Contig 006874:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021M05Sequence526003167 (3)ref|XP_009590876.1|4e-55PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tomentosiformis]698006874 (4)ref|XP_009773622.1|1e-68PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Nicotiana sylvest
JMFF022M22Sequence529003167 (3)ref|XP_009590876.1|4e-55PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tomentosiformis]757006874 (4)ref|XP_009590876.1|6e-101PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tomentosiformis]
JMFF024M16Sequence761006874 (4)ref|XP_009590876.1|6e-65PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tomentosiformis]
JMFF027J13Sequence541003167 (3)ref|XP_009590876.1|7e-58PREDICTED: vacuolar amino acid transporter 1-like [Nicotiana tomentosiformis]624006874 (4)ref|XP_009773622.1|6e-54PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Nicotiana sylvest

Alignment

This contig is upended


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rJMFF022M22+                                   GGTTACGTTTCTGGGGTCAATGCTGTGGGCTAGTG
                      ____________________________________________________________
consensus                                      GGTTACGTTTCTGGGGTCAATGCTGTGGGCTAGTG
 
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rJMFF022M22+          CGACAGATGGAATTGGTATTCATGCAGATGATGCCCTTGTTTATTGGAAGGGAATCCCCA
                      ____________________________________________________________
consensus             CGACAGATGGAATTGGTATTCATGCAGATGATGCCCTTGTTTATTGGAAGGGAATCCCCA
 
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rJMFF022M22+          CTGCTGTTAGCCTTTATTCCTTTTGTTACTGCGCTCATCCCGTTTTCCCCACTCTTTACA
rJMFF024M16+                            CCTTTTGTTACTGCGCTCATCCCGTTTTCCCCACTCTTTACA
                      ____________________________________________________________
consensus             CTGCTGTTAGCCTTTATTCCTTTTGTTACTGCGCTCATCCCGTTTTCCCCACTCTTTACA
 
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rJMFF022M22+          CTTCCATGGAAAATCCCACACAGTTCTCAAAGGTTCTGATTCTGTGCTTTCTAGCCTGCA
rJMFF024M16+          CTTCCATGGAAAATCCCACACAGTTCTCAAAGGTTCTGATTCTGTGCTTTCTAGCCTGCA
rJMFF021M05+                               AGTTCTCAAAGGTTCTGATTCTGTGCTTTCTAGCCTGCA
                      ____________________________________________________________
consensus             CTTCCATGGAAAATCCCACACAGTTCTCAAAGGTTCTGATTCTGTGCTTTCTAGCCTGCA
 
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rJMFF022M22+          CCATTAGCTATGCATCAATGGCCATTCTGGGCTACCTTATGTTCGGTCCAGACGTGCTAT
rJMFF024M16+          CCATTAGCTATGCATCAATGGCCATTCTGGGCTACCTTATGTTCGGTCCAGACGTGCTAT
rJMFF021M05+          CCATTAGCTATGCATCAATGGCCATTCTGGGCTACCTTATGTTCGGTCCAGACGTGCTAT
rJMFF027J13+                                             CTTATGTTCGGTCCAGACGTGCTAT
                      ____________________________________________________________
consensus             CCATTAGCTATGCATCAATGGCCATTCTGGGCTACCTTATGTTCGGTCCAGACGTGCTAT
 
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rJMFF022M22+          CTCAAGTGACCCTAAACCTCCCCA-CCCATAAAATCAGCTCCAAAGTGGCCATCCTCACC
rJMFF024M16+          CTCAAGTGACCCTAAACCTCCCCACCCCATAAAATCAGCTCCAAAGTGGCCATCCTCACC
rJMFF021M05+          CTCAAGTGACCCTAAACCTCCCCA-CCCATAAAATCAGCTCCAAAGTGGCCATCCTCACC
rJMFF027J13+          CTCAAGTGACCCTAAACCTCCCCA-CCCATAAAATCAGCTCCAAAGTGGCCATCCTCACC
                      ____________________________________________________________
consensus             CTCAAGTGACCCTAAACCTCCCCA-CCCATAAAATCAGCTCCAAAGTGGCCATCCTCACC
 
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rJMFF022M22+          ACACTCATCAACCCAATAGCCAAGTACGCCTTGATGGTGAAACCGCTAGTGAATGCGATG
rJMFF024M16+          ACACTCATCAACCCAATAGCCAAGTACGCCTTGATGGTGAAACCGCTAGTGAATGCGATG
rJMFF021M05+          ACACTCATCAACCCAATAGCCAAGTACGCCTTGATGGTGAAACCGCTAGTGAATGCGATG
rJMFF027J13+          ACACTCATCAACCCAATAGCCAAGTACGCCTTGATGGTGAAACCGCTAGTGAATGCGATG
                      ____________________________________________________________
consensus             ACACTCATCAACCCAATAGCCAAGTACGCCTTGATGGTGAAACCGCTAGTGAATGCGATG
 
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rJMFF022M22+          GAGAATTTGTCCGCATCCCATTGCAACAAGAAGGGGTGCAGCCTGGTGATCAGAACCAGC
rJMFF024M16+          GAGAATTTGTCCGCATCCCATTGCAACAAGAAGGGGTGCAGCCTGGTGATCAGAACCAGC
rJMFF021M05+          GAGAATTTGTCCGCATCCCATTGCAACAAGAAGGGGTGCAGCCTGGTGATCAGAACCAGC
rJMFF027J13+          GAGAATTTGTCCGCATCCCATTGCAACAAGAAGGGGTGCAGCCTGGTGATCAGAACCAGC
                      ____________________________________________________________
consensus             GAGAATTTGTCCGCATCCCATTGCAACAAGAAGGGGTGCAGCCTGGTGATCAGAACCAGC
 
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rJMFF022M22+          CTGGTAATCAGCACAGTGATTGTGGCCGTAGCCATTCCCCTTTTCGCCTACTTAATGTCA
rJMFF024M16+          CTGGTAATCAGCACAGTGATTGTGGCCGTAGCCATTCCCCTTTTCGCCTACTTAATGTCA
rJMFF021M05+          CTGGTAATCAGCACAGTGATTGTGGCCGTAGCCATTCCCCTTTTCGCCTACTTAATGTCA
rJMFF027J13+          CTGGTAATCAGCACAGTGATTGTGGCCGTAGCCATTCCCCTTTTCGCCTACTTAATGTCA
                      ____________________________________________________________
consensus             CTGGTAATCAGCACAGTGATTGTGGCCGTAGCCATTCCCCTTTTCGCCTACTTAATGTCA
 
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rJMFF022M22+          CTGGTGGGGGCGTTCTTGAGCATAACGGCATCCGTTATCCTGCCTTGCTTGTGCTTCTTG
rJMFF024M16+          CTGGTGGGGGCGTTCTTGAGCATAACGGCATCCGTTATCCTGCCTTGCTTGTGCTTCTTG
rJMFF021M05+          CTGGTGGGGGCGTTCTTGAGCATAACGGCATCCGTTATCCTGCCTTGCTTGTGCTTCTTG
rJMFF027J13+          CTGGTGGGGGCGTTCTTGAGCATAACGGCATCCGTTATCCTGCCTTGCTTGTGCTTCTTG
                      ____________________________________________________________
consensus             CTGGTGGGGGCGTTCTTGAGCATAACGGCATCCGTTATCCTGCCTTGCTTGTGCTTCTTG
 
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rJMFF022M22+          AAGATTTCTGGGATATACCGCACACTGGGGGTGGAGATGATAATGGTGTCTGGGATTATG
rJMFF024M16+          AAGATTTCTGGGATATACCGCACACTGGGGGTGGAGATGATAATGGTGTCTGGGATTATG
rJMFF021M05+          AAGATTTCTGGGATATACCGCACACTGGGGGTGGAGATGATAATGGTGTCTGGGATTATG
rJMFF027J13+          AAGATTTCTGGGATATACCGCACACTGGGGGTGGAGATGATAATGGTGTCTGGGATTATG
                      ____________________________________________________________
consensus             AAGATTTCTGGGATATACCGCACACTGGGGGTGGAGATGATAATGGTGTCTGGGATTATG
 
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rJMFF022M22+          GTAATGGGTGTAGCTATCATGGTTGTAGGTACTTACACGTCTGTGCTGGAAATTTATGGG
rJMFF024M16+          GTAATGGGTGTAGCTATCATGGTTGTAGGTACTTACACGTCTGTGCTGGAAATTTATGGG
rJMFF021M05+          GTAATGGGTGTAGCTATCATGGTTGTAGGTACTTACACGTCTGTGCTGGAAATTTATGGG
rJMFF027J13+          GTAATGGGTGTAGCTATCATGGTTGTAGGTACTTACACGTCTGTGCTGGAAATTTATGGG
                      ____________________________________________________________
consensus             GTAATGGGTGTAGCTATCATGGTTGTAGGTACTTACACGTCTGTGCTGGAAATTTATGGG
 
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rJMFF022M22+          CATTTGTAGACCAAATTGCTCTTGATGATAGGTGGTTAGAAAGGTGTTTGGC        
rJMFF024M16+          CATTTGTAGACCAAATTGCTCTTGATGATAGGTGGTTAGAAAGGTGTTTGGCTTCTCGGT
rJMFF021M05+          CATTTGTAGACCAAATTGCTCTTGATGATAGGTGGTTAGAAAGGTGTTTGGCTTCTCGGT
rJMFF027J13+          CATTTGTAGACCAAATTGCTCTTGATGATAGGTGGTTAGAAAGGTGTTTGGCTTCTCGGT
                      ____________________________________________________________
consensus             CATTTGTAGACCAAATTGCTCTTGATGATAGGTGGTTAGAAAGGTGTTTGGCTTCTCGGT
 
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rJMFF024M16+          TGTACAAGTTTTTTTTTAACATTTTGTTTTGGTTTGTTTTGTGTACGTGGAAGTCATATT
rJMFF021M05+          TGTACAAGTTTTTTTTTAACATTTTGTTTTGGTTTGTTTTGTGTACGTGGAAGTCATATT
rJMFF027J13+          TGTACAAGTTTTTTTTTAACATTTTGTTTTGGTTTGTTTTGTGTACGTGGAAGTCATATT
                      ____________________________________________________________
consensus             TGTACAAGTTTTTTTTTAACATTTTGTTTTGGTTTGTTTTGTGTACGTGGAAGTCATATT
 
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rJMFF024M16+          GTAAGCCATGTTAACATGATCTTAACTCTGAGGGTGTTTGGTTGACATAATT        
rJMFF021M05+          GTAAGCCATGTTAACATGATCTTAACTCTGAGGGTGTTTGGTTGACATAATT        
rJMFF027J13+          GTAAGCCATGTTAACATGATCTTAACTCTGAGGGTGTTTGGTTGACATAATTCAATTCAA
                      ____________________________________________________________
consensus             GTAAGCCATGTTAACATGATCTTAACTCTGAGGGTGTTTGGTTGACATAATTCAATTCAA