                                       
rJMSF013J05+          TATCAAGACTTACGTTTTGAC                                       
rJMFF031E05+          TATCAAGACTTACGTTTTGACTTTCCTTGTATGATACTTATGGGGAGTTGTATTTTACCC
                      ____________________________________________________________
consensus             TATCAAGACTTACGTTTTGACTTTCCTTGTATGATACTTATGGGGAGTTGTATTTTACCC