Contig 006869:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026M17Sequence576006869 (2)ref|XP_006341925.1|2e-63PREDICTED: uncharacterized protein LOC102585886 isoform X1 [Solanum tuberosum]693006869 (2)ref|XP_009767874.1|221PREDICTED: uncharacterized protein LOC104218945, partial [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFF026M17-                                       TGAGACTGCAAGCACTTCTGTTGCTCCAGCAT
                      ____________________________________________________________
consensus                                         TGAGACTGCAAGCACTTCTGTTGCTCCAGCAT
 
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JMFF026M17-           GGTCTACTGACTCTGGGAAAACCCCAAAACCCTCATCGTTGAGGGACATTCTGAAGGAAC
                      ____________________________________________________________
consensus             GGTCTACTGACTCTGGGAAAACCCCAAAACCCTCATCGTTGAGGGACATTCTGAAGGAAC
 
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JMFF026M17-           AGCAAAAGAAGGCTTCTACTGGTCCGCAGCATATTCCAGTGCCAACACCTCAGAAATCTG
                      ____________________________________________________________
consensus             AGCAAAAGAAGGCTTCTACTGGTCCGCAGCATATTCCAGTGCCAACACCTCAGAAATCTG
 
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JMFF026M17-           TCCCAACTCAACCTGCCCGAGGAGGCACTGGTTCATGGTCTCTTTCTGCTTCCTCTCCAT
                      ____________________________________________________________
consensus             TCCCAACTCAACCTGCCCGAGGAGGCACTGGTTCATGGTCTCTTTCTGCTTCCTCTCCAT
 
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JMFF026M17-           CCAAGGCTGCAACGCCAATTCAAGTTAATTTACAAGCTGCTTCACAATCCAAGACTCAAG
                      ____________________________________________________________
consensus             CCAAGGCTGCAACGCCAATTCAAGTTAATTTACAAGCTGCTTCACAATCCAAGACTCAAG
 
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JMFF026M17-           TAGAAGATGATTTCTTTTGGGGCCCAATAGATCAACCCAAGCAAGAAGCAAAGCAGTCTG
                      ____________________________________________________________
consensus             TAGAAGATGATTTCTTTTGGGGCCCAATAGATCAACCCAAGCAAGAAGCAAAGCAGTCTG
 
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JMFF026M17-           ATTTTCCCAATCTTGGAAACCATGGAAGTTGGGGAGTCAAGAATACCCCAGTGAAAGGGA
                      ____________________________________________________________
consensus             ATTTTCCCAATCTTGGAAACCATGGAAGTTGGGGAGTCAAGAATACCCCAGTGAAAGGGA
 
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JMFF026M17-           CTCTTGGTGGGTCATCTAGTAAGCAAAAGTCAATTGGCAGGCCCATGGAACGTGTAATGT
                      ____________________________________________________________
consensus             CTCTTGGTGGGTCATCTAGTAAGCAAAAGTCAATTGGCAGGCCCATGGAACGTGTAATGT
 
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JMFF026M17-           CTTCATCTCCTGCCTCAGCTCACTCATCTTTGAAAGGGAAGAAAGATTTCCAAACAAAGC
rJMFF026M17+                                     CTTTGAAAGGGAAGAAAGATTTCCAAACAAAGC
                      ____________________________________________________________
consensus             CTTCATCTCCTGCCTCAGCTCACTCATCTTTGAAAGGGAAGAAAGATTTCCAAACAAAGC
 
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JMFF026M17-           ACTCTGAAGCCATGGATTTCANAGAGTGGTGTGAGAGCGAGTGTGCGAGGCTTATTGGAT
rJMFF026M17+          ACTCTGAAGCCATGGATTTCAGAGAGTGGTGTGAGAGCGAGTGTGCGAGGCTTATTGGAT
                      ____________________________________________________________
consensus             ACTCTGAAGCCATGGATTTCAGAGAGTGGTGTGAGAGCGAGTGTGCGAGGCTTATTGGAT
 
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JMFF026M17-           CAAA                                                        
rJMFF026M17+          CAAAAGATACAAGTTTTCTAGAGTTCTGTTTGAAGCAATCCAGATCTGAGGCTGAAACAC
                      ____________________________________________________________
consensus             CAAAAGATACAAGTTTTCTAGAGTTCTGTTTGAAGCAATCCAGATCTGAGGCTGAAACAC
 
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rJMFF026M17+          TTCTGATTGAGAATCTAGGCTCTTTTGACCCTGACCATGAGTTTATTGAGAAGTTCCTAA
                      ____________________________________________________________
consensus             TTCTGATTGAGAATCTAGGCTCTTTTGACCCTGACCATGAGTTTATTGAGAAGTTCCTAA
 
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rJMFF026M17+          ACTACAAAGATTTCTTGCCTGCGGATGTTGTTGAGATTGCCTTTCAGAGACAGAATGATC
                      ____________________________________________________________
consensus             ACTACAAAGATTTCTTGCCTGCGGATGTTGTTGAGATTGCCTTTCAGAGACAGAATGATC
 
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rJMFF026M17+          GAAAGGTCACCGGAAAAGGTGCTGGAGATGTGACTTCTGACCCTGTTGGCATTGTAGAAG
                      ____________________________________________________________
consensus             GAAAGGTCACCGGAAAAGGTGCTGGAGATGTGACTTCTGACCCTGTTGGCATTGTAGAAG
 
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rJMFF026M17+          CTGGTGAGGGTGGTAACACTGGTGGTGCTCTGGATGTGGTTACGAAAGGGGGTGGAAAGA
                      ____________________________________________________________
consensus             CTGGTGAGGGTGGTAACACTGGTGGTGCTCTGGATGTGGTTACGAAAGGGGGTGGAAAGA
 
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rJMFF026M17+          AGAAAGGCAAGAAAGGGAAAAAGGTCAATCTTTCAGAGCTTGGATTTAACGTGGTTAGCA
                      ____________________________________________________________
consensus             AGAAAGGCAAGAAAGGGAAAAAGGTCAATCTTTCAGAGCTTGGATTTAACGTGGTTAGCA
 
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rJMFF026M17+          ATCGGATTATGATGGGAGAGATTCAGAGCATAGAAGATTAAGTAGTAGGGAGAGGATAAC
                      ____________________________________________________________
consensus             ATCGGATTATGATGGGAGAGATTCAGAGCATAGAAGATTAAGTAGTAGGGAGAGGATAAC
 
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rJMFF026M17+          AAACAGTTCAGGCTGTAAATACAGTTTGTTTTTTTTTGAGACTGTACATGCATGTTTAAC
                      ____________________________________________________________
consensus             AAACAGTTCAGGCTGTAAATACAGTTTGTTTTTTTTTGAGACTGTACATGCATGTTTAAC
 
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rJMFF026M17+          TTTAGAATTCATAGGGTGCAAAGGTAGCGGTGATATTTAAGCTGCTCAAGCAATTTTGTG
                      ____________________________________________________________
consensus             TTTAGAATTCATAGGGTGCAAAGGTAGCGGTGATATTTAAGCTGCTCAAGCAATTTTGTG
 
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rJMFF026M17+          GCCTTTTGCGCAGTGTTAGATCCTTTTGTTTGTTTTGACTGATGATGTTTCAACAAAGCG
                      ____________________________________________________________
consensus             GCCTTTTGCGCAGTGTTAGATCCTTTTGTTTGTTTTGACTGATGATGTTTCAACAAAGCG