| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030B20 | Sequence | 436 | 002100 (6) | 620 | 006880 (5) | ref|XP_008369312.1| | 84.7 | PREDICTED: uncharacterized protein LOC103432881 [Malus domestica] ref|XP_0083693 | |||
| JMSF007N03 | Sequence | 336 | 002100 (6) | 731 | 006880 (5) | ref|XP_011076628.1| | 166 | PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum] | |||
| JMSF012P24 | Sequence | 266 | 002100 (6) | 742 | 006880 (5) | ref|XP_011076628.1| | 174 | PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum] | |||
| JMSF013I23 | Sequence | 367 | 002100 (6) | ref|XP_009765484.1| | 181 | PREDICTED: uncharacterized protein LOC104217025 [Nicotiana sylvestris] | 733 | 006880 (5) | ref|XP_011076628.1| | 166 | PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum] |
| JMSF048F09 | Sequence | 690 | 002100 (6) | ref|XP_009765484.1| | 144 | PREDICTED: uncharacterized protein LOC104217025 [Nicotiana sylvestris] | 751 | 006880 (5) | ref|XP_011076628.1| | 180 | PREDICTED: uncharacterized protein LOC105160827 [Sesamum indicum] |
This contig is upended
. : . : . : . : . : . :
rJMSF012P24+ TCGGTTTACTATACGGTGGCNTTTGGAGGATTCAAA
rJMSF013I23+ GGCTTTTGGAGGATTCAAA
rJMSF048F09+ CGCCTTCGGTTTACTATACGGTGGCTTTTGGAGGATTCAAA
rJMSF007N03+ TTTGGAGGATTCAAA
____________________________________________________________
consensus CGCCTTCGGTTTACTATACGGTGGCTTTTGGAGGATTCAAA
. : . : . : . : . : . :
rJMSF012P24+ TGAGAAAACGGTACAATTTGCCTTCGTATAATTCGTGTTGTGGTAAATCATCTGTTGCCG
rJMSF013I23+ TGAGAAAACGGTACAATTTGCCTTCGTATAATTCGTGTTGTGGTAAATCATCTGTTGCCG
rJMSF048F09+ TGAGAAAACGGTACAATTTGCCTTCGTATAATTCGTGTTGTGGTAAATCATCTGTTGCCG
rJMSF007N03+ TGAGAAAACGGTACAATTTGCCTTCGTATAATTCGTGTTGTGGTAAATCATCTGTTGCCG
____________________________________________________________
consensus TGAGAAAACGGTACAATTTGCCTTCGTATAATTCGTGTTGTGGTAAATCATCTGTTGCCG
. : . : . : . : . : . :
rJMSF012P24+ ATTGTGCACTATGGCTATTCTGTTGCTGGTGCTCTCTCGCCCAGGAAGTGAGGACGGGAA
rJMSF013I23+ ATTGTGCACTATGGCTATTCTGTTGCTGGTGCTCTCTCGCCCAGGAAGTGAGGACGGGAA
rJMSF048F09+ ATTGTGCACTATGGCTATTCTGTTGCTGGTGCTCTCTCGCCCAGGAAGTGAGGACGGGAA
rJMSF007N03+ ATTGTGCACTATGGCTATTCTGTTGCTGGTGCTCTCTCGCCCAGGAAGTGAGGACGGGAA
rJMFF030B20+ CCAGGAAGTGAGGACGGGAA
____________________________________________________________
consensus ATTGTGCACTATGGCTATTCTGTTGCTGGTGCTCTCTCGCCCAGGAAGTGAGGACGGGAA
. : . : . : . : . : . :
rJMSF012P24+ ACTCATACGACATCGTGGAGGATAAGTTCTACAGGAAACGACACGATAATGGCGAACAGC
rJMSF013I23+ ACTCATACGACATCGTGGAGGATAAGTTCTACAGGAAACGACACGATAATGGCGAACAGC
rJMSF048F09+ ACTCATACGACATCGTGGAGGATAAGTTCTACAGGAAACGACACGATAATGGCGAACAGC
rJMSF007N03+ ACTCATACGACATCGTGGAGGATAAGTTCTACAGGAAACGACACGATAATGGCGAACAGC
rJMFF030B20+ ACTCATACGACATCGTGGAGGATAAGTTNTACAGGAAACGACACGATAATGGCGAACAGC
____________________________________________________________
consensus ACTCATACGACATCGTGGAGGATAAGTTCTACAGGAAACGACACGATAATGGCGAACAGC
. : . : . : . : . : . :
rJMSF012P24+ CTCCTCCCGTTTCGCCTTTGCCCCGAGAAGATGGTGTCTTTAGGTCAAGTCCCGACCAAA
rJMSF013I23+ CTCCTCCCGTTTCGCCTTTGCCCCGAGAAGATGGTGTCTTTAGGTCAAGTCCCGACCAAA
rJMSF048F09+ CTCCTCCCGTTTCGCCTTTGCCCCGAGAAGATGGTGTCTTTAGGTCAAGTCCCGACCAAA
rJMSF007N03+ CTCCTCCCGTTTCGCCTTTGCCCCGAGAAGATGGTGTCTTTAGGTCAAGTCCCGACCAAA
rJMFF030B20+ CTCCTCCCGTTTCGCCTTTGCCCCGAGAAGATGGTGTCTTTAGGTCAAGTCCCGACCAAA
____________________________________________________________
consensus CTCCTCCCGTTTCGCCTTTGCCCCGAGAAGATGGTGTCTTTAGGTCAAGTCCCGACCAAA
. : . : . : . : . : . :
rJMSF012P24+ AACCGAAAAGTACCACACCAAGCCCGAGCAGATTTGCAATGGAACATTGCAGTCCAGGTA
rJMSF013I23+ AACCGAAAAGTACCACACCAAGCCCGAGCAGATTTGCAATGGAACATTGCAGTCCAGGTA
rJMSF048F09+ AACCGAAAAGTACCACACCAAGCCCGAGCAGATTTGCAATGGAACATTGCAGTCCAGGTA
rJMSF007N03+ AACCGAAAAGTACCACACCAAGCCCGAGCAGATTTGCAATGGAACATTGCAGTCCAGGTA
rJMFF030B20+ AACCGAAAAGTACCACACCAAGCCCGAGCAGATTTGCAATGGAACATTGCAGTCCAGGTA
____________________________________________________________
consensus AACCGAAAAGTACCACACCAAGCCCGAGCAGATTTGCAATGGAACATTGCAGTCCAGGTA
. : . : . : . : . : . :
rJMSF012P24+ ACAATGAACCTAATTCGGGAGGTAGCCATGATCCTATGGCGCCTCCTTCTCCCCCGATTA
rJMSF013I23+ ACAATGAACCTAATTCGGGAGGTAGCCATGATCCTATGGCGCCTCCTTCTCCCCCGATTA
rJMSF048F09+ ACAATGAACCTAATTCGGGAGGTAGCCATGATCCTATGGCGCCTCCTTCTCCCCCGATTA
rJMSF007N03+ ACAATGAACCTAATTCGGGAGGTAGCCATGATCCTATGGCGCCTCCTTCTCCCCCGATTA
rJMFF030B20+ ACAATGAACCTAATTCGGGAGGTAGCCATGATCCTATGGCGCCTCCTTCTCCCCCGATTA
____________________________________________________________
consensus ACAATGAACCTAATTCGGGAGGTAGCCATGATCCTATGGCGCCTCCTTCTCCCCCGATTA
. : . : . : . : . : . :
rJMSF012P24+ TACAACGAGAAGATGTTTGACACAACGAAATTTTGAGGTTCCGTTTGAAGTTTGGATTAC
rJMSF013I23+ TACAACGAGAAGATGTTTGACACAACGAAATTTTGAGGTTCCGTTTGAAGTTTGGATTAC
rJMSF048F09+ TACAACGAGAAGATGTTTGACACAACGAAATTTTGAGGTTCCGTTTGAAGTTTGGATTAC
rJMSF007N03+ TACAACGAGAAGATGTTTGACACAACGAAATTTTGAGGTTCCGTTTGAAGTTTGGATTAC
rJMFF030B20+ TACAACGAGAAGATGTTTGACACAACGAAATTTTGAGGTTCCGTTTGAAGTTTGGATTAC
____________________________________________________________
consensus TACAACGAGAAGATGTTTGACACAACGAAATTTTGAGGTTCCGTTTGAAGTTTGGATTAC
. : . : . : . : . : . :
rJMSF012P24+ AACTTACGAGTTACGAGAGATTCTTGTGTAGACCACATTTGTTGTCCATTGGAATCTTGT
rJMSF013I23+ AACTTACGAGTTACGAGAGATTCTTGTGTAGACCACATTTGTTGTCCATTGGAATCTTGT
rJMSF048F09+ AACTTACGAGTTACGAGAGATTCTTGTGTAGACCACATTTGTTGTCCATTGGAATCTTGT
rJMSF007N03+ AACTTACGAGTTACGAGAGATTCTTGTGTAGACCACATTTGTTGTCCATTGGAATCTTGT
rJMFF030B20+ AACTTACGAGTTACGAGAGATTCTTGTGTAGACCACATTTGTTGTCCATTGGAATCTTGT
____________________________________________________________
consensus AACTTACGAGTTACGAGAGATTCTTGTGTAGACCACATTTGTTGTCCATTGGAATCTTGT
. : . : . : . : . : . :
rJMSF012P24+ ATACATGCAAGATTGCAATGAAGCTGCAGAGATGGGGTTCAACTCGGGATTTTTCTTGGA
rJMSF013I23+ ATACATGCAAGATTGCAATGAAGCTGCAGAGATGGGGTTCAACTCGGGATTTTTCTTGGA
rJMSF048F09+ ATACATGCAAGATTGCAATGAAGCTGCAGAGATGGGGTTCAACTCGGGATTTTTCTTGGA
rJMSF007N03+ ATACATGCAAGATTGCAATGAAGCTGCAGAGATGGGGTTCAACTCGGGATTTTTCTTGGA
rJMFF030B20+ ATACATGCAAGATTGCAATGAAGCTGCAGAGATGGGGTTCAACTCGGGATTTTTCTTGGA
____________________________________________________________
consensus ATACATGCAAGATTGCAATGAAGCTGCAGAGATGGGGTTCAACTCGGGATTTTTCTTGGA
. : . : . : . : . : . :
rJMSF012P24+ TTACGAGATGTATAGTAGCCTCGGTTTTCATGCTTCTCATGTTATGTACTTATGTTGTTG
rJMSF013I23+ TTACGAGATGTATAGTAGCCTCGGTTTTCATGCTTCTCATGTTATGTACTTATGTTGTTG
rJMSF048F09+ TTACGAGATGTATAGTAGCCTCGGTTTTCATGCTTCTCATGTTATGTACTTATGTTGTTG
rJMSF007N03+ TTACGAGATGTATAGTAGCCTCGGTTTTCATGCTTCTCATGTTATGTACTTATGTTGTTG
rJMFF030B20+ TTACGAGATGTATAGTAGCCTCGGTTTTCATGCTTCTCATGTTATGTACTTATGTTGTTG
____________________________________________________________
consensus TTACGAGATGTATAGTAGCCTCGGTTTTCATGCTTCTCATGTTATGTACTTATGTTGTTG
. : . : . : . : . : . :
rJMSF012P24+ TTCTATTGTTTTTGTCTGCATTTTTTTTTGTTTGTTTTCCATATATAAATGCTGCTCCTG
rJMSF013I23+ TTCTATTGTTTTTGTCTGCATTTTTTTTTGTTTGTTTTCCATATATAAATGCTGCTCCTG
rJMSF048F09+ TTCTATTGTTTTTGTCTGCATTTTTTTTTGTTTGTTTTCCATATATAAATGCTGCTCCTG
rJMSF007N03+ TTCTATTGTTTTTGTCTGCATTTTTTTTTGTTTGTTTTCCATATATAAATGCTGCTCCTG
rJMFF030B20+ TTCTATTGTTTTTGTCTGCATTTTTTTTTGTTTGTTTTCCATATATAAATGCTGCTCCTG
____________________________________________________________
consensus TTCTATTGTTTTTGTCTGCATTTTTTTTTGTTTGTTTTCCATATATAAATGCTGCTCCTG
. : . : . : . : . : . :
rJMSF012P24+ AAACTAGATTGTGTAAATGCAACAGAAGTTAGAACTCCAGAAGAGA
rJMSF013I23+ AAACTAGATTGTGTAAATGCAAC
rJMSF048F09+ AAACTAGATTGTGTAAATGCAACAGAAGTTAGAACTCCAGAAGAGA
rJMSF007N03+ AAACTAGATTGTGTAAATGCAACAGAAGTTAGAACTCCAGAAGAGA
rJMFF030B20+ AAACTAGATTGTGTAAATGCAACAGAAGTTAGAACTCCAGAAGAGATTGAGTGGGAGAAA
____________________________________________________________
consensus AAACTAGATTGTGTAAATGCAACAGAAGTTAGAACTCCAGAAGAGATTGAGTGGGAGAAA