Contig 006856:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022G22Sequence498006856 (4)ref|XP_009606595.1|3e-80PREDICTED: SUMO-conjugating enzyme SCE1-like [Nicotiana tomentosiformis]735006856 (4)ref|XP_009606595.1|2e-69PREDICTED: SUMO-conjugating enzyme SCE1-like [Nicotiana tomentosiformis]
JMFN017I20Sequence538006856 (4)ref|XP_009606595.1|3e-72PREDICTED: SUMO-conjugating enzyme SCE1-like [Nicotiana tomentosiformis]
JMSF033F09Sequence603021107ref|XP_004248798.1|3e-26PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycop642006856 (4)ref|XP_009606595.1|6e-92PREDICTED: SUMO-conjugating enzyme SCE1-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF022G22-                       AAGAAAGCCTATTCATAGTTTCACGTTCATCAAAGAAGCCTGAGCATC
rJMSF033F09+                                    ATAGTTTCACGTTCATCAAAGAAGCCTGAGCATC
                      ____________________________________________________________
consensus                         AAGAAAGCCTATTCATAGTTTCACGTTCATCAAAGAAGCCTGAGCATC
 
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JMFF022G22-           AAGCACAAGCAGAGGGGGAAGGAGCAAAAATGTCAGGCGGTATAGCGCGTGGTCGTCTCG
rJMSF033F09+          AAGCACAAGCAGAGGGGGAAGGAGCAAAAATGTCAGGCGGTATAGCGCGTGGTCGTCTCG
                      ____________________________________________________________
consensus             AAGCACAAGCAGAGGGGGAAGGAGCAAAAATGTCAGGCGGTATAGCGCGTGGTCGTCTCG
 
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JMFF022G22-           CCGAGGAGCGCAAAACCTGGAGGAAGAATCACCCTCATGGTTTTGTAGCGAAGCCGGAGA
rJMSF033F09+          CCGAGGAGCGCAAAACCTGGAGGAAGAATCACCCTCATGGTTTTGTAGCGAAGCCGGAGA
JMFN017I20-                                                        TAGCGAAGCCGGAGA
rJMFF022G22+                                                       TAGCGAAGCCGGAGA
                      ____________________________________________________________
consensus             CCGAGGAGCGCAAAACCTGGAGGAAGAATCACCCTCATGGTTTTGTAGCGAAGCCGGAGA
 
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JMFF022G22-           CCGGTGCGGATGGGTCCGTCAATTTGATGGTTTGGCATTGCGTTATCCCTGGTAAAACAG
rJMSF033F09+          CCGGTGCGGATGGGTCCGTCAATTTGATGGTTTGGCATTGCGTTATCCCTGGTAAAACAG
JMFN017I20-           CCGGTGCGGATGGGTCCGTCAATTTGATGGTTTGGCATTGCGTTATCCCTGGTAAAACAG
rJMFF022G22+          CCGGTGCGGATGGGTCCGTCAATTTGATGGTTTGGCATTGCGTTATCCCTGGTAAAACAG
                      ____________________________________________________________
consensus             CCGGTGCGGATGGGTCCGTCAATTTGATGGTTTGGCATTGCGTTATCCCTGGTAAAACAG
 
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JMFF022G22-           GGACTGACTGGGAAGGCGGCTACTATCCACTCACGATGCATTTTAGTGAAGACTATCCAA
rJMSF033F09+          GGACTGACTGGGAAGGCGGCTACTATCCACTCACGATGCATTTTAGTGAAGACTATCCAA
JMFN017I20-           GGACTGACTGGGAAGGCGGCTACTATCCACTCACGATGCATTTTAGTGAAGACTATCCAA
rJMFF022G22+          GGACTGACTGGGAAGGCGGCTACTATCCACTCACGATGCATTTTAGTGAAGACTATCCAA
                      ____________________________________________________________
consensus             GGACTGACTGGGAAGGCGGCTACTATCCACTCACGATGCATTTTAGTGAAGACTATCCAA
 
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JMFF022G22-           GCAAGCCCCCAAAATGCAAGTTTCCTCCAGGCTTCTTCCATCCTAATGTGTATCCATCTG
rJMSF033F09+          GCAAGCCCCCAAAATGCAAGTTTCCTCCAGGCTTCTTCCATCCTAATGTGTATCCATCTG
JMFN017I20-           GCAAGCCCCCAAAATGCAAGTTTCCTCCAGGCTTCTTCCATCCTAATGTGTATCCATCTG
rJMFF022G22+          GCAAGCCCCCAAAATGCAAGTTTCCTCCAGGCTTCTTCCATCCTAATGTGTATCCATCTG
                      ____________________________________________________________
consensus             GCAAGCCCCCAAAATGCAAGTTTCCTCCAGGCTTCTTCCATCCTAATGTGTATCCATCTG
 
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JMFF022G22-           GAACTGTATGCCTGTCTATTCTCAACGAGGATAGTGGTTGGAGGCCAGCTATTACAGTGA
rJMSF033F09+          GAACTGTATGCCTGTCTATTCTCAACGAGGATAGTGGTTGGAGGCCAGCTATTACAGTGA
JMFN017I20-           GAACTGTATGCCTGTCTATTCTCAACGAGGATAGTGGTTGGAGGCCAGCTATTACAGTGA
rJMFF022G22+          GAACTGTATGCCTGTCTATTCTCAACGAGGATAGTGGTTGGAGGCCAGCTATTACAGTGA
                      ____________________________________________________________
consensus             GAACTGTATGCCTGTCTATTCTCAACGAGGATAGTGGTTGGAGGCCAGCTATTACAGTGA
 
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JMFF022G22-           AGCAAATTGTAGTGGGTATCCAAGATTTGTTGGATCAGCCAAACCCCAATGATCCTGCAC
rJMSF033F09+          AGCAAATTGTAGTGGGTATCCAAGATTTGTTGGATCAGCCAAACCCCAATGATCCTGCAC
JMFN017I20-           AGCAAATTGTAGTGGGTATCCAAGATTTGTTGGATCAGCCAAACCCCAATGATCCTGCAC
rJMFF022G22+          AGCAAATTGTAGTGGGTATCCAAGATTTGTTGGATCAGCCAAACCCCAATGATCCTGCAC
                      ____________________________________________________________
consensus             AGCAAATTGTAGTGGGTATCCAAGATTTGTTGGATCAGCCAAACCCCAATGATCCTGCAC
 
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JMFF022G22-           AAACCGATGGCTACCAGCTATTCATTCAGG                              
rJMSF033F09+          AAACCGATGGCTACCAGCTATTCATTCAGGAAACAGGGGAGTACAAGAAAAGGGTCAAGC
JMFN017I20-           AAACCGATGGCTACCAGCTATTCATTCAGGAAACAGGGGAGTACAAGAAAAGGGTCAAGC
rJMFF022G22+          AAACCGATGGCTACCAGCTATTCATTCAGGAAACAGGGGAGTACAAGAAAAGGGTCAAGC
                      ____________________________________________________________
consensus             AAACCGATGGCTACCAGCTATTCATTCAGGAAACAGGGGAGTACAAGAAAAGGGTCAAGC
 
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rJMSF033F09+          AGCAGGCCAAGCAATACCCGACTATTATCTAGTACTCTTGTGGTATTGTTGTTATATACT
JMFN017I20-           AGCAGGCCAAGCAATACCCGACTATTATCTAGTACTCTTGTGGTATTGTTGTTATATACT
rJMFF022G22+          AGCAGGCCAAGCAATACCCGACTATTATCTAGTACTCTTGTGGTATTGTTGTTATATACT
                      ____________________________________________________________
consensus             AGCAGGCCAAGCAATACCCGACTATTATCTAGTACTCTTGTGGTATTGTTGTTATATACT
 
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rJMSF033F09+          CCGTATTTTGTAAGTATATTAGACAGACATAACTGTTGCTTGGT                
JMFN017I20-           CCGTATTTTGTAAGTATATTAGACAGACATAACTGTTGCTTGGTTGTTAGAAAGAGACAT
rJMFF022G22+          CCGTATTTTGTAAGTATATTAGACAGACATAACTGTTGCTTGGTTGTTAGAAAGAGACAT
                      ____________________________________________________________
consensus             CCGTATTTTGTAAGTATATTAGACAGACATAACTGTTGCTTGGTTGTTAGAAAGAGACAT
 
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JMFN017I20-           TTGCAGTCCTCAAATGAATAGTGTCACCATTCTGCA                        
rJMFF022G22+          TTGCAGTCCTCAAATGAATAGTGTCACCATTCTGCAAAAAACTTGATCTTGTCTCTGACT
                      ____________________________________________________________
consensus             TTGCAGTCCTCAAATGAATAGTGTCACCATTCTGCAAAAAACTTGATCTTGTCTCTGACT
 
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rJMFF022G22+          AAGGTTTGAAAGTGCATATGTTAGATCTGCAACTTATCCTATGTTTTGATTGCTTTGAAT
                      ____________________________________________________________
consensus             AAGGTTTGAAAGTGCATATGTTAGATCTGCAACTTATCCTATGTTTTGATTGCTTTGAAT
 
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rJMFF022G22+          ACCTCAGTCTCAAGGACATTGTCATGTCTTTTACTAGTAAAGTTCCTCTAAGCATTAGCC
                      ____________________________________________________________
consensus             ACCTCAGTCTCAAGGACATTGTCATGTCTTTTACTAGTAAAGTTCCTCTAAGCATTAGCC
 
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rJMFF022G22+          CAGTAACTTGGTTCAATTAGTAAGTGAGAATTAGTTCGTGTATCTATTTATTGGTACGAT
                      ____________________________________________________________
consensus             CAGTAACTTGGTTCAATTAGTAAGTGAGAATTAGTTCGTGTATCTATTTATTGGTACGAT