| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008M17 | Sequence | 592 | 001635 (31) | ref|XP_009766589.1| | 3e-44 | PREDICTED: beta-galactosidase 8 [Nicotiana sylvestris] | 792 | 006857 (8) | ref|XP_009595284.1| | 8e-109 | PREDICTED: beta-galactosidase 8 [Nicotiana tomentosiformis] ref|XP_009595285.1| |
| JMFF016D14 | Sequence | 567 | 001635 (31) | ref|XP_011089316.1| | 2e-40 | PREDICTED: beta-galactosidase 8-like [Sesamum indicum] | 555 | 006857 (8) | ref|XP_010313192.1| | 1e-55 | PREDICTED: TBG5 protein isoform X1 [Solanum lycopersicum] ref|XP_010313193.1| PR |
| JMFF022I14 | Sequence | 475 | 001635 (31) | ref|XP_009766589.1| | 1e-18 | PREDICTED: beta-galactosidase 8 [Nicotiana sylvestris] | 750 | 006857 (8) | ref|XP_009595284.1| | 9e-102 | PREDICTED: beta-galactosidase 8 [Nicotiana tomentosiformis] ref|XP_009595285.1| |
| JMFF026D11 | Sequence | 529 | 001635 (31) | ref|NP_001234312.1| | 2e-31 | TBG5 protein precursor [Solanum lycopersicum] gb|AAF70824.1|AF154423_1 putative | 630 | 006857 (8) | ref|NP_001234312.1| | 3e-56 | TBG5 protein precursor [Solanum lycopersicum] gb|AAF70824.1|AF154423_1 putative |
| JMFF035H20 | Sequence | 597 | 001635 (31) | ref|XP_009766589.1| | 1e-50 | PREDICTED: beta-galactosidase 8 [Nicotiana sylvestris] | 750 | 006857 (8) | ref|XP_009595284.1| | 2e-96 | PREDICTED: beta-galactosidase 8 [Nicotiana tomentosiformis] ref|XP_009595285.1| |
| JMFF039N19 | Sequence | 532 | 001635 (31) | ref|XP_010313192.1| | 3e-32 | PREDICTED: TBG5 protein isoform X1 [Solanum lycopersicum] ref|XP_010313193.1| PR | 734 | 006857 (8) | ref|XP_009595284.1| | 1e-103 | PREDICTED: beta-galactosidase 8 [Nicotiana tomentosiformis] ref|XP_009595285.1| |
| JMFF041E17 | Sequence | 636 | 001635 (31) | ref|XP_009766589.1| | 3e-56 | PREDICTED: beta-galactosidase 8 [Nicotiana sylvestris] | 547 | 006857 (8) | ref|XP_010313192.1| | 4e-59 | PREDICTED: TBG5 protein isoform X1 [Solanum lycopersicum] ref|XP_010313193.1| PR |
| JMSF034L16 | Sequence | 718 | 001635 (31) | ref|XP_011089316.1| | 3e-76 | PREDICTED: beta-galactosidase 8-like [Sesamum indicum] | 740 | 006857 (8) | ref|XP_009595284.1| | 1e-110 | PREDICTED: beta-galactosidase 8 [Nicotiana tomentosiformis] ref|XP_009595285.1| |
This contig is upended
. : . : . : . : . : . :
rJMSF034L16+ C
rJMFF008M17+ TACAAGGCCAATTTTGATGCCCCCTGGCGGTGATAGCC
____________________________________________________________
consensus TACAAGGCCAATTTTGATGCCCCCTGGCGGTGATAGCC
. : . : . : . : . : . :
rJMSF034L16+ CCGCTTGCTATAGATTTCACGGGGATGGG-AAAGGGGGTGGCATGGGTAAAT-GGACAAA
rJMFF008M17+ CCGCTTGCTATAGATTTCACGGGGATGGG-AAAGGGGGTGGCATGGGTAAAT-GGACAAA
rJMFF035H20+ TATAGATTTCACGGGGATGGGAAAGGGGGGTGGCATGGGTAAATGGGACAAA
rJMFF039N19+ GAAAGGGGGTGGCATGGGTAAAT-GGACAAA
rJMFF022I14+ GAAAGGGGGTGGCATGGGTAAAT-GGACAAA
____________________________________________________________
consensus CCGCTTGCTATAGATTTCACGGGGATGGGGAAAGGGGGTGGCATGGGTAAAT-GGACAAA
. : . : . : . : . : . :
rJMSF034L16+ GCATTGGGCGGTACTGGCCAACGTATACTGCTTCAAATGGTGGTTGCACTGATTCGTGTA
rJMFF008M17+ GCATTGGGCGGTACTGGCCAACGTATACTGCTTCAAATGGTGGTTGCACTGATTCGTGTA
rJMFF035H20+ GCATTGGGCGGTACTGGCCAACGTATACTGCTTCAAATGGTGGTTGCACTGATTCGTGTA
rJMFF039N19+ GCATTGGGCGGTACTGGCCAACGTATACTGCTTCAAATGGTGGTTGCACTGATTCGTGTA
rJMFF022I14+ GCATTGGGCGGTACTGGCCAACGTATACTGCTTCAAATGGTGGTTGCACTGATTCGTGTA
____________________________________________________________
consensus GCATTGGGCGGTACTGGCCAACGTATACTGCTTCAAATGGTGGTTGCACTGATTCGTGTA
. : . : . : . : . : . :
rJMSF034L16+ ACTACAGAGGACCCTATAATTCTGACAAATGCCTCAGGAATTGTGGAAAGCCTTCTCAGA
rJMFF008M17+ ACTACAGAGGACCCTATAATTCTGACAAATGCCTCAGGAATTGTGGAAAGCCTTCTCAGA
rJMFF035H20+ ACTACAGAGGACCCTATAATTCTGACAAATGCCTCAGGAATTGTGGAAAGCCTTCTCAGA
rJMFF039N19+ ACTACAGAGGACCCTATAATTCTGACAAATGCCTCAGGAATTGTGGAAAGCCTTCTCAGA
rJMFF026D11+ TATAANTCTGACAAATGCGTCAGGAATTGTGGAAAGCCTTCTCAGA
rJMFF022I14+ ACTACAGAGGACCCTATAATTCTGACAAATGCCTCAGGAATTGTGGAAAGCCTTCTCAGA
____________________________________________________________
consensus ACTACAGAGGACCCTATAATTCTGACAAATGCCTCAGGAATTGTGGAAAGCCTTCTCAGA
. : . : . : . : . : . :
rJMSF034L16+ CTTATTACCATGTTCCTCGTTCGTGGCTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
rJMFF008M17+ CTTATTACCATGTTCCTCGTTCGTGGCTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
rJMFF035H20+ CTTATTACCATGTTCCTCGTTCGTGGCTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
rJMFF039N19+ CTTATTACCATGTTCCTCGTTCGTGGCTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
rJMFF041E17+ CTAGTGGTATTTG
rJMFF026D11+ NTTATTACCATGTTCNTNGTTNGTGGGTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
rJMFF016D14+ TAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
rJMFF022I14+ CTTATTACCATGTTCCTCGTTCGTGGCTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
____________________________________________________________
consensus CTTATTACCATGTTCCTCGTTCGTGGCTAAAATCGAGTGGAAATGTGCTAGTGGTATTTG
. : . : . : . : . : . :
rJMSF034L16+ AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
rJMFF008M17+ AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
rJMFF035H20+ AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
rJMFF039N19+ AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
rJMFF041E17+ AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
rJMFF026D11+ AGGAAGTTGNTGGAGATCCANCCAAGCTATCATTNGCANCTAGAGAGGTAGGAAGTNTAT
rJMFF016D14+ AGGAAGTTGNTGGAGATCCAACCAAGCTATCATTNGCAACTAGAGAGGTAGGAAGTCTAT
rJMFF022I14+ AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
____________________________________________________________
consensus AGGAAGTTGGTGGAGATCCAACCAAGCTATCATTTGCAACTAGAGAGGTAGGAAGTCTAT
. : . : . : . : . : . :
rJMSF034L16+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
rJMFF008M17+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
rJMFF035H20+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
rJMFF039N19+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
rJMFF041E17+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
rJMFF026D11+ GNTCAAGAGTTTCGGAGTCTCACCCAATGCCNGTAGACATGTGGANTTCAGACCTATCGG
rJMFF016D14+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
rJMFF022I14+ GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
____________________________________________________________
consensus GCTCAAGAGTTTCGGAGTCTCACCCAATGCCCGTAGACATGTGGACTTCAGACCTATCGG
. : . : . : . : . : . :
rJMSF034L16+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
rJMFF008M17+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
rJMFF035H20+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
rJMFF039N19+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
rJMFF041E17+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
rJMFF026D11+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTNGAGTGCCCTCTTTNTAACCAAGTGATTT
rJMFF016D14+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTNGAGTGCCNTCTTTNTAACCAAGTGATTT
rJMFF022I14+ GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
____________________________________________________________
consensus GGCAAAAACAAGAAGGTGCAGCGCTCTCTCTCGAGTGCCCTCTTTCTAACCAAGTGATTT
. : . : . : . : . : . :
rJMSF034L16+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
rJMFF008M17+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
rJMFF035H20+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
rJMFF039N19+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
rJMFF041E17+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
rJMFF026D11+ CANCGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGNGGAAGTTNTAGCCATG
rJMFF016D14+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGNGGAAGTTTTAGCCATG
rJMFF022I14+ CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
____________________________________________________________
consensus CAACGATAAAATTTGCAAGCTTTGGCACTCCTCAAGGGACTTGTGGAAGTTTTAGCCATG
. : . : . : . : . : . :
rJMSF034L16+ GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
rJMFF008M17+ GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
rJMFF035H20+ GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
rJMFF039N19+ GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
rJMFF041E17+ GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGGA
rJMFF026D11+ GTAAATGCAGGAGCACCAACGCTNTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
rJMFF016D14+ GTAAATGCAGGAGCACCAACGCTNTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
rJMFF022I14+ GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
____________________________________________________________
consensus GTAAATGCAGGAGCACCAACGCTCTTTCTGTTGTAAAGAAGGCTTGCATTGGATTGCGAA
. : . : . : . : . : . :
rJMSF034L16+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
rJMFF008M17+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
rJMFF035H20+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
rJMFF039N19+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
rJMFF041E17+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
rJMFF026D11+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGNGCAGGAGTTACAAAGA
rJMFF016D14+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTNCAGGAGTTACAAAGA
rJMFF022I14+ ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
____________________________________________________________
consensus ACTGCTCTCTTGGAGTCTCGAGCACCACATTTGGCAATCCGTGTGCAGGAGTTACAAAGA
. : . : . : . : . : . :
rJMSF034L16+ GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
rJMFF008M17+ GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
rJMFF035H20+ GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
rJMFF039N19+ GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
rJMFF041E17+ GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
rJMFF026D11+ GTTTAGCTGTAGAAGNTTCTNGTGCCTAAGGCACCTTGTGTAGGTATTNGTGAAACGNGA
rJMFF016D14+ GTTTAGCTGTAGAAGNTTCTNGTGCCTAAGGCACCTTGTGTAGGTATTNGTGAAACGCGA
rJMFF022I14+ GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
____________________________________________________________
consensus GTTTAGCTGTAGAAGCTTCTTGTGCCTAAGGCACCTTGTGTAGGTATTTGTGAAACGCGA
. : . : . : . : . : . :
rJMSF034L16+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF008M17+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF035H20+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF039N19+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF041E17+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF026D11+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF016D14+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
rJMFF022I14+ AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
____________________________________________________________
consensus AATTTCAACATAAAATGAAAACGAATAAAAGAATGAAAAAGAAATAGAAGAAGAAAAAGA
. : . : . : . : . : . :
rJMSF034L16+ AGAAACTT
rJMFF008M17+ AGAAACTTGTACTCCCTGTTACCATATC
rJMFF035H20+ AGAAACTTGTACTCCCTGTTACCATATC
rJMFF039N19+ AGAAACTTGTACTCCCTGTTACCATATC
rJMFF041E17+ AGAAACTTGTACTCCCTGTTACCATATCTGAAAGAAATGAATTATCTT
rJMFF026D11+ AGNAACTTGNACTCCCTGNTACCATATCTGAAAGAAA
rJMFF016D14+ AGAAACTTGTACTCCCTGNTACCATATCTGAAAGAAA
rJMFF022I14+ AGAAACTTGTACTCCCTGTTACCATATCTGAAAGAAATGAATTATCTTGAATCAAGAAGC
____________________________________________________________
consensus AGAAACTTGTACTCCCTGTTACCATATCTGAAAGAAATGAATTATCTTGAATCAAGAAGC