Contig 006885:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031B09Sequence471011943 (2)ref|XP_011093162.1|2e-62PREDICTED: cell division protein FtsY homolog, chloroplastic [Sesamum indicum]715006885 (2)ref|XP_008775398.1|1e-20PREDICTED: cell division protein FtsY homolog, chloroplastic [Phoenix dactylife
JMSF012K24Sequence318011943 (2)ref|XP_009760453.1|6e-30PREDICTED: cell division protein FtsY homolog, chloroplastic [Nicotiana sylvest718006885 (2)ref|XP_008232752.1|3e-82PREDICTED: cell division protein FtsY homolog, chloroplastic [Prunus mume] ref|

Alignment

This contig is upended


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rJMSF012K24+                     CTGTGAGATTGTCGTTGCTGAGACGGAAAAGCCAAAGCATCATCAGTTC
                      ____________________________________________________________
consensus                        CTGTGAGATTGTCGTTGCTGAGACGGAAAAGCCAAAGCATCATCAGTTC
 
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rJMSF012K24+          TTTCACAGGCTGTTAAAAGAGGGAAGGAACAAGGCGTTGATATCGTTTTATGCGACACAT
                      ____________________________________________________________
consensus             TTTCACAGGCTGTTAAAAGAGGGAAGGAACAAGGCGTTGATATCGTTTTATGCGACACAT
 
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rJMSF012K24+          CTGGACGTTTGCACACTAATTATAGCCTGATGGAAGAACTGGTTGCATGTAAGAAAACTG
                      ____________________________________________________________
consensus             CTGGACGTTTGCACACTAATTATAGCCTGATGGAAGAACTGGTTGCATGTAAGAAAACTG
 
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rJMSF012K24+          TTAGTAAAATTGTTCCCGGGGCACCCAATGAAATTTTGCTAGTGCTAGACGGAACAACAG
                      ____________________________________________________________
consensus             TTAGTAAAATTGTTCCCGGGGCACCCAATGAAATTTTGCTAGTGCTAGACGGAACAACAG
 
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rJMSF012K24+          GTTTAAATATGCTCCCACAAGCAAGAGAGTTTAATGAGGTTGTTGGAGTAACTGGTTTCA
                      ____________________________________________________________
consensus             GTTTAAATATGCTCCCACAAGCAAGAGAGTTTAATGAGGTTGTTGGAGTAACTGGTTTCA
 
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rJMSF012K24+          TATTGACAAAACTTGATGGTTCTGCTAGAGGTGGTTGTGTGGTCAGTGTAGTAGATGAGC
rJMFF031B09+               ACAAAACTTGATGGTTCTGCTAGAGGTGGTTGTGTGGTCAGTGTAGTAGATGAGC
                      ____________________________________________________________
consensus             TATTGACAAAACTTGATGGTTCTGCTAGAGGTGGTTGTGTGGTCAGTGTAGTAGATGAGC
 
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rJMSF012K24+          TAGGTATTCCCGTAAAGTTTGTAGGCGTTGGTGAAGGCATAGATGACCTCCAACCATTCG
rJMFF031B09+          TAGGTATTCCCGTAAAGTTTGTAGGCGTTGGTGAAGGCATAGATGACCTCCAACCATTCG
                      ____________________________________________________________
consensus             TAGGTATTCCCGTAAAGTTTGTAGGCGTTGGTGAAGGCATAGATGACCTCCAACCATTCG
 
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rJMSF012K24+          ATGCGGAGACATTTGTTAACGCAATATTCTCGTGAGGGGAGGTAAGTTTGAAGTGCACAT
rJMFF031B09+          ATGCGGAGACATTTGTTAACGCAATATTCTCGTGAGGGGAGGTAAGTTTGAAGTGCACAT
                      ____________________________________________________________
consensus             ATGCGGAGACATTTGTTAACGCAATATTCTCGTGAGGGGAGGTAAGTTTGAAGTGCACAT
 
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rJMSF012K24+          GGCATGATTGGATGAGATGAAATGTGCCGAGGTTGCAACCGAGTTGAGGAGATGCCTGCC
rJMFF031B09+          GGCATGATTGGATGAGATGAAATGTGCCGAGGTTGCAACCGAGTTGAGGAGATGCCTGCC
                      ____________________________________________________________
consensus             GGCATGATTGGATGAGATGAAATGTGCCGAGGTTGCAACCGAGTTGAGGAGATGCCTGCC
 
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rJMSF012K24+          ATTGACCAATAGGATCTTAGTTGCTTCTTTTGAATGAAAGGTTGTTTTGAATATCATTTT
rJMFF031B09+          ATTGACCAATAGGATCTTAGTTGCTTCTTTTGAATGAAAGGTTGTTTTGAATATCATTTT
                      ____________________________________________________________
consensus             ATTGACCAATAGGATCTTAGTTGCTTCTTTTGAATGAAAGGTTGTTTTGAATATCATTTT
 
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rJMSF012K24+          CAAAGGCAGGCAGGGAGGCAGCCCCCTGTTGTCATCTTCTTTCCAGTTTACACCTGAGTT
rJMFF031B09+          CAAAGGCAGGCAGGGAGGCAGCCCCCTGTTGTCATCTTCTTTCCAGTTTACACCTGAGTT
                      ____________________________________________________________
consensus             CAAAGGCAGGCAGGGAGGCAGCCCCCTGTTGTCATCTTCTTTCCAGTTTACACCTGAGTT
 
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rJMSF012K24+          GAGTTGAAAATAACCATAGCCAACAGTGTGGAATTTGAATTTTTCAATCAGAGAAATTGA
rJMFF031B09+          GAGTTGAAAATAACCATAGCCAACAGTGTGGAATTTGAATTTTTCAATCAGAGAAATTGA
                      ____________________________________________________________
consensus             GAGTTGAAAATAACCATAGCCAACAGTGTGGAATTTGAATTTTTCAATCAGAGAAATTGA
 
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rJMSF012K24+          ACCCCCCCT                                                   
rJMFF031B09+          ACCCCCCCTTTAGGGGCTAGGGCTGAACCCCCAAAGTGTTTGCTATATAGACATTTTGTT
                      ____________________________________________________________
consensus             ACCCCCCCTTTAGGGGCTAGGGCTGAACCCCCAAAGTGTTTGCTATATAGACATTTTGTT
 
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rJMFF031B09+          GATTCAATTTCTTTTTGGCTTCAAAAGTTGAGGATTATTAGGGCTAGGGCTGAATCCCCC
                      ____________________________________________________________
consensus             GATTCAATTTCTTTTTGGCTTCAAAAGTTGAGGATTATTAGGGCTAGGGCTGAATCCCCC
 
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rJMFF031B09+          AATATCATATCTTGTTTTAAGTTTTAAATTGAAACTTTCTTTTTTGTTAGACCACGATGT
                      ____________________________________________________________
consensus             AATATCATATCTTGTTTTAAGTTTTAAATTGAAACTTTCTTTTTTGTTAGACCACGATGT
 
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rJMFF031B09+          GTCTTTCTTGAGTAGATTCTAACTATAGGAGACATATTTAAGTCTGTATCATACTAATAA
                      ____________________________________________________________
consensus             GTCTTTCTTGAGTAGATTCTAACTATAGGAGACATATTTAAGTCTGTATCATACTAATAA
 
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rJMFF031B09+          TCTCTGTTTGCACTAGACTGATCCAATTAAGGGACAAAGTGCTGGACATATTAAGGATCA
                      ____________________________________________________________
consensus             TCTCTGTTTGCACTAGACTGATCCAATTAAGGGACAAAGTGCTGGACATATTAAGGATCA